BGIOSGA009300

From RiceWiki
Revision as of 03:29, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA009300| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA009300, complete gene.| tag = OJ1202_...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA009300

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA009300, complete gene.

LocusTag

OJ1202_E07.12

Ensembl Transcript ID

BGIOSGA009300-TA

Ensembl Protein ID

BGIOSGA009300-PA

Length

3833

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:37316384..37320216

Sequence Coding Region

37316384..37316537,37316652..37317129,37317659..37317758,37318336..37318639,37318717..37319042
,37319700..37319796,37319885..37320216

Genome Context

<gbrowseImage1> name=IndicaChromosome02:37316384..37320216 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:37316384..37320216 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGGCAAGAAGAGCAAGAACGGCGGCGGCGGAGGAGGCGAGAAGAAGGCGACGACGACGACGGAGGTGGTGCTGACGGTGGCCATGCACTGCAAATGCAACGGCTGCAAGGACAAGATCCGTAATGGCGTCAAGGAACTCGCCCTCGTCCCAGGGGTGGAGGCGGTGGACAAGTCGGCGGTGGAGAGCAAAGGGGAGGTGAGGCTGGTGGTGGCCGCCGCGACGGCGAAGCCCGAGAAGCTCAAGGACCGCCTCCACAGGGTCACCGGCAAGAAGGTCGACCTCCTCGTCATCCCGCCGCCCAAGCCTGCCGCCGCCGCCGCCGACGACGACAAGGCCGCCGCCGCCGAAGCGGTTGCTGCGCTGATCAGGCAGGCCCAGGCGCAGGCGCAAGCGCAGGCGGGCGTCCATGTCGTCCCGGGCGCGTGGGCAGGCGGCGGCGCGGTGGCGTACCCGGCGTGGGGAATGCAGCAGGTGCAGCAGCCGGAGGGCGGCGGGTACTACTACTCGCCGTCGACTTACCCTGCAGGCGGCTTGGTCTACCCCTACGCGGCGGCGGCGGCGTATCCACCTCCCGGTCAGCAGCTGCTCGGCAATGGCGGCGGCGGCTACGGCGGCGTGGTGTCGCCATGCAGCAGGGGCAGGGGAATTGAGGCCAAGATGAATCGAATTGACCATGGTGGTGGTTGGTGTCTGTCTTTTGTACTTGTACTTGAGGATGATCTCTCGCTGAAGAAGAAGCGCACCGGCGGCGGCGGCGAGCAGTCGAAGCCTGCGTCCGACGTCGCGGAGGACAAGCCCGCCGAGGACACCTCGCCCGATGTGCAGCAGCCGCACCTCAACCCCACCACCACCACGGCGGCGCCGGGGACGGACGACAAGGACGCCTCCACCAAGGCCGACGACCCCAAGAAGGACGCCAAGGAGAAGGAGAAGAAGCCGGCGGCGCTCCCCGTGGTCACCGCCGTGCTCAAGGTCGACATGCACTGCGACGGCTGCGCCAAACGCATCCGCGCATCCATCCGACACTACCCAGGTGTGGAGGGCGTGGCGATGGAGGTGGACAAGGGCACCATGACGGTGGTCGGCCGCTTCGACGCCAAGAAGCTCCGCGATCGCGTCGCCAACAAGACCAAGAAGAAGGTCGACCTCCTCCCCAACAACAAAAAGGCTGGAGACGACAACGACAACAAGAACAACAAGGCCAACGAATGCGACGGCAAGCCGGCGGACAAGAAGCAGCAGCAGCAGGAGGACGACGGCGACGAGGCGGGGAAGGAAGACAAGAAGAAGAAGAAGGAGAAGGAGGAGCAAGACGATCAGAAGAAGAAGAAGGCCAAGGACAAGAAGAAACCCGTCGTGCCGGTGCCTGGGACGGTGGTGCTCAAGATCGGCGCCGTCGGCCTCCACTGCGACGGCTGCATGAACCGCATCCGCACCAAGCTCTTCCACATCCAAGGAGTGGAGCAGGTGGCCATGGAGATGGCCAAGAACCAGGTGACGGTGACCGGGACCATGGACATCAAGGCCCTGCCGGAGAAGCTCCGCAAGAAGCTGCGCCGCCCCGTCGACGTCGTGCCGCCGGGCAAGCAGAAGGACAAGGACGGCGGCAAGGACAAGGAGAAGCAGGACGGTGGCAAGGACGGCGGCGGCGGCGGCAAGGACGCGGCGGCGAAGGCGCTGACGGCGGAGAAGGAGGCGTGGAAGGCGGCGTTCTACGACCAGCAGGCGCTGCTCGCCACCGAGTTCATGCTCAGCGACGAGAACCCCAATGCCTGCTCCATCGCCTGA</cdnaseq>

