BGIOSGA009318

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Revision as of 03:30, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA009318| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA009318, complete gene.| tag = OsJ_089...")
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Gene Name

BGIOSGA009318

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA009318, complete gene.

LocusTag

OsJ_08928

Ensembl Transcript ID

BGIOSGA009318-TA

Ensembl Protein ID

BGIOSGA009318-PA

Length

4912

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:37530306..37535217

Sequence Coding Region

37530306..37530561,37531653..37531774,37531952..37532073,37532242..37532313,37532993..37533356
,37533775..37533915,37534213..37535217

Genome Context

<gbrowseImage1> name=IndicaChromosome02:37530306..37535217 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:37530306..37535217 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGAAGCTGCGGCAGGGGCAGGAGGAGCCATTGGAGGTAGTGGTCGCGAGGCGGCGGCGGAGGAGGAGGACGGCGGCGAGCAGTGGCTAGAGGAGGAGGCGGAGGCGGAGGCGGTGTACTGCGCCGTGGGGAAGGAGGCGGTGAAGGAATGGAAGGCGAACCTCATGTGGGTGCTCGCCGCCTTCCCCTGGAGGAGGAGGAGGAGCCGCATCGTCCTCATCCACGTCCACCGCCCGCCTTCCCGGGTCAATATGATGGGGGCATGGGTCCCAGTAAGTCAGCTTGCAGAGGAGGAGGTGAATGCATACAGGCAGCTGGAGGAGGAGAGGATCAGCAAAGTCTTAGATGATCTCTTGGACATTTGCAAAAGTCAAAAGGTCAATGCGAGCAAGATCATCTTCTCCTGCGACGACATCGCGAGAGGCCTCCTCCAGCTCGTCGATGATCATGGGATCACTGATCTTGTCATGGGAGCAGCATCTGACAAGGCCTATTCAAGGAAAATGCGGGCGCCGAGATCTAAGAAAGCTCGGAAGGTGCAACTGAAGGCGAGCCCCTCTTGCAAGATCTGGGAGGTGAACGAAGGACTCAATAGAACAGGATCATCGACAACTAGCACAAGTCCGAGGTCGAGCACTTCTGATTACTCGAGGTCGAGATCCTCGCCACGAGTGCACAGCCTAAGCAGCGAGCAATTCGGTATGCAGGATCCAGCCGAACCGACGACATCATCAGTTGATCAGACTCCTATCAGGGAGGACAATGCCATGGACCGTGGCACTGAGGGTTTTAATCATGAAGCAGTTGCTGTTGCTAGTTCATCAACAGTCCCAGTGTCTGAAAATGTAGAGGCTGTACAGAGATCAGCTGCTGCTGTTGTGCAGTCTCTGCAAGAAATTGAAGAGGACTCACCAACTCCTTCAGGGCATGGTTCGGAGGATGCTGGTGATGTGAGCGATGCGTACGACAAGTTCAAGGATGCTGTGATAGAAGCCGAGAACCTCAGGCATGAGGCATACGAGGAGACTCGCCGGCGTCAAAAGGTCGAGCGCGACCTCGCCGACGCGACAAGAATTGCGAACGAAGCGGAGAGCTCGCAGCAGAGGGAGGCGAGGCATCGGAAGGAGGTGGAGGAGAGGCTGGCGAGGGAGCGCGCGGCCATGGAGCAGGACAGGCGAGAGCTCGACGACATACTCGCGCAGACACGCGAGGTGGACGCCCGCGCCGCCGAGCTCGAGCTCCAGATCACGAGCTCCGAGCGGATGATGAGAGACCTCGAGGCCAAGCTGTCGGAATCGTACGACCTCCTCCACCAGCTCCGGCGAGAGCGCCGGCGCGACGATGTGCCGGCGGAAGCAATGGCGGGAAGCGAGGCTGGTGACCAGAGACTGACCTTCTTGCGGCTCGGCTTGCCGGAGCTGGAGGAGGCGACCAACCATTTCGACGAATCTGTCAGGATCGGAGGCGGCGACGGCAGCCGTGGCAGCGTGTACAGGGGCGACCTGCGCAGCATGGCGGTCGCCGTCAAGATGATCGGCCGTGACGTCGCCGTCGACGAGGTCGGTTTCTGCCGCGAGGTGGAAGCCGTCGGCAGGGCGAGGCACCCGAACCTCGTCACGCTCGTGGGCGCGTGCCCGGAGGCCCGCGCCGTGGTGCACGAGTTCGTGCCGGGCGGGAGCTTGGAGGACCGCCTCGCCGGCGCCGCGCCGGCGCTGCCGTGGCACGAGCTGTGCGGCGTCGCGCACCGGGCATGCTCCGCGCTGGCGTTCCTCCACTCGACGCAGCCACGGGCGACGGTGCACGGCGACGTCCGGCCGGCGAACATCCTCCTGGGCGAGGAGTGCTGCTCGAGCAAGCTTGCCGGCCTCGGCATGCGCAGGCTGGTGCGGAGCTCCGGCGGCGTGGCGCTGTCAAGGCCGGCGGTGGGCTACGTGGACCCGCGGCACCTGGCGACGGGGGAGATGACCCCGGAACGCGACGTGTACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTAACAATGTGGTGCTACAGTAAACATTTTATCATGATGGATTAA</cdnaseq>

