BGIOSGA009338

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Revision as of 03:30, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA009338| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA009338, complete gene.| tag = P0452F0...")
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Gene Name

BGIOSGA009338

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA009338, complete gene.

LocusTag

P0452F04.29

Ensembl Transcript ID

BGIOSGA009338-TA

Ensembl Protein ID

BGIOSGA009338-PA

Length

4716

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:37718925..37723640

Sequence Coding Region

37718925..37719098,37720259..37720503,37720905..37721586,37721665..37722019,37722315..37722406
,37722646..37722840,37722924..37723640

Genome Context

<gbrowseImage1> name=IndicaChromosome02:37718925..37723640 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:37718925..37723640 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCCCTCGCCTTCCTGCTGGGATTCCTCCTCGGCCTCCTGGCTCTGGCGGCGCTCGAGGCCGCCGCGCTCCTCTGGCTCGTCCGCCGCCTCCGCCGCCGGGACTCTGCCCCGCAGCCCGCGCCGGACGCCGACGAGCTCCCCGGCGAACGCCCCTTCCCGTACGAGAAGCAGGGCTTTCTGTGGATACTAGAGCCAGAAAAGACACCTAAAGCTAGTAATGAACGCTCATCGATTGGAGGCCCTAAAGAAACAAAGGAAAAAAAGAATATTGTGGAGGTTTTTCCTGCAAAGAGGTCGGCTAAAATCAAGGGGCGTTCACTTATTTTGTCTGGTCCTGATGGCTTCCACACAACCATTAAGCTTCTGAATTGCACAGTATTTGCTGTTTCAGCATCAAGTATGCCCTCTCGCAAATGGGCTAAAAGGTATCCTATTAAACTGGAAAGCAAGGAATATCAAATTTATAATGGAAGCAAGGCATGCTATCTTTATGCTGAAACTTCCTGGGAGAAGGAATCATGGTGTAAAGCACTTCGTCTTGCAGCTACTGCTGACAAGGAGAAAAAGAATTGGCATGCCAAGCTGAGCGAGGAGTTCAATAATTACATATCATCATTAAATTCTGAATACCCAGGTTTCCTAAAGCCTACAGTATTTTCTAGTGAGGACCATGAGGTTATGGACAGGGCAATAAAGACTGATGGGTCTTCCAAGGTCCGTCTCTTTCTCAAAAAGCTGGCAAAGAAGGCATCTACAAAGGTTCCGTTAGAGGGTAAGACAAGTTCCGGATCATCTACACAAGGAGAAAGAAAGATATTGGATAAATTACGCAGCTATCAGGGCACACCGTTTATTGAAGGATTAATGGGTTCACAAGATGACAAGTCCAATAGCAGTTCATCACAAGATACAGTGAAACCCAGTCCAACGTCTCCTGCTCTGGGTCAAATTGGACAACCTTCAGCTTTCCCTGATGTAAATGCCGATGATAGAATAGCAGATGAAGGTACACTTTGTTGGAACCTTTTATCTTCACGGTTGTTTTTTGATGCTAAAATGAGCGATGAGATACACAAGGCCATCAAAGCACGCATTCAGCGAACGTTATCAAGCATGAGGACCCCACCTTACGTTGGTGACATCACACTTGCTGACTTCAGCCTTGGAAAGCTTCCACCTTATGTACACGCGATGAGAGTCCTTCCACTGGATTTGAATGAGTTATGGGCTTTTGAAGTTGATTTTGAATATTCTAGTGGAATACTACTGCACATTGAAACAAGACTCGAGGTTCAAGAACCAGAGTTACAGAAGGACATAATGAAAAGTAACTTTGGTACAGACTCAAATGGAGAGGTTGAATCAGATCTTCTTGAGAGTATTGAACAATACGGTAACCAATTTCGAGATTCCCAAAATTCAGTTTCCTCAGTTGAAGAAAAAGGTGAACCAGATGGTAGTCAGCCCAAGAGCACTGGATGGACATCGGCCTATATATCAGGGTGGAAAAATATCATGCATTCCATAGCAGATCATGTCTCACAGGTGCCGCTCTCTCTGGCGATAAAAATTTCATCTGTTCGAGGTGTCCTGCGTGTGCATGTGAAACCTCCTCCTTCTGATCAACTCTGGTACGGATTTACATCAATGCCTGATTTAGAGTGGGACATCGAATCTTCTATTGGTGATAGGAAAATTACCAACAGTCACATTGGCTCGCTTATCGGTAACAGATTCAAGGCTTCACTCCGTGACAGTTTGGTGCTCCCAAACTGTGAAAGTATTTCCATACCATTTATGTTGGCAGAAAAGGATGACTGGGTACCTCTCAAGGATGCACCTTTTATTTGGCTCAATCGTGAGCCCACTGAGACCAGAAGCCACGCTGCAGCCGTTACGCCAACCCGGCCTGACGAAGTTATTCTGAAGGATGATGCTAGTAACAAAACTGTGGCGCCAAGTTTGCCCAATTCGTCAGCAAGAAGTGAGGAAACACTTAAAACAGCAGCATCCATTGATGAGCCAACCCAAGTGCCTGTGGCGGCAGCGGATGCATCGCATGAGCCGAGGAAGTCTCCCTTGGCTCCAGCTGGTGAAGCATCGTCTCCTTCCAGTCCTGACACAATCGACGAGCTGAGGAAGCCATTGCTGATCACAGAAAAGATTCAGGAAGAGGATTCTGAAAGCAAAGTGGAGTCTCCCTCGCCCCTGTACACATCTCTGAGGGGGATAGTGCCTGCAGGGGAGCAATCTGGAGACGAGTCGAAGCGAAAAGGCGGCAGGCGAGCTCGGATGATGGACTTCGGGAAGAAGATGGGAGACAAGCTGGAGGAGAAGAGGCGGCACATCGAAGAGAAGGGGCGGAATATCGTAGAGAAGATGCGCGAGAATGCCAGGACCAACAGCTTCGATAGGTCAATGACTAGCAGCAGCCATAGCAATAGCCAAAGCCAATAG</cdnaseq>