Protein Sequence

<aaseq>MGKKSKNGGGGGGEKKATTTTEVVLTVAMHCKCNGCKDKIRNGVKELALVPGVEAVDKSAVESKGEVRLVVAAATAKPEKLKDRLHRVTGKKVDLLVIPPPKPAAAAADDDKAAAAEAVAALIRQAQAQAQAQAGVHVVPGAWAGGGAVAYPAWGMQQVQQPEGGGYYYSPSTYPAGGLVYPYAAAAAYPPPGQQLLGNGGGGYGGVVSPCSRGRGIEAKMNRIDHGGGWCLSFVLVLEDDLSLKKKRTGGGGEQSKPASDVAEDKPAEDTSPDVQQPHLNPTTTTAAPGTDDKDASTKADDPKKDAKEKEKKPAALPVVTAVLKVDMHCDGCAKRIRASIRHYPGVEGVAMEVDKGTMTVVGRFDAKKLRDRVANKTKKKVDLLPNNKKAGDDNDNKNNKANECDGKPADKKQQQQEDDGDEAGKEDKKKKKEKEEQDDQKKKKAKDKKKPVVPVPGTVVLKIGAVGLHCDGCMNRIRTKLFHIQGVEQVAMEMAKNQVTVTGTMDIKALPEKLRKKLRRPVDVVPPGKQKDKDGGKDKEKQDGGKDGGGGGKDAAAKALTAEKEAWKAAFYDQQALLATEFMLSDENPNACSIA</aaseq>

