BGIOSGA014029

From RiceWiki
Revision as of 03:51, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA014029| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA014029, complete gene.| tag = OsI_180...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA014029

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA014029, complete gene.

LocusTag

OsI_18056

Ensembl Transcript ID

BGIOSGA014029-TA

Ensembl Protein ID

BGIOSGA014029-PA

Length

6341

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:34627305..34633645

Sequence Coding Region

34633397..34633645,34630628..34630708,34630430..34630548,34627946..34628074,34627305..34627725

Genome Context

<gbrowseImage1> name=IndicaChromosome04:34627305..34633645 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:34627305..34633645 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCCCCGACTTCCCAACCTCAACCTCAACAGGAGGTGGAGGTGGAGGTAGATGAGGATGAGGAGCTAGTCAACATGGTGGTGGAAGCCGGCGTTGGCGCCATCAAGATGAAGATGAAGATCCCCCGCCGCGTATTGGGGTCGCTCTACCCGCACCAGCGCGACGGCCTCGCCTGGCTCTGGGCGCTGCACTGCACCGCCACCGGAGGGATCCTCGCCGATGACATGGGACTCGGCAAGACCATCCAGGATGCTGTATCTATCGAGGGCCATAAGTTCCTGCGTATTGATGGTACCACCAAGATATCTGAGAGGAAGAAGATTCTGAAGGACTTTCAAGAGGGGCTTGACAGTCCAATATTGTTGTTGACCTCACATGTTGGTGGACTTGGCAATACACTCACCAAGGCAGATCGGGTTATAGTAGTTGATCCTGCTTGGAATCCAAGGGATGAGTCCTTGAAGAAGCACATCCAGTTCTTGGAACAACAAGGTATAGCTGGCGTGAACCGTCATGGCGTCCTGTTCTGTAAAACTGAGACCACTGCAACTTTGGGTGACGACGGTGCAATAAACAGGAAGGTGAGAGACATTATGGTGAGGCGCTGCTATGCTCCTTGGGAGCACATTTGTAGAGATGTCGAGAAAAAGAGCTTGATCGATCAAGTGAAGGAGATGAGCAAGAAGATGGATGGTTTGGGAGATACAATGGGACGGATTGTTGCTTTGGAGGAGGAGTATGCAGCCGAGCTCATTGGAATGCTCCATGAAAACAGGTGGGAGAGAAGCCATCTGGAGAAGATAAGGATGCAGATCGACGATCTGCATGAGGAACACATGGCAAAGTTTGATGAAATGCTGGAAAGGATCAAGAGGATGGAGCTGGCTGATGAGGGTGAGTTGATAGCCAAGTTTGGTGAAATGGTGGAGAGGATGAGGCAGAGATGCGACATGGATAGATTGAGCCTGCCGCTTCTGTCTTCTACCCTTGTAGCGTAG</cdnaseq>

Protein Sequence

<aaseq>MAPTSQPQPQQEVEVEVDEDEELVNMVVEAGVGAIKMKMKIPRRVLGSLYPHQRDGLAWLWALHCTATGGILADDMGLGKTIQDAVSIEGHKFLRIDGTTKISERKKILKDFQEGLDSPILLLTSHVGGLGNTLTKADRVIVVDPAWNPRDESLKKHIQFLEQQGIAGVNRHGVLFCKTETTATLGDDGAINRKVRDIMVRRCYAPWEHICRDVEKKSLIDQVKEMSKKMDGLGDTMGRIVALEEEYAAELIGMLHENRWERSHLEKIRMQIDDLHEEHMAKFDEMLERIKRMELADEGELIAKFGEMVERMRQRCDMDRLSLPLLSSTLVA</aaseq>

