BGIOSGA009330

From RiceWiki
Revision as of 03:30, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA009330| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA009330, complete gene.| tag = OJ1063_...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA009330

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA009330, complete gene.

LocusTag

OJ1063_D06.21

Ensembl Transcript ID

BGIOSGA009330-TA

Ensembl Protein ID

BGIOSGA009330-PA

Length

1718

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:37644917..37646634

Sequence Coding Region

37644917..37644952,37645105..37645998,37646098..37646634

Genome Context

<gbrowseImage1> name=IndicaChromosome02:37644917..37646634 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:37644917..37646634 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGAAGAACAAGAAGGGTAGTCGCCGCAACCGCAACAAATCAGCTCCCGTAATGGTGGTGGATAGGTTCACCACGCTACCTGATGGCATCCTGCTCAACATCCTGGACCGCCTCAACACGCCCGACGCCGTCAGAACCTGCCTCCTCTCTAAGAGGACGCTCCACCTCCCACGCATGCTTTCGCACTTTCGAATTGCCCTACTTTCATTCGCGCCAGATCCTGATTATATCACTTTTAAGGACACTATTGTGATGAACGCCGCCGTGGCCGATGCAACGGACAATGTTCTCAATTTCAGAGCCAAAGACATCCCTCTTCGCCAACTCAGCATATGTTTCTACTTGAAATACTACGATTGTCTCACCATCGGTAAAGCTGTTGCCCGAGCCATGGCAACCCACAAGCTTGACAGCGCTGAGTTCAGAATTCTGACAGATTATAAGCTACATTATTACACTTTTGATGGTCTCCACAACAATGGGAAACGGCTCATGACCTTTTTTGGTGCTTGTACTGATGCATTTGCTGGGCTTACAAGACTCTACCTACAGAACTTGAGGCTTGCTGAAACTGACATTCCCAATATCATTGCCACATGCAAACGGTTAGAGTCTCTACGCATGTTCATGTGTCAAACAGAGGGTACTGTGTTGCAGCTGCAGGTGGAACACCAGCGGCTTGTTGAGCTTGATATCTGCCACGGATGTTTAAAACTAGTCAAGCTCAATTCTCTACCGAAACTCGAACGACTGGTCTTTTATAGTTGGAGACATCCCCAAGAACCCTTGTATTTTGGCAATGTTCCGCAGCTGTCAAGCCTAAGCCTCACTAATGTAGGTCTGAGATGGCACAACCTTATCAGATTAAGTCAGTTTCTTTCTAATGTAACCTCCATAAGAGACCTGCATCTCAACTTCGAAAGCGAAAGGATTTGGGTTCAGCCAGAGTGCCCGAAACTGCTGGCGCCTGTTCTCAAGAATCTGCAAGTTTTGACTCTGGATGATCTCCCTGAAGGATGTGATATCGCTTGGACACGCTTCTTTCTTGAAGCTGCACCCTTCCTGAAGGAGCTATGCATCACAGTTTGGGACCATTGGTGTAATATTGTGACGGACAAGGTGGAACGGGAAGAAGAGGGTTACTGTGACAAAACAAACGTGCAGTGGGAGTCATCTTCACCTGATGGTTTCAGGCATTGCAATCTGGTTAAGCTCACCATCTACGGTTTCCAACCTGATGACAACTTTTTGGGATACATCAGGCACATCATGGAAACCGCGGTTAACATAGAGGAGATATCCCTGTACGACCGGAAGGTGGAAGATTGCTGTGAAGAGTTGGATCCCAAAATCAAGGTTGCTCCGTCAAAGTATCCGCAGACCGTCGAGGAGCAGGAGTTGCTGAGGAAGCAAATTACAGAGGGATTGGTGATGGCATCGCCTCATGTAATTAACTTCCGGTCTTAA</cdnaseq>

Protein Sequence

<aaseq>MKNKKGSRRNRNKSAPVMVVDRFTTLPDGILLNILDRLNTPDAVRTCLLSKRTLHLPRMLSHFRIALLSFAPDPDYITFKDTIVMNAAVADATDNVLNFRAKDIPLRQLSICFYLKYYDCLTIGKAVARAMATHKLDSAEFRILTDYKLHYYTFDGLHNNGKRLMTFFGACTDAFAGLTRLYLQNLRLAETDIPNIIATCKRLESLRMFMCQTEGTVLQLQVEHQRLVELDICHGCLKLVKLNSLPKLERLVFYSWRHPQEPLYFGNVPQLSSLSLTNVGLRWHNLIRLSQFLSNVTSIRDLHLNFESERIWVQPECPKLLAPVLKNLQVLTLDDLPEGCDIAWTRFFLEAAPFLKELCITVWDHWCNIVTDKVEREEEGYCDKTNVQWESSSPDGFRHCNLVKLTIYGFQPDDNFLGYIRHIMETAVNIEEISLYDRKVEDCCEELDPKIKVAPSKYPQTVEEQELLRKQITEGLVMASPHVINFRS</aaseq>

