Os12g0608600

From RiceWiki
Revision as of 10:36, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os12g0608600| Description = Similar to Thiosulfate sulfurtransferase (EC 2.8.1.1) (Mercaptopyruvate sulfurtransferase Mst2/Rdh2) (EC 2.8.1.2)| Ve...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os12g0608600

Description

Similar to Thiosulfate sulfurtransferase (EC 2.8.1.1) (Mercaptopyruvate sulfurtransferase Mst2/Rdh2) (EC 2.8.1.2)

Version

NM_001073769.1 GI:115489499 GeneID:4352752

Length

4816 bp

Definition

Oryza sativa Japonica Group Os12g0608600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:25928589..25933404

Sequence Coding Region

25928793..25928891,25928976..25929043,25929466..25929529,25929729..25929810,25930394..25930452
,25930555..25930614,25930775..25930937,25931127..25931251,25931989..25932051
,25932255..25932314,25932863..25933086,25933228..25933324

Expression

GEO Profiles:Os12g0608600

Genome Context

<gbrowseImage1> name=NC_008405:25928589..25933404 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:25928589..25933404 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggccaccctcctctcccgggccgctgccgccgccgccgtctccctccgcggcgcccgctcgcaccacatactgtcctcctccctccccaaggggggaagagtcggatgggcgcgcgccgccgaggagggcgccgggttcgggtgcagggcgtcggtgccggcggcgctggggggcgtcggttcgttcgggatcgcggcgcgctgcaacgccacctcgtcgtcggccgtttcggaggctaccaacgcgctgccgaggacggagcccgtggtttcggccgagtggctgcacgccaacctcaaggaccccgatgtgaaggtacttgatgcctcttggtatatgcctgccgaacaaaggaatcctcttcaggagtaccaggtggctcatattcctggggcgctattctttgatgttgatggaatatcagacagaacatcaagcttgccgcacatgctgccatctgaaaaggcattttctgctgctgtatcttcgcttggaatatacaacaaagatgggatagtagtttatgatggaaagggactatttagcgctgctcgtgtttggtggatgtttcgtgttttcggacatgataaagtttgggtgttggatggtggtttgccccaatggcgtgcttctgggtatgatgttgaatcaagtgcctctagtgatgccatcttaaaagccagtgctgctcgtgaagcaattgagaaagtttatcaggggcagttggttggtccctccacatttgaagcaaagttgcagcctcatcttatttggaatcttgaccaggtaaaagagaacattgatgccaagacacatcaacttatagatgctcgaggaaagcctagatttgatggtgcagttccagagccacggaaaggaataagaagtgggcatgtgcctgggagcaaatgtgttcctttccctcagttgcttgacagttcgcaaaagctattacctccagaagagctccgtaaacgatttgaacaagaaggtatatcgcttgatcaacccctggtgtcctcatgtggtactggtgtgacagcatgtatattagctctgggcctccaccgccttggcaaaaccgacgttcctgtatatgatggatcatggactgaatggggagcccatcctgacactccagttgccactgctgcttaa</cdnaseq>

Protein Sequence

<aaseq>MAATLLSRAAAAAAVSLRGARSHHILSSSLPKGGRVGWARAAEE GAGFGCRASVPAALGGVGSFGIAARCNATSSSAVSEATNALPRTEPVVSAEWLHANLK DPDVKVLDASWYMPAEQRNPLQEYQVAHIPGALFFDVDGISDRTSSLPHMLPSEKAFS AAVSSLGIYNKDGIVVYDGKGLFSAARVWWMFRVFGHDKVWVLDGGLPQWRASGYDVE SSASSDAILKASAAREAIEKVYQGQLVGPSTFEAKLQPHLIWNLDQVKENIDAKTHQL IDARGKPRFDGAVPEPRKGIRSGHVPGSKCVPFPQLLDSSQKLLPPEELRKRFEQEGI SLDQPLVSSCGTGVTACILALGLHRLGKTDVPVYDGSWTEWGAHPDTPVATAA</aaseq>

