BGIOSGA009325

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Revision as of 03:30, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA009325| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA009325, complete gene.| tag = OsI_095...")
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Gene Name

BGIOSGA009325

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA009325, complete gene.

LocusTag

OsI_09509

Ensembl Transcript ID

BGIOSGA009325-TA

Ensembl Protein ID

BGIOSGA009325-PA

Length

5421

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:37585456..37590876

Sequence Coding Region

37585456..37585465,37585838..37585869,37586447..37589251,37589339..37589392,37589598..37589819
,37590128..37590194,37590299..37590329,37590660..37590876

Genome Context

<gbrowseImage1> name=IndicaChromosome02:37585456..37590876 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:37585456..37590876 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGGTGCAGATCATGAGATGGTGATTCTAGCTGTGAAGGAGGTTTGCCATGTAATAATATTTCTCCAAGAAGGCTTCCGGTTCGACACACAGATTTTGAAGAAATTCCGTCTGTTGCAATCCTCAAAGCATGCTATTGCACCGTTTGTGAAGTCACTAGTAGCTCCTGCAGTGCCATCAAAAGTTGCTCGCTCTAATACTCCAACAAAGCCTACTCACAGGGCCTCATCCATCTCTCCTCCTGCACGCCGTGGAGGTCGTCATCCCTCAGCAATCTCGTTGATGTCAGGAACTGGCTCACATCCTTGTATGCTGCCAGGGCTATGCATCCCTGTTGTTCTGTTTGTCTTTGAGGATGATATCACTGATGCTCCAGGTGCTCCGACAAGTCCGGATGATACGAACGACACATCTTCATCAAATCAAGCTTCTAACACTGATGGCTTGCCAAAACCTAACATGACTTCAAAAGGTTCTAGTTCAGTGGTTATGCTTGCTAGGCCAGCAATCAGATCTGATGGTACTTTCAGCAAGAAGCTGCATTCCTCTGTAGAAGGTCAGATACGTTTCTTGCTAAAGAAGTGTCGGACACTTGTGGGTCTAGAGCCAGGGCATATTGTTTCGAGGGGTGTCAGTAATGTGAGCCACCTACCTCTGTTCTCACTTGATACATCAAGGGTCGTTGCACTGTTGGACCGGTCAATTAGTAAGAAACGTGAGCCATTGGATATCATTGCAGGACTGTTTGAAGACTCTTTGACATCCAAATCATCATTGGATGTTTCTTCGCTGGAGAACAATTGCCATCCAGCAACCCATGAAGATGTTCAGTTCATCAAGGATTTTATATTTCGACAATCAGATGGGCTGAGAGGAAGAGGGGGACACTCAAGCAATACAACTGCTGGTCCTGTTTCTGGTGTCGGAATGGTGGCAGCAGCAGCAGCTGCTGCTGCAGCATCAGCAGCATCCGGGAAGCAAATGAGTGCTCCTGATCTCCCTACTTTCGATACATGGTTGTCTATAAGTTCATCTATTTTGTCTGCACTGTTTAGTGGGGAAGATGGGTTAAGTAGTTCCCAAAACATGAAGGCATCACCTACTCATACAAGTTCATTTCCAAAGAACGATCAACTTCCTTCAGCAGGATCCAACGCAATTCAAACTGCTTTATCTTGCTTGGAAGGCAATAAGGGGCTTAATGTGAAATTTTCTTCATCATGGTGCCAAAGGATACTTCCAGCTGCTAAGGAGGTGTATTTGAAAGATTTGCCTGCCTTTTACCCAACCAGCATGCATGAAGTACAGCTACAGAAAGCTTTACGATCCTTCCACTCAATGGTTAAAGGACCGGCTGTCCAAGTATTCTCCAAGAAGCTAAAAGATGAATGCCAAGCAATATGGGAATCTGGAAGGCAGCAATGCGATGCTGTCAGTCTTACTGGCAGACCATGTAAGCACCAGAGACACGGTAAATCCTCTCCATCAGATGCAGCGTTACAGCATTCTAGTGGATATGTTTTCCTCCATGCATGTGCCTGTGGCCGGTCACGCCGTCTTAGGGATGACCCTTTTGATTTTGAGGCAGCGAACGTGACCTTTAACTGCTTCTCTAATTGTGAAGATCTGTTACCTACTCTTGTGCTTCCAAGAGAGACCAATGCTGGTGCATTTCCAGTATCCTCTTGGCGTTTGGTGCGGCTTGGAGGAGCAAGATATTACAAACCAACAAAAGGATTGCTCCAAGCAGGTTTTTGCTCCAAGGAAAAATATCTTTTAAGGTGGACGATTTCTCTTGGGAAAGGACAAGGGAAACATGGCACTCATGCTACCAATAAACCTTTCTCCACGGCATCTAATGCAGATCCTCAGGCTCCCCCTATTGTTGCTGGAGAAGTAAAATCGGCCGTGACCCAAGTCACAGCAGAAATTAAATCTATGAAACTTGAAAATTCTAGAAAACAACCTGAAGTCGAGTCAATGAACAATTCAAGTATTAATTTTGGTAAAGGTCTTCCAAACTTTACTATGAAGAAGCCTTTTGCTGAAGTTGTTGCTGGCCACACAGCAAGGGATTCTGAGTTTCCTGCTCTCCAACAGAAGAGGCCATTAAAACCTGGCAACTGGAAAGATGAGCGGCAAGTGAGTGGAGCAGACCAAACTAATGGCCGTGGTCATCCAGCTCTTAGTCAAGGACCTATAGCTGACAATGAATCTGAGAAAGTGAGCAGAGATAAGAGTAATGGAAGTGCTGGCGGAAAGCCATTTCTACAGATAGGGAGCAATATAGTGCCAATGGTTGTCGGAAAAGAGACTAAAGAAGTTAATCAATCTATACAGCAGTTCATGGTATATGTCGGATTTGAGCACGAGTGTTCCTATGGTCATCGTTTCTTACTGTCAGAGAAACATCTCAAGGAGATTGATTCGTCTTATTTGCAGTTTGAAAGATCTAATCTAAATAATGAAGCAGAAAGCAAACATGGTTCACAAAAGTTGCCCCAAAATGCATCTAGATTAGCAGCAACAATGGATGTGACCAGCGGAGGGAAGCTCAATAGGCCAATGGATTCATCAGGGAGAAACAGCCAGCAGCAATTGCTTAAGCCCAGGGTTGACGCTGAGACCTTGCAGCCTTCTCACTGGCTTTCAGATCCACAGAATGAAAGAAAGGGAGAGCTTTCTCTTCAGTATGTTACACTTGATGATGGTGGAGAAGCATTTTCACTTCTAAACAGAAATCTGCCCATATATATGCACTGCCCACATTGCAAGAGCTCAGATAGGAAGGGAAATCAAGATGCAAAGGTTGCTGCTGCTGTGTCACAACTTCAACGGATTTTTATTGTCACACCTGATTTCCCTGTTCTGCTGGCAAGCTGCCCAGTTGTACAGTTTGAGGCCTCATGTTTGCCTTCAAATGCTTCTGACCATGATCAACAAGGATCGTTCAGTCTTGGTTGTCGAGTTGTCCTTCCACCTGAGAGCTTTCTTACCATGAGACTTCCATTTGTCTATGGTGTTGAGACAAGAGATGGAAATACAGCTCCCCTGAAATACCTTGAGGAACAACCAGAACTCACAGCTTGGCTTGTTGGAGGCACAGCTTTGCAGATTGTATCACTTCCTTTTGCATTGAGAAACAGGAGCTCTCTTGACAAGATGAATGATGCACAATGGATGCATTGGAGGAACTGGACATGTACATTAATAGGTGTCAGCCTTTATTGGAGAGATGAACGCTCCAGGTTGGCATGGCAGCAGCCCCTTCTTGTAGCCTGGAGGTTGGAGAATGTTGAAACTGGAAGGAAACGCATGAACCAGTCCTGTTTGACAAGTGTAAAGGCACAGAAAGAAAGTGACGAGATCACAGTTGAGCCAAGCCTGTGCGACGATGCCTGCTTTTTCTTCACCTGCAAAACAACCGTTTCCACGTGA</cdnaseq>

