BGIOSGA009339

From RiceWiki
Revision as of 03:30, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA009339| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA009339, complete gene.| tag = P0452F0...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA009339

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA009339, complete gene.

LocusTag

P0452F04.36

Ensembl Transcript ID

BGIOSGA009339-TA

Ensembl Protein ID

BGIOSGA009339-PA

Length

4082

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:37741908..37745989

Sequence Coding Region

37741908..37742452,37745275..37745989

Genome Context

<gbrowseImage1> name=IndicaChromosome02:37741908..37745989 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:37741908..37745989 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCCTTCGCCGCCGCACCTCGCCGGCGCGCTGGACGCGGCGCGCCCCTTCCTGCGCGGCGAGGAGGAGCAGGTGGACCCGGCGCTCCCCAAGCTGGCCGCCGTGCTGCGCGCCGCCGGCGCCGGCGAGTGCTGGCACAAGCACGGCACCTTCCTCGCCCACCTCCTCGACGTCCACCGCATCCTCCGCCTCTGGGGCGCCCCCGACGCCGTCGCGCGCTGCGGCCTCTACCACTCCGCCTACTCCAACTCCTACGTCAACCTCGCCATCTTCGAACCCGACGTCGGCCGCGACCACGTGCGCCCCATCGTCGGCGCCGCCGCCGAGCGCCTCGTCCACCTCTTCTGCGTCGTCCCGCGCCACCAGCTCATCCACGACGACCTGCTCTTCCACTACGCCGACCAGGACCTCGTCGCCGACCTCGCCGCCTCCGAGGCGTCACTGCAGGACGCGCGGCGCGGGCTGTTCCACCACGACGGCGAGGCCTGGCGGCTCAAGATCCAGCGCCTCCTCCCGCCCCACGGAATCACTGTCAAACACATCAGGACTGGCGAGGATGTGGCACTGTCGAGGCGCATCGCGGCAACCTTCCTTCTCATGACAATGGCGGACTTCAGCGACCAGCTCTTCGACTGGCAGGATCGCCTCTTCGACAACACCAATGGCCGCCTCGAGTTCAGTGGCAACACCTGGACTTCGCTCTGGCCAGGCACCGGCAAGCCCGGCCTCTGGACTGCCTCCATATCCCGCATGGGCGCGCTCTACAGCCTCATCGTTCGCGAGGAAGAGATACACATAGCTCAACGAAAGCATAGCAACAATGGCCAAGAAGACGATCGTGACGAGGACATTGAGCTGGTGATCCCACCGGTGTTCAATGGCTGCACCCAGGTGCTCACCGCCGACGACCAGAAGGCGGCACGGGACCTCTACTGGGATGCAGTTTGCAGCGGCGGCGAGGACGAGACGGATTGGCGCAAGGTGGAGGAGATCCTGCGACGGTGCATTGGCAGGAACCCGTTTGTAGGAGAGCCTCACCTGGTTCTTGCTCAGGTGCTTCTGAACATGGAGATGTATGAGGAGGCAGAGGAGCAGATAGAGGCAGGGGTGAAGCTGTTGCTGGAGTGGGGGAGCAGCTGGGACAAGAGGATGCCATGGGAGGCTTGGGTGTCATGGGGCAGGGCGATGCTGATCAAGGCCAAGGACAAGGATTGGCCGCACACCTCCTTCGGCATCCTCAGCATAGGGCTTGTCAAGTGA</cdnaseq>

Protein Sequence

<aaseq>MPSPPHLAGALDAARPFLRGEEEQVDPALPKLAAVLRAAGAGECWHKHGTFLAHLLDVHRILRLWGAPDAVARCGLYHSAYSNSYVNLAIFEPDVGRDHVRPIVGAAAERLVHLFCVVPRHQLIHDDLLFHYADQDLVADLAASEASLQDARRGLFHHDGEAWRLKIQRLLPPHGITVKHIRTGEDVALSRRIAATFLLMTMADFSDQLFDWQDRLFDNTNGRLEFSGNTWTSLWPGTGKPGLWTASISRMGALYSLIVREEEIHIAQRKHSNNGQEDDRDEDIELVIPPVFNGCTQVLTADDQKAARDLYWDAVCSGGEDETDWRKVEEILRRCIGRNPFVGEPHLVLAQVLLNMEMYEEAEEQIEAGVKLLLEWGSSWDKRMPWEAWVSWGRAMLIKAKDKDWPHTSFGILSIGLVK</aaseq>