Protein Sequence

<aaseq>MALAFLLGFLLGLLALAALEAAALLWLVRRLRRRDSAPQPAPDADELPGERPFPYEKQGFLWILEPEKTPKASNERSSIGGPKETKEKKNIVEVFPAKRSAKIKGRSLILSGPDGFHTTIKLLNCTVFAVSASSMPSRKWAKRYPIKLESKEYQIYNGSKACYLYAETSWEKESWCKALRLAATADKEKKNWHAKLSEEFNNYISSLNSEYPGFLKPTVFSSEDHEVMDRAIKTDGSSKVRLFLKKLAKKASTKVPLEGKTSSGSSTQGERKILDKLRSYQGTPFIEGLMGSQDDKSNSSSSQDTVKPSPTSPALGQIGQPSAFPDVNADDRIADEGTLCWNLLSSRLFFDAKMSDEIHKAIKARIQRTLSSMRTPPYVGDITLADFSLGKLPPYVHAMRVLPLDLNELWAFEVDFEYSSGILLHIETRLEVQEPELQKDIMKSNFGTDSNGEVESDLLESIEQYGNQFRDSQNSVSSVEEKGEPDGSQPKSTGWTSAYISGWKNIMHSIADHVSQVPLSLAIKISSVRGVLRVHVKPPPSDQLWYGFTSMPDLEWDIESSIGDRKITNSHIGSLIGNRFKASLRDSLVLPNCESISIPFMLAEKDDWVPLKDAPFIWLNREPTETRSHAAAVTPTRPDEVILKDDASNKTVAPSLPNSSARSEETLKTAASIDEPTQVPVAAADASHEPRKSPLAPAGEASSPSSPDTIDELRKPLLITEKIQEEDSESKVESPSPLYTSLRGIVPAGEQSGDESKRKGGRRARMMDFGKKMGDKLEEKRRHIEEKGRNIVEKMRENARTNSFDRSMTSSSHSNSQSQ</aaseq>

