BGIOSGA009308

From RiceWiki
Revision as of 03:29, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA009308| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA009308, complete gene.| tag = P0474F1...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA009308

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA009308, complete gene.

LocusTag

P0474F11.19-1

Ensembl Transcript ID

BGIOSGA009308-TA

Ensembl Protein ID

BGIOSGA009308-PA

Length

2408

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:37447632..37450039

Sequence Coding Region

37447632..37449392,37449512..37450039

Genome Context

<gbrowseImage1> name=IndicaChromosome02:37447632..37450039 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:37447632..37450039 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCCTCCAAGATTCAGATGCCAAGATTACCTCCTGCCGCTGCTGCTCGCCCTTTCGCCGGCCGCCGCCGCCGCCCGCGAGGTGGAGTACCACCATTGCCACTGCGACGGCGGCGGCGGCGGCGGCGGCGGCGGGGGGTTGTGGAGCATGGACAGCATCTTCAGGTGGCGGAAGGTGAGCGACCTGCTGATCGCGGCGGCCTACTTCTCCATCCCGCTGGAGATCCTCTACTTCGTCGCCGGGCTCCGGCATCTCCTCCCGTTCCGGTGGGTGCTCGTCCAGTTCGGCGCCTTCATCGTGCTGTGCGGCCTCACCCACCTCCTCACCGCCTTCACCTACGAGCCGCACCCGTTCATGGTGGTGCTCCTCCTCACCACGGCCAAGTTCTTGACGGCGCTCGTCTCCTTCCTCACCGCCATCACGCTGCTCACCCTCATTCCGCAGCTGCTCCGGGTCAAGGTGAGGGAGAGCTTGCTGTGGCTCAAGGCCAGGGAGCTCGACCGCGAGGTCGTCCTCATGAAGCGGCAGGAGGAGGCGAGCTGGCATGTCCGGATGCTCACCCACGAGATCCGCAAGTCGCTCGACCGCCACACCGTGCTCTACACCACCCTCATCGAGCTCTCCAGGCTGCTCGGCCTCACCAACTGCGCCGTCTGGATGCCCGCCGCCGGCGAGATGTGCTTGACGCACGAGCTCCGGCGAGACGGCGGCGGCGAGGATGGCGTCGTCGGCGTCGACGACGCGGACGTCGTCGAGGTGCGGGGGAGCGACGGCGTCAAGCTGCTCGGGCCGGACTCGGTGCTCGCCGCGGCGAGCGGCGGCAAGGAGGAGGGCACCGGCGCGGTGGCGGCGATCCGGATGCCGATGCTGAAGGTGTCCGACTTCAAGGGCGGCACGCCGGAGGTGATCCAGACGAGCTACGCCGTGCTGGTGCTGGTGCCCCCCGCCGGCAAGAGCTGGGGGCGGCACGAGATGGAGATCGTCGAGGTGGTCGCCGGCCAGGTCGCCGTCGCGCTGTCGCACGCGACGCTGCTGGAGGAGTCCCGGGCGATGCGGGACCGGCTGGCGGAGCAGAACCGCGAGCTGCTGCAGGCGCGGCGCGACGCGCTCATGGCGAACGAGGCGAGGCAGGCGTTCCAGGGCGTGATGAGCCAGGGGATGCGCCGCCCGATCCACTCCATCCTCGGCCTCGTGTCCATGGTGCAGGAGGAGGCCCTGGCGCCGGAGCAGAGGCTCGTCGTCGACACCATGGCGCGCACCGCCACCGTCGTCTCCACGCTCGTCAACGACGTCATGGAGATGTCGGCCGACAGCCGCGAGCGCTTCCCGCTCGAGACGCGGCCGTTCCACCTGCACGCCATGATCAGGGACGCCGCCTGCGTCGCCCGGTGCCTCTGCGACTTCAGGGGGTTCGGCTTCGCCGTGCACGTCGAGAACGCGCTGCCGGACCTCGTCGTCGGCGACGAGCGGAGGATTTTCCATGTCCTGCTCCACATGGTCGGCAACCTGATTGGCCGCACCGAGCCCGGGCATGTCACGCTCCGGGTGCGCGCCGCCGACGACGACGTGCTGGACGACAGGCTCGGCCAGAGGTGGGATCCATGGCGGCCGTCCTACTCCACTGGCTACTCCTCGGTGAAGTTTGTCATTGGTGTCAAGCGGCAGCAGAACGGCGATGCCGGCTCGCCGCTGTCGCGGAGGCCGAGTGGGAAGGGCATTGATCTCAGACTTAGCTTCAGCATGTGCAGAAAGCTTGTGCAGATGATGCAAGGGAACATCTGGGCGATTCTTAATCCCCAAGGGCTACCCGAGAGCATGACTCTGGTGCTCAGGTTTCAGCTGCAATCGCCACTGACATCATCAAGCCTTGGAGGATCATTCGAGCAGAAGCACTCGTCGCCGTCGTGCCAGATTGCAGGCCTGAAGGTTCTGCTTATCGACGACGATGACGACATCAACCTTGTGGTTGCTCGGAAGCTATTGGAGAAGCTCGGCTGCGTGGTCTCCTCGCCGCCTTCAGGATCAGGATTTCTCAGCTCTGTTGGCTCCTCAGCAGCAGCCTTCCAGCTTGTCATGGTGAACCTCGAAATGAAGAGAGTAAAAGCCCTTGATGTCGCGACGAGGATCAGCCAGTACAGGAGCGGCCGATGGCCAATCGTCATGGCCATGGCTTCCGACCAGAAGGCCTGGGAGAAGTGCGCTCAATCCGGGATCAATGGCATCCTCAAGAAGCCGGTGATTCTGCAGGAGTTGAAAGACGAGCTGGCGCGAATTCTTCAGAGCACATGA</cdnaseq>

