BGIOSGA009323

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Revision as of 03:30, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA009323| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA009323, complete gene.| tag = OJ1136_...")
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Gene Name

BGIOSGA009323

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA009323, complete gene.

LocusTag

OJ1136_C04.8

Ensembl Transcript ID

BGIOSGA009323-TA

Ensembl Protein ID

BGIOSGA009323-PA

Length

5339

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:37569960..37575298

Sequence Coding Region

37569960..37570820,37570901..37571025,37573169..37573768,37573868..37574159,37574515..37574680
,37574979..37575081,37575181..37575298

Genome Context

<gbrowseImage1> name=IndicaChromosome02:37569960..37575298 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:37569960..37575298 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGACGAGTACCACCACCGCATGGGCGCCGCCGCCGATTTCCGCCGGGACCTCGAGGACCTCGTCTGCGACCACCTCGGGGGATGCTTCTCCCCGACGTCGTCCTCGTCGTCGTGCTCCGCGGCGGGGGGAGGGGTCGCCGCGGGGCACCAGCCCGACGAGGAGCCCGAGTCGTCGGCCGCGCGGAGGCGGAGGCGGGAGTCGCGCCTCCTCAGCCGGTGGGTCGCGCGCCAGGCCGAGGAGGTGCTCTCCTCCATGGAGCGCGAGGTCGAGCGACGCAACCGGGAGGCCGAGCTCCTCGCGCTCGCACGCCTCCACCCCGTCTCCACCCTCGACCCCTCCTCCTTCCTCCTCTCCTCGCCCACCGCGCCGCCGCCGCGCCCCCAGGCACCCTCCCCGACCGCGCCCCCTTCCCTCCTCCAGATGTGGCGCGAGCTCGAGCACCGCCGCTCCGACGCCGACCAGCCCTTCGACCGCGAGCCCTCCCCCGACACCGCCGACCGCGAGCGCGTGCGCCAGATCGCCCGCCGCCTCACCGCCAACACCGACGTCCCCACCGCCGCCGCCGCTGCCGCCACCACCGGGGAGTGGCTCGGCGAGACGGAGAGGCAGAGGGTCAGGCTCGTCAGGGAGTGGGTGCAGATGGCCAGCCAGCCTCGCGACTCCCGCGTCGCCTCGCGCAGGGACGACACAGCCGCTGGCGAGAGGGAGAGGCGAGGGGAGCCTCCTCGCCTCCGTGGCCGACAAGCGCGTCTCGATGTCATCACTCGGATGGCCCGAGAGCGCCAACGCGAGCTCCAGGGGATATCAGGGTATCACATTGTGTCCGAGTTCCCTCACCGCAGCCGCAACCGCATCCAGGGATTGCTTAGGGGGAGGTTCTTGAGGAACGTGGTTCTTCCAGTTGAGGAGGAGGAACGACCACCATCCGTGGCGGCGAGGGAGCTCGGGCAGTTGAGGCAGAGCCATCGTGTGTCCACTTTGAGATCAGAGAGTGCTGTAAGTAGTGAAGATGTTAGCCGGTTTGATTCTTCTGTGGCTGAAAGTGTTGGAGTACTAGGTAGTGACGAACCTCAACAAGGGGCTGAGGTCAGGGCCCTCACTGGTACTGAGAATACGACCCAAATTATGCTTGAGGATGTGGGTTTACAGGAGGCAGATGCAGAAAATGCTGCCATAGAGTCACCAAGTGTAGCTTTGGATAACATGGTTGAGATGCATGAAACTCAAGTTGACAATAGGCTGCAAGATGAGGCAGGACGGGATGCAAGATTTTGGCAGCCATCTCTGGACGACTCACTTGATAGGTGGCCCAATGAAACTGCAGAGGATGCTGAAAGAAATTGGGAAGATAATGCAGAGGAATTACACAGTGAAACTATGGAGGATGATGCCAGGGAGCATGATCATCTTCAAGATGAGCATGATGAATGGCATGATGACGAGTCTCATGGTACTGAGAACTGGCAAGATGATTTCCAAGATTCTCCACTTGACATGGGCCCCATTCCTAGAACTGAAAATAGATTCATCCCGCCAGATGATGACAATGTGTACAGCATGGAACTGAGAGAATTGCTTAGCAGGCGAAGTGTATCCAATCTTCTTAGTAATGGTTTTGGTGAAAGTTTGGAGCGATTAATAAGGTCATATGTTCAAAGACGTGGTCGTGGACCCCTCAATTGGAATCTCGATGCAGCTATTCCAGCTGTGAATTCACCAAACGAAAATCAGGAACAAGAGAGGAATGCTGAAACTCGGCAATTCCAAGCTCCTGTTAACAGACCTGCGCTTGTTATCCCTCCCCCACCTTTGCCACCCCGACAGCCACTATGGCACAGAGAATTGCGTCATAACAACTGGAGCACTAGACACAGGGAATGGGATGCTATTAATGATTTGAAAGCTGACATGGGTAGACTTCAACAAGGGATGAGCAGCATACAGAGGATGCTGGAGGCGTGCATGGACATGCAACTTGAACTCCAACGCTCAGTGAGACAAGAAGTGTCGGCGGCCTTGAATCGCTTTGCAGGACCTGAAGGGTATCCGACGGATCTATCTGACGATGGATCAAAATGGGATCAAGTGAGGAAGGGAACCTGCTGCGTATGCTGCGATGCGCAAATTGATTCTCTATTATACAGATGCGGGCACATGTGTACTTGCTCAAAATGTGCAAACGAGCTAATTCGCAGTGGTGGCAAATGCCCACTATGCCGAGCGCCGATCGCGGAGGTGGTTCGGGCATATTCAGTAATGTAA</cdnaseq>