Protein Sequence

<aaseq>MEAAAGAGGAIGGSGREAAAEEEDGGEQWLEEEAEAEAVYCAVGKEAVKEWKANLMWVLAAFPWRRRRSRIVLIHVHRPPSRVNMMGAWVPVSQLAEEEVNAYRQLEEERISKVLDDLLDICKSQKVNASKIIFSCDDIARGLLQLVDDHGITDLVMGAASDKAYSRKMRAPRSKKARKVQLKASPSCKIWEVNEGLNRTGSSTTSTSPRSSTSDYSRSRSSPRVHSLSSEQFGMQDPAEPTTSSVDQTPIREDNAMDRGTEGFNHEAVAVASSSTVPVSENVEAVQRSAAAVVQSLQEIEEDSPTPSGHGSEDAGDVSDAYDKFKDAVIEAENLRHEAYEETRRRQKVERDLADATRIANEAESSQQREARHRKEVEERLARERAAMEQDRRELDDILAQTREVDARAAELELQITSSERMMRDLEAKLSESYDLLHQLRRERRRDDVPAEAMAGSEAGDQRLTFLRLGLPELEEATNHFDESVRIGGGDGSRGSVYRGDLRSMAVAVKMIGRDVAVDEVGFCREVEAVGRARHPNLVTLVGACPEARAVVHEFVPGGSLEDRLAGAAPALPWHELCGVAHRACSALAFLHSTQPRATVHGDVRPANILLGEECCSSKLAGLGMRRLVRSSGGVALSRPAVGYVDPRHLATGEMTPERDVYXXXXXXXXXXXXXXXXXLTMWCYSKHFIMMD</aaseq>