Gene Sequence

<dnaseqindica>4514..4612#4362..4429#3876..3939#3595..3676#2953..3011#2791..2850#2468..2630#2154..2278#1354..1416#1091..1150#319..542#81..177#atccacctcttccccttcttcctctcgcttccgccaccaaccccttcgcgaaccttctagaaccccccaaaaccctatccatggcggccaccctcctctcccgggccgctgccgccgccgccgtctccctccgcggcgcccgctcgcaccacatactgtcctcctccctccccaaggaaaccctccttcctcctcccctcctcatcctcctcgccaccaccatcgcctcgctcctcgcggtcgtactccgacgccgctccgccttctccctgatctctccggcctgacggtggtttgtgtgttttgtgcgggtgcaggggggaagagtcggatgggcgcgcgccgccgaggagggcgccgggttcgggtgcagggcgtcggtgccggcggcgctggggggcgtcggttcgttcgggatcgcggcgcgctgcaacgccacctcgtcgtcggccgtttcggaggctaccaacgcgctgccgaggacggagcccgtggtttcggccgagtggctgcacgccaacctcaaggaccccgatgtgaaggtagtgtgcgcagtgatgggactgtagcgatctgcggttgacctgtgaaattgttgcatatactgtgctacaactaataaactggaagataatttttgtgaattgttgcatataccgtgctacagctaataaactgatagtgaattgctagttgctggcgttctaccatgctggcagtttgattgatgatggaagagagatataaatcgtaggaggatggctagtgacttattattgctgagtttgtcgcgttagctgtgcggattgatggttgaggaaaagcatgaggtctttgtactacagactacagcacattcaggatggcactggctttccattggctactttcgcttttacaacagaagctgcatttgtattaaagttctttttcatatgcattatgatatactctcagtaggataaatgagtctagtataataataacactataacagtagtcactggatagttttcttttccctgttaaaaatgtttgtcttccttgaatccactatatctcattgaatcatcctcttgtttctgtcaaggtacttgatgcctcttggtatatgcctgccgaacaaaggaatcctcttcaggagtaccaggtagcgattacatgccatactgaggttttgcagttttggaattcttaccacctgctgtgacgccatttttcttatctgattgtttatatgctcttattttcactggttccttgttaccttaattttctgtttttatcagttcatttgaaattatagtagcagaagttctgatgctttcatatgcattttaatcttgtttccaggtggctcatattcctggggcgctattctttgatgttgatggaatatcagacagaacatcaagcgtaagttcaactcactagcttgttttttcatttactactagctaatcatatgaactttctttatgtgccacatcatcctgcttttctgatgttattttttattaatataacattataaattgccagaatatgggcttgtgctatgcaaatttaggggctggtaaacccaattccttaaatacatgaagcgaaagcatttagttcagtatgtcaatacatttaagttccactcatacaggtcaacaaaaatagctttaggcaacaccagaaggtaaaaggttgaagctggtgaagtaaaacagggactgacagatcacaacacggttgataacatttgtgtgtgttgtgatctggtggtctgtcccaatcccctgattggtgtaaaaaaagtgataataagttactcaagtttgatttctttcagatcacgtcaagcttttatattgtactagctggtgtaatggcacttaaattttctttccctttctccttgactgtatttttcatctactactgtcaatcttcatgataaaaaagtaacactaataaattaacatgtttttttaatcctgtttggttaagtagatcaacaattcaacataatgcccttattatgataggaatatgaattgcaaaacatggcatcattcttgatttctttgtgttggttattgttgagctgattaattgtttttcggcatgcttgatatcattgaatgtattatcttttgagtcagttgccgcacatgctgccatctgaaaaggcattttctgctgctgtatcttcgcttggaatatacaacaaagatgggatagtagtttatgatggaaagggactatttagcgctgctcgtgtttggtggtaagctgcttcttcttgaaaccaaagtaaacatcaagagtagaattcaggcagaaacgacagacaatcttttttccccttaaatgatcataagccgttcttactagtgcatttgcaatatgttcctttgttgttaattttgataattgaattaaatttcatgtgcgatgcctgcttccttgatatcaggatgtttcgtgttttcggacatgataaagtttgggtgttggatggtggtttgccccaatggcgtgcttctgggtatgatgttgaatcaagtgcctctagtgatgccatcttaaaagccagtgctgctcgtgaagcaattgagaaagtttatcaggggcagttggtaagttgaattaaacctctattttgtttgttctaacatttggaccttactcctgttatgtacttgtcaacccctgaatcgtgatactcatgctagtagctgctgtgaatggtgcttagcttgaccttcagtcacacataactttttattatctttgtaggttggtccctccacatttgaagcaaagttgcagcctcatcttatttggaatcttgaccaggttagaggtcttcaggctgaaaatcttgcccatacatttcttcaccatttattaaactcagtcgcatgtttggtataactagttcatgattttttttctcaggtaaaagagaacattgatgccaagacacatcaacttatagatgctcgaggaaagcctaggtaaatctgctattttaattctggaaaagtccagattatataccatacacgattacatgtatataaagcctttacctttatgcttaaggatccattgggttatggtggattttataaaaggcacttccaattttggagacaatggcaaaattttgcaggaatcattcgatattcaagtaatgaactaaattctacacggcagcagaccctgtcgtcactggctacagaccatgttcctccctaggcctagtacattgatttggataatatatccatagactcactagtatctgtcaagatcttcattgccaataaagtcggctgtttggcttttgcctttttaagtaatctttttccagttcaaccatgattccatgtaacacctcaccaacatagtaggcattccagactcttatggtgttttatcttttcgactcttctgacttgtttttttttgtgtcagtaattgcggtagatttgccatattacctcataaaaatgtgaatgcttcaagcttcattgggttgtgtctttgtaatgttggtcattggtcttgaatactaacatgaagctttcacttcagatttgatggtgcagttccagagccacggaaaggaataagaagtgggcatgtgcctgggagcaaatgtgttcctttccctcaggtggagacttgcaattatccaatcaacttgtactcttttggacataaattttggataattacttttacctgatctttggttgtctttggtctcattggattaattatttattcgggttcatttgtgaccatatttttgtatttttaatctttgtgtattaccaattctttttgctgaatctttgtttgttcttctgcagttgcttgacagttcgcaaaagctattacctccagaagagctccgtaaacgatttgaacaagaaggtaatatttttatccagataaagtttcaaattctttctgtctgctgacaatgccctgcttagccatgtttgcaatcctattccccattctgaaacatgcctatatcttaaccatgaacctaatgttttggccttctgggtcttttgaaacattaagagcctcttatttatatttttgtataagttgatggttgagttaattaaccaactagtgccaggtgttgtcgcttatatgattgtaatgaccaggcatgacttcttgcagtgctttgtttattggtagtggttgttactagcatcatttttctgtggtattttgatgtagatctgtggtagcaagtatgaattatgaaatataaaattatggcaacatctttggtaatattggcaataactttactactttgttgtgatattcgtcaggtatatcgcttgatcaacccctggtgtcctcatgtggtactggtgtgacagcatgtatattagctctggtaagactacctgtgacttggaagttcacaagatttactttgcaattgttacattacgtcgcataacctatgctttcttcttagggcctccaccgccttggcaaaaccgacgttcctgtatatgatggatcatggactgaatggggagcccatcctgacactccagttgccactgctgcttaattagtaccagttacaatctattggagaactcttgattatacttcccctgtaccgtgaatggtccaatggaaggaagaaagcaaaggagattggagaggtcggctgggcgtaggttggggggaagggacgccattagaccggccttttcgttgtaaatggttttgaaaatagacatacactgtgaattattatgagctgttgatc</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0608600, RefSeq:Os12g0608600