Protein Sequence

<aaseq>MDEYHHRMGAAADFRRDLEDLVCDHLGGCFSPTSSSSSCSAAGGGVAAGHQPDEEPESSAARRRRRESRLLSRWVARQAEEVLSSMEREVERRNREAELLALARLHPVSTLDPSSFLLSSPTAPPPRPQAPSPTAPPSLLQMWRELEHRRSDADQPFDREPSPDTADRERVRQIARRLTANTDVPTAAAAAATTGEWLGETERQRVRLVREWVQMASQPRDSRVASRRDDTAAGERERRGEPPRLRGRQARLDVITRMARERQRELQGISGYHIVSEFPHRSRNRIQGLLRGRFLRNVVLPVEEEERPPSVAARELGQLRQSHRVSTLRSESAVSSEDVSRFDSSVAESVGVLGSDEPQQGAEVRALTGTENTTQIMLEDVGLQEADAENAAIESPSVALDNMVEMHETQVDNRLQDEAGRDARFWQPSLDDSLDRWPNETAEDAERNWEDNAEELHSETMEDDAREHDHLQDEHDEWHDDESHGTENWQDDFQDSPLDMGPIPRTENRFIPPDDDNVYSMELRELLSRRSVSNLLSNGFGESLERLIRSYVQRRGRGPLNWNLDAAIPAVNSPNENQEQERNAETRQFQAPVNRPALVIPPPPLPPRQPLWHRELRHNNWSTRHREWDAINDLKADMGRLQQGMSSIQRMLEACMDMQLELQRSVRQEVSAALNRFAGPEGYPTDLSDDGSKWDQVRKGTCCVCCDAQIDSLLYRCGHMCTCSKCANELIRSGGKCPLCRAPIAEVVRAYSVM</aaseq>