Protein Sequence

<aaseq>MPPRFRCQDYLLPLLLALSPAAAAAREVEYHHCHCDGGGGGGGGGGLWSMDSIFRWRKVSDLLIAAAYFSIPLEILYFVAGLRHLLPFRWVLVQFGAFIVLCGLTHLLTAFTYEPHPFMVVLLLTTAKFLTALVSFLTAITLLTLIPQLLRVKVRESLLWLKARELDREVVLMKRQEEASWHVRMLTHEIRKSLDRHTVLYTTLIELSRLLGLTNCAVWMPAAGEMCLTHELRRDGGGEDGVVGVDDADVVEVRGSDGVKLLGPDSVLAAASGGKEEGTGAVAAIRMPMLKVSDFKGGTPEVIQTSYAVLVLVPPAGKSWGRHEMEIVEVVAGQVAVALSHATLLEESRAMRDRLAEQNRELLQARRDALMANEARQAFQGVMSQGMRRPIHSILGLVSMVQEEALAPEQRLVVDTMARTATVVSTLVNDVMEMSADSRERFPLETRPFHLHAMIRDAACVARCLCDFRGFGFAVHVENALPDLVVGDERRIFHVLLHMVGNLIGRTEPGHVTLRVRAADDDVLDDRLGQRWDPWRPSYSTGYSSVKFVIGVKRQQNGDAGSPLSRRPSGKGIDLRLSFSMCRKLVQMMQGNIWAILNPQGLPESMTLVLRFQLQSPLTSSSLGGSFEQKHSSPSCQIAGLKVLLIDDDDDINLVVARKLLEKLGCVVSSPPSGSGFLSSVGSSAAAFQLVMVNLEMKRVKALDVATRISQYRSGRWPIVMAMASDQKAWEKCAQSGINGILKKPVILQELKDELARILQST</aaseq>