Gene Sequence

<dnaseqindica>1..545#3368..4082#ATGCCTTCGCCGCCGCACCTCGCCGGCGCGCTGGACGCGGCGCGCCCCTTCCTGCGCGGCGAGGAGGAGCAGGTGGACCCGGCGCTCCCCAAGCTGGCCGCCGTGCTGCGCGCCGCCGGCGCCGGCGAGTGCTGGCACAAGCACGGCACCTTCCTCGCCCACCTCCTCGACGTCCACCGCATCCTCCGCCTCTGGGGCGCCCCCGACGCCGTCGCGCGCTGCGGCCTCTACCACTCCGCCTACTCCAACTCCTACGTCAACCTCGCCATCTTCGAACCCGACGTCGGCCGCGACCACGTGCGCCCCATCGTCGGCGCCGCCGCCGAGCGCCTCGTCCACCTCTTCTGCGTCGTCCCGCGCCACCAGCTCATCCACGACGACCTGCTCTTCCACTACGCCGACCAGGACCTCGTCGCCGACCTCGCCGCCTCCGAGGCGTCACTGCAGGACGCGCGGCGCGGGCTGTTCCACCACGACGGCGAGGCCTGGCGGCTCAAGATCCAGCGCCTCCTCCCGCCCCACGGAATCACTGTCAAACACATCAGGTGAGTTAGTTAATTAGTTAATAAATAAATCTTCTTAATTTCTACTGCTCAGCACCAGATGGGGTTACGAGAATTAATTTTTCTCCGACCCTAGATGATGAGTTCATTATGGGAACCGTTCGATTCAGAACGTGTGGTGAAGAATCAATCGGACAGAGTCCATCACAGCATATATCTTGGTTCAGAAAATCTATTCCACGACATCCCGTGGAGACGGGATAGTAATCCGGATCGATCCCCTCCTCCTACCTCACTCTTCTCCCCCAAATCGTTGGAGCCAGCGGCCACCGTCGTCCCCATCGCTGTCGCCCCACCGCTCGTCGGAGCCAGTGGCCGCCGTCGTCCTCGTCGCCGTCACCCCACCGCTCGTCGGAGCCGGCGGCCACCGCCGCGGGGGAGGCGGCGACGACGAGGAGCTTGGCGACGGGTGAGGTGAACAAGAGGGAGAGCGGGAGCGGGGGCGCGGAGGCCGCTGCCGGCGCCGGGGAAGCCGCTGCTGGCTCAGGACCCCGGCCGCCGAGGAGGACGACGACGGCGCGGCCTCGGCAAGGGTCGCCCTCAAGCTCGCCTCCCTTGCCGCGCCGCTCTGGCTCCCCGCTCTCGTCGGTCTTCTCATCGGCTGCCCCGCCTCGCCGACCACCGGATTCGCGCGCCACCTCCTTCTCCTGCTCCACCACGCGGCTACCTCCTCCTCTCTCTCCTCCTCCAGGCCACCAGGTACTAGATATCACGGGTACCAAGTACCAGGTATCACGGGTACCAGATACTAGGTACTAGCCTGGTACCAGGTACCAAAGGTATCAGTCGGTACCAAAGGTACCTACCTAACCAGGTACCTTTGGTAACCCAAGGTACCAGGTATCAGGATGGAGAGGAGGTAGAGGTTCCAGAGCATGTTGCCGCCGGCGTTGCAGTGACCGAGACACCGAGATCGCCAGATTCTTCTGCTTCTATAGCGGCGGAGGAGGAGCCACCTACGCTCACCGGCAAGGAGGCGGCGGGAGCAGCGGGCAAGGATGACGGCGACCTTGGCAAGGAGCGCGAGGGAGGAGGGGAGAGGCCCCGGCGCTGGCAGCGACGAGAGCGCCAGTGGAAGAAGCAGTGCCACAGCGCACGGAGGCGGCGCCGCAGCCGGCGGAGGACGACGTCGTGGAGGTGCGGCGAGATCACCCTCGATGCCGCCCCGACCTCGCCGACGCCGTGCCGTCGTCGTCCACGGGCGCCGGAGACGACGACGACCCCTTCCTCCTGGCCAACTTCATCTCCGCCTCTCGTTTTCTTCTCCTGTGTGAGAGAGTTTGTGGAGGGAAAGAGAAGAAGATAAGGTAGTGGAGATCTTATCCCGTGGCTGCTACGTTGCAACGGAATCTCGTACGGTAGCTGCCCTCTTCCAAAAATAAGCATTTTCTACGTAATTTAGTAAGGATTTGGTCAAAATTTGAATTTAAATTGCCTAGATGCATTTCCGAAGATTCGGATTGGTTGAAAATATGTGGAATTTCGTGTATTAAAATTGGTGTACACATACATAGCAAGACGGTTACCATGGCATCAACCGAAAACCGTGTGAATTTCATCTTCGACGTTTAGAATTTAGAATTTAGAAGTTTTTAAATCTCACGACAACAGCTCGAGTGAAAATCATAGGCATGTCGGATGTCATCATCTTCTACGCTGTTGCTTGGAGAGCATCCGCTGTAAACAATTTTCATACAGTGATACTAGTGTCATCCAAGAAAAATATCAGATAACTATAGATATCAGATCCAGTACCTGAGTATCAAACCTGATACCTATAGATACCAGATCCGGTTCCTGAGTATCAGACCCGTTATCTATATATATCTGACCTGGTACTCATATGTACCATACCTAGTATTCGGGTATCAGGTATGATAATTTGATACTTGAGTATCACGTATGATACATACATGTATCTTATATGGTACATGGTACTTGCGAGCCATTTATAAATCAGGCATCGTGGGAGCCCAACGTGCACTAGTCAATCTCAGTACCAGACATAATAGTGTATCATCAAAGATTATCAAGACAAAAAAAATCTTTTTATTTTTCACAAGCCTCGCTCCATGGCTCGGGAGGCATATTGCCCTGCCAAGACATCTGGCCATGCCTGCCCAAACTCAATTAATATATCACAACTCAAAGTGCCCAACTGAGCAGCTCTCTCGAGCCCTAGTCGTTGAGACCCATGCATGTAGACCGGTCAAGCTGGGGCACTTGCACTAGTGGGAACACGGAATAGCGCATGTTTGACGTGGAGCGACATGTGCGACTTTGGTTTCAGACATGGTAGTTGGGAGCGACGAAGCGCTAGATGCGGAGCAGGTGACGTCAGCACTTATCCTGTTGAAACGGAATCCCGTTGTCTAGCCGTTCTCATCTTGGTTACCAGGAAAAAAACACTTAACAATTCATGACAAAATTAATCTTCTCATACATGTTTTATACGATCAGAGGATTTGGCAGAAAGATGTCTTGACAATTTTACAGACTGTTGTTTATTATACCTGATAATACAAAAGAACATAAGCTCATGTTGGCAGCTAGTGCCAATAAAATTTGGGGAGATATCCAGTAAACATGGGAGTATCTAGTTTGTTTACTGCTGCGATAATAACGTAACTTACAATTTAGATCATATCATCCACAAGTAACTGTAATCTACAGTGCATGAGTACAATGCAAAGGCAAACCAACCCCATGCATAGATAGCAAACAAACTTAGTTGCATTTCGAAGTTGGTTCTACATACTTCGATCAGATTGCACCTGATTTTTGTCTGTACTTTGAATTGGAAGGACTGGCGAGGATGTGGCACTGTCGAGGCGCATCGCGGCAACCTTCCTTCTCATGACAATGGCGGACTTCAGCGACCAGCTCTTCGACTGGCAGGATCGCCTCTTCGACAACACCAATGGCCGCCTCGAGTTCAGTGGCAACACCTGGACTTCGCTCTGGCCAGGCACCGGCAAGCCCGGCCTCTGGACTGCCTCCATATCCCGCATGGGCGCGCTCTACAGCCTCATCGTTCGCGAGGAAGAGATACACATAGCTCAACGAAAGCATAGCAACAATGGCCAAGAAGACGATCGTGACGAGGACATTGAGCTGGTGATCCCACCGGTGTTCAATGGCTGCACCCAGGTGCTCACCGCCGACGACCAGAAGGCGGCACGGGACCTCTACTGGGATGCAGTTTGCAGCGGCGGCGAGGACGAGACGGATTGGCGCAAGGTGGAGGAGATCCTGCGACGGTGCATTGGCAGGAACCCGTTTGTAGGAGAGCCTCACCTGGTTCTTGCTCAGGTGCTTCTGAACATGGAGATGTATGAGGAGGCAGAGGAGCAGATAGAGGCAGGGGTGAAGCTGTTGCTGGAGTGGGGGAGCAGCTGGGACAAGAGGATGCCATGGGAGGCTTGGGTGTCATGGGGCAGGGCGATGCTGATCAAGGCCAAGGACAAGGATTGGCCGCACACCTCCTTCGGCATCCTCAGCATAGGGCTTGTCAAGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA009339