Gene Sequence

<dnaseqindica>1..861#942..1066#3210..3809#3909..4200#4556..4721#5020..5122#5222..5339#ATGGACGAGTACCACCACCGCATGGGCGCCGCCGCCGATTTCCGCCGGGACCTCGAGGACCTCGTCTGCGACCACCTCGGGGGATGCTTCTCCCCGACGTCGTCCTCGTCGTCGTGCTCCGCGGCGGGGGGAGGGGTCGCCGCGGGGCACCAGCCCGACGAGGAGCCCGAGTCGTCGGCCGCGCGGAGGCGGAGGCGGGAGTCGCGCCTCCTCAGCCGGTGGGTCGCGCGCCAGGCCGAGGAGGTGCTCTCCTCCATGGAGCGCGAGGTCGAGCGACGCAACCGGGAGGCCGAGCTCCTCGCGCTCGCACGCCTCCACCCCGTCTCCACCCTCGACCCCTCCTCCTTCCTCCTCTCCTCGCCCACCGCGCCGCCGCCGCGCCCCCAGGCACCCTCCCCGACCGCGCCCCCTTCCCTCCTCCAGATGTGGCGCGAGCTCGAGCACCGCCGCTCCGACGCCGACCAGCCCTTCGACCGCGAGCCCTCCCCCGACACCGCCGACCGCGAGCGCGTGCGCCAGATCGCCCGCCGCCTCACCGCCAACACCGACGTCCCCACCGCCGCCGCCGCTGCCGCCACCACCGGGGAGTGGCTCGGCGAGACGGAGAGGCAGAGGGTCAGGCTCGTCAGGGAGTGGGTGCAGATGGCCAGCCAGCCTCGCGACTCCCGCGTCGCCTCGCGCAGGGACGACACAGCCGCTGGCGAGAGGGAGAGGCGAGGGGAGCCTCCTCGCCTCCGTGGCCGACAAGCGCGTCTCGATGTCATCACTCGGATGGCCCGAGAGCGCCAACGCGAGCTCCAGGGGATATCAGGGTATCACATTGTGTCCGAGTTCCCTCACCGCAGCCGCAACCGCATCCAGGTTGGTCTTTGCATTGCATTGCAGGAATCGGTCATCTGTAATGCCGACGACGGTGCTCTGAGATATGTGTTGCTTTACAGGGATTGCTTAGGGGGAGGTTCTTGAGGAACGTGGTTCTTCCAGTTGAGGAGGAGGAACGACCACCATCCGTGGCGGCGAGGGAGCTCGGGCAGTTGAGGCAGAGCCATCGTGTGTCCACTTTGAGGTTAGCAGGCATTCCAGTTCCAACTTTCTCTTGTAATTGTAGCTATATATTGATTGGTATATCTCTTACATGAATGCGAGCATTTCCGGGATTTTCGTTGTATCCTTTCAGTGCAAATGGATTTTTCTGGTTGTATCTTTTCCACTAACATCTATCAAAGAATGTTGGCGTAGAAAGCGCTGCATTATTTATACTATTCTGACAAATCGTCTGGTTCTTGGATAATTGGTAGACTCGCTTGCTACTTGCTACTCTCTTATGTAGCTTACGACCCCACTTGCACAGCCTCATTTGTTTTTGTGGTCCCCTTAGTATTGTATGGTGTTTTTGTGTGGTACATTATGAGCCCACTGCCACATTACTCGTTTAATCCATTGCTCTTCCTTCTATTGAGCTGTGGTGATGTACAATTGTCTGTTTGGGGCATATGAGCATAAAATTCCACCTTCCACTTCCATTGTGATTAATAACATAATTGACCTAATTTGGGATTTTTTTTTCTAAATTTTAAAAAGGGAAACTTTCTGATATTATCTACATGTTGATCCCTAATTGTGTCAATTGTCAAGTAATTTCTATTGGTAATTACCTGTGAATGCCTAGAATATATAGGTTTCCTTTGTTGGAAGGATTATTATTTCAGAAGAAGCGTTAAGGTGATTGTGCATTCTTGGATTGAGGGCTTTAGAGTTGGGTGCATCTGTTGGTTCTTTTAGTTTCTACTGCCAATCCTGCCTGGCAGATGAGTATCAGTCACATATGTGACCGTTACGTTTAGTATGGAATGGGTGTCCAATGCTAGACAGTTAGAAGCAGGTACTTGTAAGTTGTAAACCATAGTTGTGGTAGAAGTTGTTTAGAAGGAAACTTCCATCTGAATTATGAATCCTGTTCAAGTAGATGATCAGACCATTTCAGTACATTGAGGAGAAGCTCTGTGCAAGATATGGTTTAGCAGGACATTGTTTTTTTTTATGATTTATGCAGGATTTTGTACTATCGTCAAGCTAAAACTTCTTTTATACTTAATTCCTACAGAAGCACTGTAATCTGAAGGACTGAAACTACTTTTAAAACTAGAGCATCAAATGAGTATTTTCATCACAGCAAGTATACAGGCAAGGTTTCAGGTTCCAGTTCTACTAATTATACTGGTCCCTACCTGAACTTGTCAGTCTTGCTCTACACGTTAGGGACTGTTCACCAACCAATTTGTCCTAAATGGTACTGTGAAATATATTGATGATGTTGACTAGTAGCACACTATGGAAGTTAGGGCCCCTGAATTGAATCCGGCCTCTCTATATCTTCTTCTAAGAGCCGTCCTAGTAGATGGTGGTACCATCTATTAGCTGGTACCCCAACTGCTTAGTAGGTTTCATCAGTGGTGCTGTTTTAGTGATCTCCTGTTGCTTAAGTGCTCCTTTTATTCATGTTACTGACAACATTTCAATATGATATAACCATTATCTTTAACGGTATACTAGCCATGGAATTTTTTACTACTGCATTGAATGATTACATCTTTTATGATTTAGAGTAGTTTGTAAAAGGAGCAACATCAGCACTTTCATTTGATGTGTATATTGTGGTGATTTTTAGAACTTCTCATGACCAGTAATTAGTATGGTCATACCATAGTAGATGGAACGAGAGTAAAATCTAAAGTTTCAAATGCCAAACTTCAAACTGTGTCATGCACTCATGGTGCATGTGGTACATAAGTTAAGCACAATGAAGGACACATTTATTCTTGGTTGCCATATCATGCAACTTTAATTCTTTCTACTAATACGTGAAGTGCAAGTCCACTCACTTTTTGAAATATTAGAACCAGAATTGCTTCTACTGAAGTATAGTTATGTATTATTTGGCTAACATAACACTGTCCATCAATGGTCAGAGTTGCACCTGATGCTGTGAAAAATTCACAATGCCATGCAACATGAAAACTGGGAAGTATGTTCTTGTGCACTGCCGGTTAGTCTTAATCCAGCATCAGATAAACTGATGACAGCAAACTGCCAAAGAATGCATGCCTCTTGCCATTGTCTTTTTTGAGTTCTTTGCACGTAAGGAATATCTATAGGGTTTATGATATTGCATCCAGCTAATGACAAATGGCTCAACATGCTTATTTCAGATCAGAGAGTGCTGTAAGTAGTGAAGATGTTAGCCGGTTTGATTCTTCTGTGGCTGAAAGTGTTGGAGTACTAGGTAGTGACGAACCTCAACAAGGGGCTGAGGTCAGGGCCCTCACTGGTACTGAGAATACGACCCAAATTATGCTTGAGGATGTGGGTTTACAGGAGGCAGATGCAGAAAATGCTGCCATAGAGTCACCAAGTGTAGCTTTGGATAACATGGTTGAGATGCATGAAACTCAAGTTGACAATAGGCTGCAAGATGAGGCAGGACGGGATGCAAGATTTTGGCAGCCATCTCTGGACGACTCACTTGATAGGTGGCCCAATGAAACTGCAGAGGATGCTGAAAGAAATTGGGAAGATAATGCAGAGGAATTACACAGTGAAACTATGGAGGATGATGCCAGGGAGCATGATCATCTTCAAGATGAGCATGATGAATGGCATGATGACGAGTCTCATGGTACTGAGAACTGGCAAGATGATTTCCAAGATTCTCCACTTGACATGGGCCCCATTCCTAGAACTGAAAATAGATTCATCCCGCCAGATGATGACAATGTGTACAGCATGGAACTGAGAGAATTGCTTAGCAGGTATATTGACCTTCAGTACTAGAATTTCTTCCAAACATATTCTTTTATTGATATTAAATCTGTTCTTATTCTGAGCAATGACCACGTTTGTACTTTCAGGCGAAGTGTATCCAATCTTCTTAGTAATGGTTTTGGTGAAAGTTTGGAGCGATTAATAAGGTCATATGTTCAAAGACGTGGTCGTGGACCCCTCAATTGGAATCTCGATGCAGCTATTCCAGCTGTGAATTCACCAAACGAAAATCAGGAACAAGAGAGGAATGCTGAAACTCGGCAATTCCAAGCTCCTGTTAACAGACCTGCGCTTGTTATCCCTCCCCCACCTTTGCCACCCCGACAGCCACTATGGCACAGAGAATTGCGTCATAACAACTGGAGCACTAGACACAGGGTACATCACAGAGACCCCGTGTGTTATCTCTTCATTAAATTTTTGGAGCTATTGCATAATAGTTGTTTCTTTATCTGTGCTATTTCAATACCATGCTTTGCAAATCTGTTCTGTACACACATTGTTAATATCATGCAATGATTCATGACCTGTAGCGTCTTTAGAATTTGTTTTTCCTTCATACTCCTTTTTCCTAAATGTGCCAGCTGCCATGGGTCCATGACCCATGAGATGTCAGAACCGTGAAATTTATAAGTGACTTTTAATTAGTTCCTTTTGCTTGAATTAAGTTGTGCCCTGTATGCTCATTTAGAGTTTCATCTTGGAGGATTTATTCAGCTTTGCATCCTTGCAGGAATGGGATGCTATTAATGATTTGAAAGCTGACATGGGTAGACTTCAACAAGGGATGAGCAGCATACAGAGGATGCTGGAGGCGTGCATGGACATGCAACTTGAACTCCAACGCTCAGTGAGACAAGAAGTGTCGGCGGCCTTGAATCGCTTTGCAGGACCTGAAGGTTGTACTCCATTGCTCCTTGTTGCATACTGAGATATCCGTGCATCATATACTGTCTTTGCTAACACAGAGGACATGGCACACCTAACTACAGCTGATAGGGACAATACCTGAATTTCCTTATTATGTTGTTATGCACTTTACGTAGTTTAAGTTTTATTTCCGGTAATTATGCTATTAATAGACATTGTGCATGTTGTCAGTTTGTTGCGTGTTTCTTATTTTTGTCATACAGTAATTTCGCTGAAACTCTGTATGTACAGAAATCACTGAAACAACCTGTCCCTTTTATTTTTCAGGGTATCCGACGGATCTATCTGACGATGGATCAAAATGGGATCAAGTGAGGAAGGGAACCTGCTGCGTATGCTGCGATGCGCAAATTGATTCTCTATTATACAGGTCAGCTTCACAGCTAAACATGTCTGATACTTTGATGTTACTAATCTCTAACCTTTTTTGTCTGATGTACTTGTAAAACCCATTTGGTGATGGTGGCAGATGCGGGCACATGTGTACTTGCTCAAAATGTGCAAACGAGCTAATTCGCAGTGGTGGCAAATGCCCACTATGCCGAGCGCCGATCGCGGAGGTGGTTCGGGCATATTCAGTAATGTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA009323