Gene Sequence

<dnaseqindica>1..256#1348..1469#1647..1768#1937..2008#2688..3051#3470..3610#3908..4912#ATGGAAGCTGCGGCAGGGGCAGGAGGAGCCATTGGAGGTAGTGGTCGCGAGGCGGCGGCGGAGGAGGAGGACGGCGGCGAGCAGTGGCTAGAGGAGGAGGCGGAGGCGGAGGCGGTGTACTGCGCCGTGGGGAAGGAGGCGGTGAAGGAATGGAAGGCGAACCTCATGTGGGTGCTCGCCGCCTTCCCCTGGAGGAGGAGGAGGAGCCGCATCGTCCTCATCCACGTCCACCGCCCGCCTTCCCGGGTCAATATGAGTATGCTCCATCGCTAGCTATTTCATTCCAAATACTATTCCAGTTTATTTCCAATTAACTCCCGTTCTTCATTGCGTGCGTTCTTCTTGTTGCAGTTCGCTAATTCTTGCGGTCTTCTTGTTGTTTGCAGAGGTTTTGGTTGTTTATGCTTCTTATTGTTTTTTTTTCTGTTTAATTTTACGGGTTCTCAATTGCCCCCATGCATCTGTTCTTGCTTGTAATTAATCCGGTTCAGAAATGGCTTTTTTTTCTGTTTCTTGGCATTTGATTGCACTCCTTCGAAATGGCACCATTGCAATCTCAGTATTCCAACCATTGCAAACTTTTTATATATATAAAATTCATCTCCCGTTATCGGCAAATACCTGATCTTTTCAAATCCGCTCTTGCAAATAACAGAAAATAATTCAAACCACCTTCCCTAAATGCGACAAATCTAATTTTTCTAGAAAGATCATTCCATTTCTTTTTGGCAAATAACAACCCATTTCAAGCTAGCTGCTGTCTCCTCCATGGAAACTGGGGTTTTTTGATGCTGCGGCTGTTCTACGTGCACTGCTTACATTCCTTTTATTTTCCCATTTGAGGCCTCAATTTGTTTTCTGACTTGTCGTGGACGTGCATTATCAAGGAAAAAAAATGCGTAGAAATCAACATCTCGGACAACTTAAACTATTGCTCAGAATAATCTTATACAAATACATCTCTGCCAAGTGGAACAGTACTATAGTTTCTGCTAAGCATATCCGTCTTCAGCTAAAAGCATATTCACTGTTTGTATTTTCAGTCTAATTAAGAATTGCAATGCTAGCTCTGACCTTAATCAGGTTGTAAAACATTTCCCTTTTTATCTGGCTATTATTTTGATGAAATCAAAATGTTAGACTTGGCTACCAATATTTTCTTGTAAAATGACACCAGCTGGCTGTATATGTTCTCTTTGCTTTTCCCACCAAATCTGTCAACCTGAAAGTAGGTGCCTTTTGTTATGTTCCTACCTTTACAATACCTTTTACATTACACTTTTGTGTTCCAAAAAATGTTGGATCTTTTGTGACATTTTTTTTTGGGTACTACCTGTGGATTTGCAGTGGGGGCATGGGTCCCAGTAAGTCAGCTTGCAGAGGAGGAGGTGAATGCATACAGGCAGCTGGAGGAGGAGAGGATCAGCAAAGTCTTAGATGATCTCTTGGACATTTGCAAAAGTCAAAAGGTTGAAACCATGATAAAGAGTTCATTGTTTTACATTTGATCCATCTTGCTTGCTGTCAATATCAGATTGCTAGTCTCAACTCACCAGCAGCCTCTGGCTGTGTTCTTATTATGACAGTCTCCCTCTTCTCCATATGCAGCCTGGGTTGCTAACAAAGTTGCTGAAAAAAACTCGCAGGTCAATGCGAGCAAGATCATCTTCTCCTGCGACGACATCGCGAGAGGCCTCCTCCAGCTCGTCGATGATCATGGGATCACTGATCTTGTCATGGGAGCAGCATCTGACAAGGCCTATTCAAGGTATGGCTGTCTTGTTCTTGGAAATTAATACATACAAATCCAGCTCTCGCTGTCGCTGCTGTTGTTATCAATCGATCGGTCCAAGAACTGGCTGGTCCAGCTTGGTGCCAGTGGATTGCTGAATTCAAAGGCAAATGATCTGGAATTCTGGATGCAATGTGATGTTAGGAAAATGCGGGCGCCGAGATCTAAGAAAGCTCGGAAGGTGCAACTGAAGGCGAGCCCCTCTTGCAAGATCTGGTTTGTCTGCAAAGGAAACCTTATCTGCACTAGGTATGCATGCATGACTCAGAAAAGTCTTAATGCCAACGATGCAACTTGCAAAAGCCTTTGGTTTTTCTTCTCCCTGTCTTGCTCAAAATGGGACAGGTATTTGTAGATTTCTATGATAGCACTGATGACAAAGACTGAAGACTGAATTGAAGTAGCACACCGTTTAACTCGTGGTTATTCTTCTATCATTGTAAGGAACATGATAGAAACTTTTTTTTTCTCGAGATAAACATGATAGAAACTGTGGTTGCGTCGGCAACATTTCCCGACATAGTTGTCTGGGAATTTACCGTTCTTCTATGACCATTTTAGCTGTTCTCACATTAAGACAATGATCACAGACTGAATTAGGCCAGACATCCTGCTCAAAAAAGAATTAGGCAAGACAAAGAATAATCTGATATACTGATAATATGATAATGTTTATGACAAATGACTAACAAAATAACAAACCTTGAACAAAAATAGTACCTGTGGAAGCACTGAGATTGCCTGAACATCCTAGTTTGTGACATATTATTCTGAACTTTTGGCATTCTTCTATTAGCTTTCTAGCTGTTCTAACATAAGGATATTCTATTTTTCCTGGAAAAATATTATAAGATTTACATATTTCCTTTAATTCCATTTGTCTGATCCGTTATAGGGAGGTGAACGAAGGACTCAATAGAACAGGATCATCGACAACTAGCACAAGTCCGAGGTCGAGCACTTCTGATTACTCGAGGTCGAGATCCTCGCCACGAGTGCACAGCCTAAGCAGCGAGCAATTCGGTATGCAGGATCCAGCCGAACCGACGACATCATCAGTTGATCAGACTCCTATCAGGGAGGACAATGCCATGGACCGTGGCACTGAGGGTTTTAATCATGAAGCAGTTGCTGTTGCTAGTTCATCAACAGTCCCAGTGTCTGAAAATGTAGAGGCTGTACAGAGATCAGCTGCTGCTGTTGTGCAGTCTCTGCAAGAAATTGAAGAGGACTCACCAACTCCTTCAGGGCATGGTTCGGTATGTGCTATACGTTTCATAAATCATACAGTATAATACTAGTTTCAAGGGAAAAAAAGTTGAAAGAATTTTTAAAGAAAAAATGAACAAATCCCAACATGTAGAAAAAAACTATCTGAATTCCACATTACATGACATCTGTTTACTTGTTCAGTTACCACAAAAATATTTCGATTAGCGTTTATTTTCCTACTCCTAGATTGTTTGATCTTGGACTGCTGAAAATGGTACTAAAATTGTCGAAATGACTTGTTTTTGTCTCCACTACAGAAACATAATTTGAACAGCACATGTTTCATAAGTCGAAGATTTTGGCCAACTGATCTGCACCAGAATATACAGCATCAGTGTAATACACATTATATGTGGTTCAGATAGTAAACATTTAAACAATAAACGGTGCATTCCGTTTTGACAGGAGGATGCTGGTGATGTGAGCGATGCGTACGACAAGTTCAAGGATGCTGTGATAGAAGCCGAGAACCTCAGGCATGAGGCATACGAGGAGACTCGCCGGCGTCAAAAGGTCGAGCGCGACCTCGCCGACGCGACAAGAATTGTAAGTAGAGGAAATGAATCCAAGCTGCATTGCATCGTTGGTTCGATCCCATTGTTCATGTCGAATTCACCATGGATGCTTCCCGCTGATTGAAGTTGCGTTTACTCGTCGTAGTAGTCTCTTCCTTTTTCTTCTTTAGTTTTTCTTGTTTTGTCTTTTCTCTCTTCTCTTGGCATAAGCCGGTCTGGCGGATTACGTTGTATAAATAAACATTCTTTTCTTCTGATATATTGACGTGCAATCCTTTTACGTGTTCGCGAAAAAATTCACCATGGATGGATGATGTGATCGATGCAGGCGAACGAAGCGGAGAGCTCGCAGCAGAGGGAGGCGAGGCATCGGAAGGAGGTGGAGGAGAGGCTGGCGAGGGAGCGCGCGGCCATGGAGCAGGACAGGCGAGAGCTCGACGACATACTCGCGCAGACACGCGAGGTGGACGCCCGCGCCGCCGAGCTCGAGCTCCAGATCACGAGCTCCGAGCGGATGATGAGAGACCTCGAGGCCAAGCTGTCGGAATCGTACGACCTCCTCCACCAGCTCCGGCGAGAGCGCCGGCGCGACGATGTGCCGGCGGAAGCAATGGCGGGAAGCGAGGCTGGTGACCAGAGACTGACCTTCTTGCGGCTCGGCTTGCCGGAGCTGGAGGAGGCGACCAACCATTTCGACGAATCTGTCAGGATCGGAGGCGGCGACGGCAGCCGTGGCAGCGTGTACAGGGGCGACCTGCGCAGCATGGCGGTCGCCGTCAAGATGATCGGCCGTGACGTCGCCGTCGACGAGGTCGGTTTCTGCCGCGAGGTGGAAGCCGTCGGCAGGGCGAGGCACCCGAACCTCGTCACGCTCGTGGGCGCGTGCCCGGAGGCCCGCGCCGTGGTGCACGAGTTCGTGCCGGGCGGGAGCTTGGAGGACCGCCTCGCCGGCGCCGCGCCGGCGCTGCCGTGGCACGAGCTGTGCGGCGTCGCGCACCGGGCATGCTCCGCGCTGGCGTTCCTCCACTCGACGCAGCCACGGGCGACGGTGCACGGCGACGTCCGGCCGGCGAACATCCTCCTGGGCGAGGAGTGCTGCTCGAGCAAGCTTGCCGGCCTCGGCATGCGCAGGCTGGTGCGGAGCTCCGGCGGCGTGGCGCTGTCAAGGCCGGCGGTGGGCTACGTGGACCCGCGGCACCTGGCGACGGGGGAGATGACCCCGGAACGCGACGTGTACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTAACAATGTGGTGCTACAGTAAACATTTTATCATGATGGATTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA009318