Gene Sequence

<dnaseqindica>1..154#269..746#1276..1375#1953..2256#2334..2659#3317..3413#3502..3833#ATGGGCAAGAAGAGCAAGAACGGCGGCGGCGGAGGAGGCGAGAAGAAGGCGACGACGACGACGGAGGTGGTGCTGACGGTGGCCATGCACTGCAAATGCAACGGCTGCAAGGACAAGATCCGTAATGGCGTCAAGGAACTCGCCCTCGTCCCAGGTACTACACTACTCCACTATACTCGATTAATCGATCGATTGATTGATTGCTGATTGATCGGCCGGTGAGAAGTGATGGTGATGAGAGTGATTGATCGATATGCGATGCGTGCAGGGGTGGAGGCGGTGGACAAGTCGGCGGTGGAGAGCAAAGGGGAGGTGAGGCTGGTGGTGGCCGCCGCGACGGCGAAGCCCGAGAAGCTCAAGGACCGCCTCCACAGGGTCACCGGCAAGAAGGTCGACCTCCTCGTCATCCCGCCGCCCAAGCCTGCCGCCGCCGCCGCCGACGACGACAAGGCCGCCGCCGCCGAAGCGGTTGCTGCGCTGATCAGGCAGGCCCAGGCGCAGGCGCAAGCGCAGGCGGGCGTCCATGTCGTCCCGGGCGCGTGGGCAGGCGGCGGCGCGGTGGCGTACCCGGCGTGGGGAATGCAGCAGGTGCAGCAGCCGGAGGGCGGCGGGTACTACTACTCGCCGTCGACTTACCCTGCAGGCGGCTTGGTCTACCCCTACGCGGCGGCGGCGGCGTATCCACCTCCCGGTCAGCAGCTGCTCGGCAATGGCGGCGGCGGCTACGGCGGCGTGGTGTCGCCATGGTACACGCATGGCTACTAGCTTAGTACATTGGTAGTATTAATTAGCAATGTTTGTTTTGTGATTAGTATCGATACTCTACTTGTATCCAGATGAGTATCAGTAGTGGATCGAGCAGGAGAATACTCCAGTTAGTAATGGTGGTTGTCATCTATAGTTAATTTTGGTTGGTGATGAGGCTCATGTGTGTGCACATGTAGTGGTGATTATAACAAGTGTGTCTCATCGGAACTGATGGTATTATACGTAGAATCGGGATCGTATTCGGATTCCAGTTGCCAACCTTCCCCTGTTTGAAATCATCATTATACTATGTGATGATATGCTATACTACGAAGCAAAAAAGGCTTTTGGATTCGGATCATGGTGTTGCATTGGCAGGCAGTGGGCATGTACACCGGCCGGCTGGAGCGGAACGAGAGCCCAAAAAAGTTTGATTTGGCCTCCTCTCCATGGTCTGGCTGGCCTGGCCAGCTTCTTTCTACAGTAGTAGTAGTACCATCTTTGTGTTCTGGTTCCTGTGTTGTGCAGCAGCAGGGGCAGGGGAATTGAGGCCAAGATGAATCGAATTGACCATGGTGGTGGTTGGTGTCTGTCTTTTGTACTTGTACTTGAGGATGATCTCTCGCTGGTGCCAATCCGTCCGTCGCCACGATCTCACCAACAGTATGTTGTACTACGTGGTGCTACTCCTTAGTTGTAGTGATTCTCAACACGAACAGCAGCAGCAATTATATCGTTGATGATCGGCCTTTACGTACGGAAGGAAGTGGGTCCCTGTGTCAGTCTCCACCCCAACCACTATCATCGTGCCTGTCATCTGCATGCGTACGAACGGACGGCTCCGATCGATTCGCCCGCCTCCTCCCCAGAAAAAACGAATCGTGAAAACACCCACACACGACTTGCGTTTTTGTCTCTGCTCTCTTCTGCTGCTGCTGCTGGTGGGTCCCGGTCCCACCACCACCCTCGCCGCAAAAAGGCAACCAAAACCCCCATCACAATTCACAAGCCTAAAACCCCCCCTCCCTCGCCGTCTCGCCGCCGCACACAACACAACACCACACCTCGCCATCGGAGCAGAGGTCGAGGAGGCGGAGGAGAAGCCGCCATGGCAAAGGTAATCACCTAGGTCTACCTTCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCATCGCATTGCGCTACTCATCGTCTCAATTGCAGAAGAAGAAGCGCACCGGCGGCGGCGGCGAGCAGTCGAAGCCTGCGTCCGACGTCGCGGAGGACAAGCCCGCCGAGGACACCTCGCCCGATGTGCAGCAGCCGCACCTCAACCCCACCACCACCACGGCGGCGCCGGGGACGGACGACAAGGACGCCTCCACCAAGGCCGACGACCCCAAGAAGGACGCCAAGGAGAAGGAGAAGAAGCCGGCGGCGCTCCCCGTGGTCACCGCCGTGCTCAAGGTCGACATGCACTGCGACGGCTGCGCCAAACGCATCCGCGCATCCATCCGACACTACCCAGGTCAGCTTTCCATCCATCCTCTGCTTCGATTTCATCTCTTCTAATCCTCCTCTGCTCCATCTCCATCGATCGAACAGGTGTGGAGGGCGTGGCGATGGAGGTGGACAAGGGCACCATGACGGTGGTCGGCCGCTTCGACGCCAAGAAGCTCCGCGATCGCGTCGCCAACAAGACCAAGAAGAAGGTCGACCTCCTCCCCAACAACAAAAAGGCTGGAGACGACAACGACAACAAGAACAACAAGGCCAACGAATGCGACGGCAAGCCGGCGGACAAGAAGCAGCAGCAGCAGGAGGACGACGGCGACGAGGCGGGGAAGGAAGACAAGAAGAAGAAGAAGGAGAAGGAGGAGCAAGACGATCAGAAGAAGAAGAAGGCCAAGGACAAGAAGAAACCCGTCGTGGTGCGTATGATACTAATAACCTTCCCTTCCGTTCATGTTCATCGTCTAAATTCGATTTGACTGAATTGTTCCCCGTTGTTCGCGTGAATTTCGTTGGAGTTTGTTTCGATCTGTTCCAGCGAATTTTCTGTGCCACCTATAGTCCTACTAGTACCATATTCTGCCTTGCTTGCAGAATTCCATTGTGTCGTGTTGCTGGTTCATGTGTTGCTGCATTCTGATATGATTCTCCACAAAAAGCTAGCGTGAGATGCTGCGGGGAGAGAGAGAGAGAGAGTCCGTGTGTTGCATGAGCCTTTGCTCTCCTTTTTCCTCCCTGAAAAGAAAGAAAGAAAGAAAGCTGTAGTACGCAGCAGCAGCAGCAGAATGGTTGCCTGCCTTGTTTGAGCTTTTGCCACCATGCAAAGGAACAGTAAACCACACCCTCTCTACATGCCAATGCCATGCATGCATCTGCATGTCTCTTCCACACTACAGTACAGTACAACCCCTGCACCATTTTTCTTTGTCTTCTTCCTTCTTCTCTGCTGCTACCTTCCTTTTTCATCTCAAAGAAAAAAAACACACACAGATACAGTAGATACATTGTGTTTGGATGTTTGACTGCATCTGCATTGATCTGCAACATGAATTTGCACGTACCGTACGCCAATGCAGCCGGTGCCTGGGACGGTGGTGCTCAAGATCGGCGCCGTCGGCCTCCACTGCGACGGCTGCATGAACCGCATCCGCACCAAGCTCTTCCACATCCAAGGTAAACAACCTCTCAATTACTTGTCCATGATTTCATTATTCAGTTTCAGCTAATTAAACTCCAGTGTGATCTCTGTGTGGTTTTGCAGGAGTGGAGCAGGTGGCCATGGAGATGGCCAAGAACCAGGTGACGGTGACCGGGACCATGGACATCAAGGCCCTGCCGGAGAAGCTCCGCAAGAAGCTGCGCCGCCCCGTCGACGTCGTGCCGCCGGGCAAGCAGAAGGACAAGGACGGCGGCAAGGACAAGGAGAAGCAGGACGGTGGCAAGGACGGCGGCGGCGGCGGCAAGGACGCGGCGGCGAAGGCGCTGACGGCGGAGAAGGAGGCGTGGAAGGCGGCGTTCTACGACCAGCAGGCGCTGCTCGCCACCGAGTTCATGCTCAGCGACGAGAACCCCAATGCCTGCTCCATCGCCTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA009300