Gene Sequence

<dnaseqindica>1..36#189..1082#1182..1718#ATGAAGAACAAGAAGGGTAGTCGCCGCAACCGCAACGTAAGCCGTCTATTCCCTTCCTCAGTTAATTACTTACTAGTAATTTGCATTGCATCTGTCATGTCAGTTTTATCTTTCCCTGTCGATCCATGACTACTGTTGCACTAATTAATTTATTATTAGTTTCACAAATGAACACTATATCGATGCAGAAATCAGCTCCCGTAATGGTGGTGGATAGGTTCACCACGCTACCTGATGGCATCCTGCTCAACATCCTGGACCGCCTCAACACGCCCGACGCCGTCAGAACCTGCCTCCTCTCTAAGAGGACGCTCCACCTCCCACGCATGCTTTCGCACTTTCGAATTGCCCTACTTTCATTCGCGCCAGATCCTGATTATATCACTTTTAAGGACACTATTGTGATGAACGCCGCCGTGGCCGATGCAACGGACAATGTTCTCAATTTCAGAGCCAAAGACATCCCTCTTCGCCAACTCAGCATATGTTTCTACTTGAAATACTACGATTGTCTCACCATCGGTAAAGCTGTTGCCCGAGCCATGGCAACCCACAAGCTTGACAGCGCTGAGTTCAGAATTCTGACAGATTATAAGCTACATTATTACACTTTTGATGGTCTCCACAACAATGGGAAACGGCTCATGACCTTTTTTGGTGCTTGTACTGATGCATTTGCTGGGCTTACAAGACTCTACCTACAGAACTTGAGGCTTGCTGAAACTGACATTCCCAATATCATTGCCACATGCAAACGGTTAGAGTCTCTACGCATGTTCATGTGTCAAACAGAGGGTACTGTGTTGCAGCTGCAGGTGGAACACCAGCGGCTTGTTGAGCTTGATATCTGCCACGGATGTTTAAAACTAGTCAAGCTCAATTCTCTACCGAAACTCGAACGACTGGTCTTTTATAGTTGGAGACATCCCCAAGAACCCTTGTATTTTGGCAATGTTCCGCAGCTGTCAAGCCTAAGCCTCACTAATGTAGGTCTGAGATGGCACAACCTTATCAGATTAAGTCAGTTTCTTTCTAATGTAACCTCCATAAGAGACCTGCATCTCAACTTCGAAAGCGAAAGGGTAATTAATTTAAGCAAGCCTCTCTCTCTCTCATGTTATGAACATCTCATTCTCAACTTAACCCCTCCATCCTTCCTTTATGACTTGTTTGTATTACAGATTTGGGTTCAGCCAGAGTGCCCGAAACTGCTGGCGCCTGTTCTCAAGAATCTGCAAGTTTTGACTCTGGATGATCTCCCTGAAGGATGTGATATCGCTTGGACACGCTTCTTTCTTGAAGCTGCACCCTTCCTGAAGGAGCTATGCATCACAGTTTGGGACCATTGGTGTAATATTGTGACGGACAAGGTGGAACGGGAAGAAGAGGGTTACTGTGACAAAACAAACGTGCAGTGGGAGTCATCTTCACCTGATGGTTTCAGGCATTGCAATCTGGTTAAGCTCACCATCTACGGTTTCCAACCTGATGACAACTTTTTGGGATACATCAGGCACATCATGGAAACCGCGGTTAACATAGAGGAGATATCCCTGTACGACCGGAAGGTGGAAGATTGCTGTGAAGAGTTGGATCCCAAAATCAAGGTTGCTCCGTCAAAGTATCCGCAGACCGTCGAGGAGCAGGAGTTGCTGAGGAAGCAAATTACAGAGGGATTGGTGATGGCATCGCCTCATGTAATTAACTTCCGGTCTTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA009330