Gene Sequence

<dnaseqindica>1..174#1335..1579#1981..2662#2741..3095#3391..3482#3722..3916#4000..4716#ATGGCCCTCGCCTTCCTGCTGGGATTCCTCCTCGGCCTCCTGGCTCTGGCGGCGCTCGAGGCCGCCGCGCTCCTCTGGCTCGTCCGCCGCCTCCGCCGCCGGGACTCTGCCCCGCAGCCCGCGCCGGACGCCGACGAGCTCCCCGGCGAACGCCCCTTCCCGTACGAGAAGCAGGTCAGGCTGCTTCCACTCACGTATCTCTCGCTTCGATTACCCTACTCGGGGATAGGGGATAGGGGATAGGGCGAATGCGGCGCGCTGGAATACTAGTAACAGTAACTGCTTCTGCAGCTTTGGAGCTAGGGATCACCTCTCGATTCGATCTCCTGTTTTTTTTTTTATCTTACTATGAAATAGTTGCAGCTTGCTTCCACTGCTAATTACTTACTTGGGAGGAGCAAAATGCTACTACTGTGCATTCATATGCTAACAAGGTTTCTTTTTCCCCAATTGCTGCACTTCAACTAGAGAATCGACATGCCTTTGTGTTCAGACCGCAATTTTTGTACATCCTGGATCGTTCAGTTGTTCCAAATACTAATATCAGTGATTGGGTTCTGTTATTCTGGTTATTCATCGCAAAATTTTATGTTCCCCTTTTGTTATCCAAGCAAATTGCTCCTAGGGTTCATGCATGCCATATATGTTTACTTCTTAAGTTCCTGGCCTTTTTTTTATTTCAAATTCTAATTTGCTCCTGGCATTGACCTCTACTTAGTTTTTGGCCCATGATTCTATCCATTGGCATGCCCAGCTCATACACCTGCTCATCTCAGTGTATATTGTTCTCCTGTGCGGAAACACCTACATGTTCTCATCTTCATCACAAGTGTTGTACTTGTACATGTAGTAGACTCCACCACTAAGCTTAATGAATTCTCTATGGATGAACTAGTAGGTTACATGCTGAAGAGACCTAAACATAATCGTTTCCTTTTGGTTCCAATTATCACAGCTGATACATGTTCACCACTGACCAATATACATACGACCTGGTTATATTTTCATGAATGCAACGTTTTTTTTCCTGTAACTTCCTTTCACCATGATGTTCCTTGTTTTTACATATTTTTGCACTGCATCTTTATGCTAGTTCTGTTTTACATCATGGGTACTCAACATTGAGCTTATAAAGGTTGAACAATATGGTTCAAGGAAAATATACTTGCATTTTGGATAAAATGGCTTAAATACCATTGCAATCCAGAGTTCATCCAAATTGCTTTGGCATACTATATTTGCAATAACATTTCATTTAGATTCCTCTTTAGAGCCTCCATGTTTTTTAGTTACTAAGGATGATCCTGCTTAAAATAGATGCTGTATGTTTACAGGGCTTTCTGTGGATACTAGAGCCAGAAAAGACACCTAAAGCTAGTAATGAACGCTCATCGATTGGAGGCCCTAAAGAAACAAAGGAAAAAAAGAATATTGTGGAGGTTTTTCCTGCAAAGAGGTCGGCTAAAATCAAGGGGCGTTCACTTATTTTGTCTGGTCCTGATGGCTTCCACACAACCATTAAGCTTCTGAATTGCACAGTATTTGCTGTTTCAGCATCAAGTATGCCCTCTCGCAAATGGTCAGTATTTGGTGCAGGAGAAAATGATACTTTTCATCATGAGCTCATCTTTTTTTTACCCCTATCCAGTTTCCAGTTGTACACATTGTGAATTTACAGTCAAGTTTAACCTTGTGTCGCGATTTGCCAAATAAAATTTCAGAGGCATGTAGAAATGCTTTTGTTTGAAGGTAAATCATGTATTTGTACATGTTGGAGCCAGCTTATATGGATTTTATTTCTTGAAGGAACTCCTATAGAGACGGAATGTACTTCTTTAGAAGACAGTTAGAAGTACTTGCCAAGCAGCTTTCTGTTCTGCTCCTTTCATTCAGCTGTTTTACTTCTGCTACTAGGGTTTTTTTTTTTTGCTCGTATACTTCACTCTATGTGTAACTTTAGTACCTTTGCTTAACTTTCAGGGCTAAAAGGTATCCTATTAAACTGGAAAGCAAGGAATATCAAATTTATAATGGAAGCAAGGCATGCTATCTTTATGCTGAAACTTCCTGGGAGAAGGAATCATGGTGTAAAGCACTTCGTCTTGCAGCTACTGCTGACAAGGAGAAAAAGAATTGGCATGCCAAGCTGAGCGAGGAGTTCAATAATTACATATCATCATTAAATTCTGAATACCCAGGTTTCCTAAAGCCTACAGTATTTTCTAGTGAGGACCATGAGGTTATGGACAGGGCAATAAAGACTGATGGGTCTTCCAAGGTCCGTCTCTTTCTCAAAAAGCTGGCAAAGAAGGCATCTACAAAGGTTCCGTTAGAGGGTAAGACAAGTTCCGGATCATCTACACAAGGAGAAAGAAAGATATTGGATAAATTACGCAGCTATCAGGGCACACCGTTTATTGAAGGATTAATGGGTTCACAAGATGACAAGTCCAATAGCAGTTCATCACAAGATACAGTGAAACCCAGTCCAACGTCTCCTGCTCTGGGTCAAATTGGACAACCTTCAGCTTTCCCTGATGTAAATGCCGATGATAGAATAGCAGATGAAGGTACACTTTGTTGGAACCTTTTATCTTCACGGTTGTTTTTTGATGCTAAAATGAGCGATGAGATACACAAGGCCATCAAAGCACGCATTCAGGTTAGATATACTGCTTATGTTTACAAAGTAACCTGCTCTTGTCTGTACTTGTTAATTAGTTGAATTTTATTTTGTTAGCGAACGTTATCAAGCATGAGGACCCCACCTTACGTTGGTGACATCACACTTGCTGACTTCAGCCTTGGAAAGCTTCCACCTTATGTACACGCGATGAGAGTCCTTCCACTGGATTTGAATGAGTTATGGGCTTTTGAAGTTGATTTTGAATATTCTAGTGGAATACTACTGCACATTGAAACAAGACTCGAGGTTCAAGAACCAGAGTTACAGAAGGACATAATGAAAAGTAACTTTGGTACAGACTCAAATGGAGAGGTTGAATCAGATCTTCTTGAGAGTATTGAACAATACGGTAACCAATTTCGAGATTCCCAAAATTCAGTTTCCTCAGTTGAAGAAAAAGGTGAACCAGGTATGCTTCAATTTCATATATGTGTTTTCTTGTTTATTTCATTTGTTTCTTTGAGTAACTGTTTATGATTGTCCTACCAATGACTGCATTACAATTAAGAGTAAAAAGAATCCAATTAGTTATGATCTACCGCTGGCATGATCAGCTTGTTGTTTTCCTGTTTTGCTTATGTATGCTTGTACTGACTTGATGTAAGCTTTATTACAATTATGGTTAGAAGGTTGCCCAGTCCTCTGATGCATCAAGAATCAAGATATGTTTAGTGATCCAGACCTTGTGTGATCTTTTGTATCAGATGGTAGTCAGCCCAAGAGCACTGGATGGACATCGGCCTATATATCAGGGTGGAAAAATATCATGCATTCCATAGCAGATCATGTCTCACAGGTTTACACCTCTCCTTTTGGCCTTCATGCATCTCTTTCCTACGTGTTACATGTTTCTGAGCACATCTCAGGTCATCTCTGTATTTGATAAGTTGCTCTTAAAAACTGTAACATTAGCCTTGGTACATCTCTGCCAGTGAAATCGTACATCAAACTTATTTTAGAAGCTTAAAGTTATGGAGATTTCTCTTTAAAACAATATGAATATTTCACCAGTGATCTTAAGATCTTCTTGCACAGGTGCCGCTCTCTCTGGCGATAAAAATTTCATCTGTTCGAGGTGTCCTGCGTGTGCATGTGAAACCTCCTCCTTCTGATCAACTCTGGTACGGATTTACATCAATGCCTGATTTAGAGTGGGACATCGAATCTTCTATTGGTGATAGGAAAATTACCAACAGTCACATTGGCTCGCTTATCGGTAACAGATTCAAGGTAGTGAACACATCCCATCCTCTTCTGAGCTTGTTACTTCTCTTCCAACCTACATGTTTTAATCACACCTTTCTGCTGCTCAGGCTTCACTCCGTGACAGTTTGGTGCTCCCAAACTGTGAAAGTATTTCCATACCATTTATGTTGGCAGAAAAGGATGACTGGGTACCTCTCAAGGATGCACCTTTTATTTGGCTCAATCGTGAGCCCACTGAGACCAGAAGCCACGCTGCAGCCGTTACGCCAACCCGGCCTGACGAAGTTATTCTGAAGGATGATGCTAGTAACAAAACTGTGGCGCCAAGTTTGCCCAATTCGTCAGCAAGAAGTGAGGAAACACTTAAAACAGCAGCATCCATTGATGAGCCAACCCAAGTGCCTGTGGCGGCAGCGGATGCATCGCATGAGCCGAGGAAGTCTCCCTTGGCTCCAGCTGGTGAAGCATCGTCTCCTTCCAGTCCTGACACAATCGACGAGCTGAGGAAGCCATTGCTGATCACAGAAAAGATTCAGGAAGAGGATTCTGAAAGCAAAGTGGAGTCTCCCTCGCCCCTGTACACATCTCTGAGGGGGATAGTGCCTGCAGGGGAGCAATCTGGAGACGAGTCGAAGCGAAAAGGCGGCAGGCGAGCTCGGATGATGGACTTCGGGAAGAAGATGGGAGACAAGCTGGAGGAGAAGAGGCGGCACATCGAAGAGAAGGGGCGGAATATCGTAGAGAAGATGCGCGAGAATGCCAGGACCAACAGCTTCGATAGGTCAATGACTAGCAGCAGCCATAGCAATAGCCAAAGCCAATAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA009338