Protein Sequence

<aaseq>MGADHEMVILAVKEVCHVIIFLQEGFRFDTQILKKFRLLQSSKHAIAPFVKSLVAPAVPSKVARSNTPTKPTHRASSISPPARRGGRHPSAISLMSGTGSHPCMLPGLCIPVVLFVFEDDITDAPGAPTSPDDTNDTSSSNQASNTDGLPKPNMTSKGSSSVVMLARPAIRSDGTFSKKLHSSVEGQIRFLLKKCRTLVGLEPGHIVSRGVSNVSHLPLFSLDTSRVVALLDRSISKKREPLDIIAGLFEDSLTSKSSLDVSSLENNCHPATHEDVQFIKDFIFRQSDGLRGRGGHSSNTTAGPVSGVGMVAAAAAAAAASAASGKQMSAPDLPTFDTWLSISSSILSALFSGEDGLSSSQNMKASPTHTSSFPKNDQLPSAGSNAIQTALSCLEGNKGLNVKFSSSWCQRILPAAKEVYLKDLPAFYPTSMHEVQLQKALRSFHSMVKGPAVQVFSKKLKDECQAIWESGRQQCDAVSLTGRPCKHQRHGKSSPSDAALQHSSGYVFLHACACGRSRRLRDDPFDFEAANVTFNCFSNCEDLLPTLVLPRETNAGAFPVSSWRLVRLGGARYYKPTKGLLQAGFCSKEKYLLRWTISLGKGQGKHGTHATNKPFSTASNADPQAPPIVAGEVKSAVTQVTAEIKSMKLENSRKQPEVESMNNSSINFGKGLPNFTMKKPFAEVVAGHTARDSEFPALQQKRPLKPGNWKDERQVSGADQTNGRGHPALSQGPIADNESEKVSRDKSNGSAGGKPFLQIGSNIVPMVVGKETKEVNQSIQQFMVYVGFEHECSYGHRFLLSEKHLKEIDSSYLQFERSNLNNEAESKHGSQKLPQNASRLAATMDVTSGGKLNRPMDSSGRNSQQQLLKPRVDAETLQPSHWLSDPQNERKGELSLQYVTLDDGGEAFSLLNRNLPIYMHCPHCKSSDRKGNQDAKVAAAVSQLQRIFIVTPDFPVLLASCPVVQFEASCLPSNASDHDQQGSFSLGCRVVLPPESFLTMRLPFVYGVETRDGNTAPLKYLEEQPELTAWLVGGTALQIVSLPFALRNRSSLDKMNDAQWMHWRNWTCTLIGVSLYWRDERSRLAWQQPLLVAWRLENVETGRKRMNQSCLTSVKAQKESDEITVEPSLCDDACFFFTCKTTVST</aaseq>