Gene Sequence

<dnaseqindica>1..1761#1881..2408#ATGCCTCCAAGATTCAGATGCCAAGATTACCTCCTGCCGCTGCTGCTCGCCCTTTCGCCGGCCGCCGCCGCCGCCCGCGAGGTGGAGTACCACCATTGCCACTGCGACGGCGGCGGCGGCGGCGGCGGCGGCGGGGGGTTGTGGAGCATGGACAGCATCTTCAGGTGGCGGAAGGTGAGCGACCTGCTGATCGCGGCGGCCTACTTCTCCATCCCGCTGGAGATCCTCTACTTCGTCGCCGGGCTCCGGCATCTCCTCCCGTTCCGGTGGGTGCTCGTCCAGTTCGGCGCCTTCATCGTGCTGTGCGGCCTCACCCACCTCCTCACCGCCTTCACCTACGAGCCGCACCCGTTCATGGTGGTGCTCCTCCTCACCACGGCCAAGTTCTTGACGGCGCTCGTCTCCTTCCTCACCGCCATCACGCTGCTCACCCTCATTCCGCAGCTGCTCCGGGTCAAGGTGAGGGAGAGCTTGCTGTGGCTCAAGGCCAGGGAGCTCGACCGCGAGGTCGTCCTCATGAAGCGGCAGGAGGAGGCGAGCTGGCATGTCCGGATGCTCACCCACGAGATCCGCAAGTCGCTCGACCGCCACACCGTGCTCTACACCACCCTCATCGAGCTCTCCAGGCTGCTCGGCCTCACCAACTGCGCCGTCTGGATGCCCGCCGCCGGCGAGATGTGCTTGACGCACGAGCTCCGGCGAGACGGCGGCGGCGAGGATGGCGTCGTCGGCGTCGACGACGCGGACGTCGTCGAGGTGCGGGGGAGCGACGGCGTCAAGCTGCTCGGGCCGGACTCGGTGCTCGCCGCGGCGAGCGGCGGCAAGGAGGAGGGCACCGGCGCGGTGGCGGCGATCCGGATGCCGATGCTGAAGGTGTCCGACTTCAAGGGCGGCACGCCGGAGGTGATCCAGACGAGCTACGCCGTGCTGGTGCTGGTGCCCCCCGCCGGCAAGAGCTGGGGGCGGCACGAGATGGAGATCGTCGAGGTGGTCGCCGGCCAGGTCGCCGTCGCGCTGTCGCACGCGACGCTGCTGGAGGAGTCCCGGGCGATGCGGGACCGGCTGGCGGAGCAGAACCGCGAGCTGCTGCAGGCGCGGCGCGACGCGCTCATGGCGAACGAGGCGAGGCAGGCGTTCCAGGGCGTGATGAGCCAGGGGATGCGCCGCCCGATCCACTCCATCCTCGGCCTCGTGTCCATGGTGCAGGAGGAGGCCCTGGCGCCGGAGCAGAGGCTCGTCGTCGACACCATGGCGCGCACCGCCACCGTCGTCTCCACGCTCGTCAACGACGTCATGGAGATGTCGGCCGACAGCCGCGAGCGCTTCCCGCTCGAGACGCGGCCGTTCCACCTGCACGCCATGATCAGGGACGCCGCCTGCGTCGCCCGGTGCCTCTGCGACTTCAGGGGGTTCGGCTTCGCCGTGCACGTCGAGAACGCGCTGCCGGACCTCGTCGTCGGCGACGAGCGGAGGATTTTCCATGTCCTGCTCCACATGGTCGGCAACCTGATTGGCCGCACCGAGCCCGGGCATGTCACGCTCCGGGTGCGCGCCGCCGACGACGACGTGCTGGACGACAGGCTCGGCCAGAGGTGGGATCCATGGCGGCCGTCCTACTCCACTGGCTACTCCTCGGTGAAGTTTGTCATTGGTGTCAAGCGGCAGCAGAACGGCGATGCCGGCTCGCCGCTGTCGCGGAGGCCGAGTGGGAAGGGCATTGATCTCAGACTTAGCTTCAGCATGTGCAGAAAGCTTGTGCAGGTAGTGTTATTGCCTGGATCACTGCATTGCATCTGAATCATCTGAACATGAAATTAGCAGTCCAATCTCAAGAGAGCATATTACCACTGATGCTGATGTCTTGTTGATCCTACTGACAGATGATGCAAGGGAACATCTGGGCGATTCTTAATCCCCAAGGGCTACCCGAGAGCATGACTCTGGTGCTCAGGTTTCAGCTGCAATCGCCACTGACATCATCAAGCCTTGGAGGATCATTCGAGCAGAAGCACTCGTCGCCGTCGTGCCAGATTGCAGGCCTGAAGGTTCTGCTTATCGACGACGATGACGACATCAACCTTGTGGTTGCTCGGAAGCTATTGGAGAAGCTCGGCTGCGTGGTCTCCTCGCCGCCTTCAGGATCAGGATTTCTCAGCTCTGTTGGCTCCTCAGCAGCAGCCTTCCAGCTTGTCATGGTGAACCTCGAAATGAAGAGAGTAAAAGCCCTTGATGTCGCGACGAGGATCAGCCAGTACAGGAGCGGCCGATGGCCAATCGTCATGGCCATGGCTTCCGACCAGAAGGCCTGGGAGAAGTGCGCTCAATCCGGGATCAATGGCATCCTCAAGAAGCCGGTGATTCTGCAGGAGTTGAAAGACGAGCTGGCGCGAATTCTTCAGAGCACATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA009308