Gene Sequence

<dnaseqindica>1..10#383..414#992..3796#3884..3937#4143..4364#4673..4739#4844..4874#5205..5421#ATGGGTGCAGGTGGGTGCGGCATTCCGGGGTGAGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTTCCCCGCCGCCCCCCGCCGCCACCCCGCCCTCCCACGACGGCGTCGTCGCCGTCGGCTTCGTCGGCGGCGGGGGCACTGCCCGCCTCGCCGACCGGATCCTGGACGCCCATGTGTTCTCCCCTGGTGGCTCCGCCAGGACCCTCGCGGGCGGAGTCAGGTACCACCGCGACGGGGAGAAGAGGGTGGTGTTCCTGCACCTCGCTCCGTCGCCGCCGACACCTCTTGAGGGGGCGGGCGATCTACGGGAGCTGCTCTTCATGTTCTCCGTGAGTGTTTATAATCGTTTCGATGTAGATCATGAGATGGTGATTCTAGCTGTGAAGGAGGTCTCAGCTTTTGTTTTGCCCTGATATGATATGAAGCTATCATAGCGCGGTCTCTACATTTGTATTAGGTCATCTACCTCTAAATTGTCACGCTGTGTAGCAGCCAATGCAAACTACAGAACTTGGTACAGTAATTTAGTGGCTGGGTTCAATCTTTCTCATGCCTAACTGGATAACTTTGACAACTACGATCGGTTAGTTTTGAAGTGGCGATGTTGTGGGAGATAGGGGCATCATTTATCCAGCTGTTACCTGGACCGTGGGAATGCAAAATAAACTAAAAAAAAATCTGTGGTTAGCTGATAAATGCACTTGTTTCCTAACTTGATTTGCCAGGGAGAAAAATTTAAGATGACACTTTTAAGTTTGTTTATCCAGTTGTAGCAATTAAATTAACCTATTTGTTGTGGTTTTCTTACCTTGCTTGCAAATCCTCGTGCGATTCAAATTTGTCAGTAACATTTGATTGGTGCTCTGATCCTAGAAGTTACCGTCAAACTTTAGCTAATGGAAATTTAGGATTCAGTTGTTTGGTAATGTTGATTTTGATTTGCTTTTATTTTCTATACGTTGCCAGGTTTGCCATGTAATAATATTTCTCCAAGAAGGCTTCCGGTTCGACACACAGATTTTGAAGAAATTCCGTCTGTTGCAATCCTCAAAGCATGCTATTGCACCGTTTGTGAAGTCACTAGTAGCTCCTGCAGTGCCATCAAAAGTTGCTCGCTCTAATACTCCAACAAAGCCTACTCACAGGGCCTCATCCATCTCTCCTCCTGCACGCCGTGGAGGTCGTCATCCCTCAGCAATCTCGTTGATGTCAGGAACTGGCTCACATCCTTGTATGCTGCCAGGGCTATGCATCCCTGTTGTTCTGTTTGTCTTTGAGGATGATATCACTGATGCTCCAGGTGCTCCGACAAGTCCGGATGATACGAACGACACATCTTCATCAAATCAAGCTTCTAACACTGATGGCTTGCCAAAACCTAACATGACTTCAAAAGGTTCTAGTTCAGTGGTTATGCTTGCTAGGCCAGCAATCAGATCTGATGGTACTTTCAGCAAGAAGCTGCATTCCTCTGTAGAAGGTCAGATACGTTTCTTGCTAAAGAAGTGTCGGACACTTGTGGGTCTAGAGCCAGGGCATATTGTTTCGAGGGGTGTCAGTAATGTGAGCCACCTACCTCTGTTCTCACTTGATACATCAAGGGTCGTTGCACTGTTGGACCGGTCAATTAGTAAGAAACGTGAGCCATTGGATATCATTGCAGGACTGTTTGAAGACTCTTTGACATCCAAATCATCATTGGATGTTTCTTCGCTGGAGAACAATTGCCATCCAGCAACCCATGAAGATGTTCAGTTCATCAAGGATTTTATATTTCGACAATCAGATGGGCTGAGAGGAAGAGGGGGACACTCAAGCAATACAACTGCTGGTCCTGTTTCTGGTGTCGGAATGGTGGCAGCAGCAGCAGCTGCTGCTGCAGCATCAGCAGCATCCGGGAAGCAAATGAGTGCTCCTGATCTCCCTACTTTCGATACATGGTTGTCTATAAGTTCATCTATTTTGTCTGCACTGTTTAGTGGGGAAGATGGGTTAAGTAGTTCCCAAAACATGAAGGCATCACCTACTCATACAAGTTCATTTCCAAAGAACGATCAACTTCCTTCAGCAGGATCCAACGCAATTCAAACTGCTTTATCTTGCTTGGAAGGCAATAAGGGGCTTAATGTGAAATTTTCTTCATCATGGTGCCAAAGGATACTTCCAGCTGCTAAGGAGGTGTATTTGAAAGATTTGCCTGCCTTTTACCCAACCAGCATGCATGAAGTACAGCTACAGAAAGCTTTACGATCCTTCCACTCAATGGTTAAAGGACCGGCTGTCCAAGTATTCTCCAAGAAGCTAAAAGATGAATGCCAAGCAATATGGGAATCTGGAAGGCAGCAATGCGATGCTGTCAGTCTTACTGGCAGACCATGTAAGCACCAGAGACACGGTAAATCCTCTCCATCAGATGCAGCGTTACAGCATTCTAGTGGATATGTTTTCCTCCATGCATGTGCCTGTGGCCGGTCACGCCGTCTTAGGGATGACCCTTTTGATTTTGAGGCAGCGAACGTGACCTTTAACTGCTTCTCTAATTGTGAAGATCTGTTACCTACTCTTGTGCTTCCAAGAGAGACCAATGCTGGTGCATTTCCAGTATCCTCTTGGCGTTTGGTGCGGCTTGGAGGAGCAAGATATTACAAACCAACAAAAGGATTGCTCCAAGCAGGTTTTTGCTCCAAGGAAAAATATCTTTTAAGGTGGACGATTTCTCTTGGGAAAGGACAAGGGAAACATGGCACTCATGCTACCAATAAACCTTTCTCCACGGCATCTAATGCAGATCCTCAGGCTCCCCCTATTGTTGCTGGAGAAGTAAAATCGGCCGTGACCCAAGTCACAGCAGAAATTAAATCTATGAAACTTGAAAATTCTAGAAAACAACCTGAAGTCGAGTCAATGAACAATTCAAGTATTAATTTTGGTAAAGGTCTTCCAAACTTTACTATGAAGAAGCCTTTTGCTGAAGTTGTTGCTGGCCACACAGCAAGGGATTCTGAGTTTCCTGCTCTCCAACAGAAGAGGCCATTAAAACCTGGCAACTGGAAAGATGAGCGGCAAGTGAGTGGAGCAGACCAAACTAATGGCCGTGGTCATCCAGCTCTTAGTCAAGGACCTATAGCTGACAATGAATCTGAGAAAGTGAGCAGAGATAAGAGTAATGGAAGTGCTGGCGGAAAGCCATTTCTACAGATAGGGAGCAATATAGTGCCAATGGTTGTCGGAAAAGAGACTAAAGAAGTTAATCAATCTATACAGCAGTTCATGGTATATGTCGGATTTGAGCACGAGTGTTCCTATGGTCATCGTTTCTTACTGTCAGAGAAACATCTCAAGGAGATTGATTCGTCTTATTTGCAGTTTGAAAGATCTAATCTAAATAATGAAGCAGAAAGCAAACATGGTTCACAAAAGTTGCCCCAAAATGCATCTAGATTAGCAGCAACAATGGATGTGACCAGCGGAGGGAAGCTCAATAGGCCAATGGATTCATCAGGGAGAAACAGCCAGCAGCAATTGCTTAAGCCCAGGGTTGACGCTGAGACCTTGCAGCCTTCTCACTGGCTTTCAGATCCACAGAATGAAAGAAAGGGAGAGCTTTCTCTTCAGTATGTTACACTTGATGATGGTGGAGAAGCATTTTCACTTCTAAACAGAAATCTGCCCATATATATGCACTGCCCACATTGCAAGAGCTCAGATAGGAAGGGAAATCAAGATGCAAAGGTTGCTGCTGCTGTGTCACAACTTCAACGGATTTTTATTGTAAGCTGCTCTCCTTTTGAACCTTGTAGTATTTATCTGTTCTTTAATATTGTCTTTTCACTGATACGGCTACTCTTTTTGGTGAAGGTCACACCTGATTTCCCTGTTCTGCTGGCAAGCTGCCCAGTTGTACAGTTTGAGGCAAGTACAATCATCCCTACTCATGTAGTCGTTTTATCTTCTCAATGTTCTAGTATCAAGCAAATGAATCTCTTCTTGATATTTTAGTATCGAACAAATGAAATTCTCACTTGTAAACTGGGATCATGGGATGCAATTTTTTTTTACGACATGCATTTCTTAAATATTATGCGAGTTAAGTTTCGTTTTATCTCACTGGCATCAGGCCTCATGTTTGCCTTCAAATGCTTCTGACCATGATCAACAAGGATCGTTCAGTCTTGGTTGTCGAGTTGTCCTTCCACCTGAGAGCTTTCTTACCATGAGACTTCCATTTGTCTATGGTGTTGAGACAAGAGATGGAAATACAGCTCCCCTGAAATACCTTGAGGAACAACCAGAACTCACAGCTTGGCTTGTTGGAGGCACAGCTTTGCAGATTGTATCAGTAGGGCATACTAATGAGAAAGAAGCACCACTGTGAAGTGCGAAACGTGGGCTCTTAAGATTTATTCGTTTTGGTGTATCCTATTTTTGCATTCAGTGATGGGCAATTGGTAAGATGATGCACTGATATTGTACTTTGGTCATTACCCATCTTTAGTCAACTTATATGGATATTATCTACTTCATTCATTTTTCAGGTTCCAGCATTGAATTTCAGGATTCCGGCAAGTGTAATGGCTCATGATGTTTACATGGAGGTCTCGCCTCTCCTGCTGGATTTACGATGCTATGCTATTGATACAACTCTAGCTTCCTTTTGCATTGAGAAACAGGAGCTCTCTTGACAAGATGAATGATGCACAATGGATGCATTGGAGTGAGCTGGTGATGCAGGTACGCAATGTCAGTTCTAAACTTTCACTGTAGTACACGAGATGGGATTGGTATATCCAGTGAACCTGATGTTTGTTATTGATGCAGGGAACTGGACATGTACATTAATAGGTGTCAGGTAAAATTTCACTGTTGTACATTAATAGATGTTCCACGACAATTCGCCTTTGTCTCAGAATTTTAGTCCCATGAGTTAGTCCGTTTTAGCATGTAATGGTTTAGGCTTTTAGTCAGTCTAAATGCTGCTGTACTGTTGGGCATAATAATAAATTTTACACTGTCTTTGTAAAGCAAGAAATGATCACTGAATGACATGCTGTAGAAAATTCTTGTTTAAAGTTTTCTTGACTAGTCATATGTCCTACAGAATTTCTTGCTGAGGAATTCAGGGGATCAACTTCAAGAAGCGAAAACTAAAACCCGGAAACTCAACTTGGTCATTTTGCAGCCTTTATTGGAGAGATGAACGCTCCAGGTTGGCATGGCAGCAGCCCCTTCTTGTAGCCTGGAGGTTGGAGAATGTTGAAACTGGAAGGAAACGCATGAACCAGTCCTGTTTGACAAGTGTAAAGGCACAGAAAGAAAGTGACGAGATCACAGTTGAGCCAAGCCTGTGCGACGATGCCTGCTTTTTCTTCACCTGCAAAACAACCGTTTCCACGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA009325