Gene Sequence

<dnaseqindica>1..249#2938..3018#3098..3216#5572..5700#5921..6341#ATGGCCCCGACTTCCCAACCTCAACCTCAACAGGAGGTGGAGGTGGAGGTAGATGAGGATGAGGAGCTAGTCAACATGGTGGTGGAAGCCGGCGTTGGCGCCATCAAGATGAAGATGAAGATCCCCCGCCGCGTATTGGGGTCGCTCTACCCGCACCAGCGCGACGGCCTCGCCTGGCTCTGGGCGCTGCACTGCACCGCCACCGGAGGGATCCTCGCCGATGACATGGGACTCGGCAAGACCATCCAGGTACTCTTCTCTTCTTTTCTCCTCTCCTCCACCTCCTCCCATCCTAATCCACTGGAGTACATCAATCAATGTATGGTCTCACAAGGGCAAGCCCGGGTCCAAATCCAGGTTTCTGCTTTGCTGGCCGGCTTATTCCATTCCAATTTGATCAAGAGAGCCTTAATTGTCGCCCCTAAGACTGACTTGACTCACTGGGTAAATCACCTCTCACTCCTCGGCCTTCAACACCACATCAGACTGTAAGAAGCCACATCTTTACTTACATCCACACATCAATCACTGCTTTACTTCTTCTCTAATTAATCTGCATTCCGCCAGCTACTCTGGCCCTAGCCTAAACGATCGCTGCTATCAACTTAACTGCACCTTCAAGGTCTCATCTTAACTTTACACTTCATCCTCAATTCATCTTTCCATCAACCCATTCCATACTTGTACACTACTTGCAAGTTGAATCTTTCACCAGGAGGGTGGCATTCTACTAACATCCTACCACATCGTCCGGAATAATTACATGTTACTAAGAGGCAATGGCAACGGTAACAATGTTGACAACAACGAAGAAGAACCACTGTGGGACTATGTTATTCTTGACGAGGGCCACATTGTCAAGAATACAAAGACGCAAAGGGCACAGAGCTTGTTTCAAATACCTTCTGCTCATCGCATTGTACTCACTGGAACACCTATTCAAAATAAATTAAAGGTACCCTCATCTCAAATGACTTTTCCTCTAACCTTTCTATTTATCTTCTTTTACTTCCACTGAGCATCACTATTCTGGCAGGAAATGTGGGCTTTGTTTTATTTCTGTTGCCCAGATGTCCTGGGTGATGAGGATGCGTAAATCACTTAACTCCCCCTTGTTTCTTATACAATACTTATGCAAAATCAATCTATACTTATGAATATTTATTTTGTAAAGTCAAGTGTTGTGAGATTCTCTTGGTTACTGCAGGTTCGAACTTAGGTACGAGAAGCCAATTCTTTGTGGAAATGACAAGAATGCTACTGATCAAGAGAAGCAAATGGCTTCAAATGCAGCAAAAGTATGTTCTCTTTCGACATAATAAGTTTGTGCCTGATGTACTAATCTTGTTGCATCATTTGTTTTGGTCTGTTCTGAACGCTATTAATCACAGGAATTAAGAGAGCGGATTAAACCACACTTTCTCCGTCGTATGAAAAGTGAAATATTTGTAGATACTGGCGCGAAAGATGACAAAAGGCCACCTCAGAAGAATGAATTGGTTATCTGGTTAAAATTGACATCTTGCCAGGCAAGTGCCTTGCTGTTCTGCTGCAAACCTCTATTCCATTTATAGAACTCCTTGGGCATTTGACTCTGGTATTCCACCAGTATACTATTGCTCTAGGTTTTGTATAATGAAGGTGTTGGGAGTATAAAAGGGTTATGTGTTTATGCTTTATAGATTATTGATGATTTTGTTTCGGGTGCAGAGGCGATTGTATGAAGCCTTCCTGAATAAAGATCCAGTTCGTTCACAAACTGGAGCATTGAAGGGTTCATCCTTGGAAGCTAGCACGGTATTTATGTACTGACTGTTTTTACTTTCATCATTTTACCTACCGTCTGCTTCCGTTGACATTAAGATGTCACTCCTTGGAGTGAATTGAAATTTTTAGTATGCCATGTTCCATTTACTGTTGGTAGATTTTTGAAGAAAATATGTAATGGTGCATCGTGCATGCATGTGTGTGCTCACTTGTTTTAATTCAACACAAACAGATTTTGAGGAAAATATGCGATCACCCTCTACTTTTGACTAAAAGAGATACTGATGATTTCCTGGAAGAAATGGGTGCCATGCTGAATAACCGAGATATGTGCATGGTGGAAAGGATTCTTGAAGATAACCTTTATGCTGACAAAAGACTACAGATTGTCCAAGGCGCCTCCTGCAAGATAGCTTTTATCCTTCCCTTACTGGTCAGTGCTTCTTTTATGAAATGTCCATTTTATAGTCCCTCCAGTCCATGGACAAAATGTGCTTAGTATATGGAGCAATTAAACTTATTAAATTCTTCTCCCTGCAATATTTACTTATATCTAGACTGGCTAAAAGAAAAATTATATAGATGTGTACTTTATCTGGATATATCATAACGTAACACTTGTATAGATTATTCCTGTATTTTAGCAAGTCAAAAGGCTACGTTGGATGTTCTGCAGAAGAAAAATACAATATGTTTCTGATATAAAGGGATTAATGTGCCACTTCCTATGAAAAATCATGCTACATTTTTTTATGTTGCAGAGGAACCTTGTTGAAGAGGGCCACTATGTTTTGATATTTTCACAGACACGTGTAATGCTTAACCTTATTCAGGTATAGCCTATTCTTATATTAACCTTTATTTGCTTTATCATGCATGTGATGTGCTTGTGATATTGCTAACACTTTATTTGATTCAATTTGTAAAAGTTTCCCATTTGAAAACTATGCTTTGTTACTGGAAGAATCATATCGGTAGTTAATTGCTGTCAGTAATCATGCCATACGTGTGTCCATGATTACCTGTGTCTTGTATCATATATGCTTTCAGTATAGAATTAAAATGCCTTTAGTTGTTTACTAATCTATATAAAGTTTAATAGCAAGCATTGCATTGTTGAAATGTCTGTTTAATCTTCGGATAGTTGTCATAATCATTCCAACAAAGCAGGATGCTGTATCTATCGAGGGCCATAAGTTCCTGCGTATTGATGGTACCACCAAGATATCTGAGAGGAAGAAGATTCTGAAGGTACCTCCTTATTTTTTTCACATTTTTCTGTCTGTTATGTTAAGCCATGGATTCCATAACATTGCATTGCACCCTCTAGGACTTTCAAGAGGGGCTTGACAGTCCAATATTGTTGTTGACCTCACATGTTGGTGGACTTGGCAATACACTCACCAAGGCAGATCGGGTTATAGTAGTTGATCCTGCTTGGAATCCAAGGTACCCAGCAATTCTAAATTGTGAATGCTTTACATCAACTTTCTTCAATTAATCATATATGTTTTTTACTTTATAGCATAGATAACCAAAGTGTCGACCGTGCTTATCGAATTGGGCAGACTAAAGATGTGATTGTATATCGTTTGGTAACTTGTGGGACCATTGAGGAGAAGATTTACAAGCAACAGGTATTTAAACTGTTAAATGTAAATCATACTTATATAAGGGCTTATATGAAACAGAAACAACTAGAACAGTCTGTCGATGACATGGGACCGGGAGTATCATGACTAGAGGTTTGGGCAGGAGCAAACACCCACGTGGCCTGACCCCCTCGGGGGGGGGGAGGGGGGGGTCGGGCCCGAGGGTGATGAGGCCGCCCCTCTCTTTGTCTCCCCGAGGGGTCAGGCCGCTCCCGTTTCGGCCCCGAGGGCCGAGGCGCCCCGACCCCTTGTGGGTTTTGCGCCGCGTGTATGGGTTAGGTGAGCACAACGGGGCTCACCTAACTGCATTTATTGCGGTTTGAACGAGCGCGTCACGCCGCATGTAACGCAGTACAGCGCGCTCGTTTATCCGGTCTGTGACCGATCACAGACCGGTCAGATCGTGGGTTAGGTGGCAACAGGCGGTCTGACACACGCCTCGCCCCATCCCGTCAGGATAAAGAGCCTCCAGGCACTTGTCCCTAGCCGGAGCCAGCGTGCTGGCCCCTAGAGATGGCACGTTGGTTCCGGTCAGATATATACCAGGCTTCATCCCAACCGTTACAAGCAAGACGTTGTATGAAGAAGGGCGAACATGCAGATTGATAAACTGACACGTGGTGGACAAGAATGACCGATTTGTGACCGGCCTGACACTGGTCATGTCGTCGGCAGACAGCCATATTCCCACATCGCACCTGCTTCCGGCGGAAGTGGAGGTAGGTATGGGCCGTCCCATCAGAAGGTCATTCGGACGGCAACCATTACAAATCTCCGCCCATTTATGAAGGAAAGGCGGGCCAAGTTTTGGGGAGAAGAGGATGGGTCCCCACCAAAAGAGGAAATAGGTAGAAGTGGTGCATGTGGTATCCCCTTAAGATATAAAAGGAGGACCTTGCCCACTTAGGAGGGGGGCCTGATCCTGATCCGAGAGAAAAAAGAGGAGGAAAGGGGTTTCTAGAGTTGGAGCTCTCTGGCTCTCCAGCTCTTTGTAGCTTCTTCATACACAGATCTACCAGAACACAGGAGTAGGGTATTACGCTTCTCAGCGGCCCGAACCTGTATATATCGCCTGTGTCTTGTGTGTTTCCACTTGGGCGAACGTTCCACAGACTAGGAGCTTAGAACCTCACCCAGAGCCCCTGGCCGAACCGGCAAAGGGGGACTTGCGCGGTCTCCCAGTGAGGAGCCCCACGCTCCGTCACAGTCTGAGCTCAATCATCTTCATCTTCCATCTCTTGGAAAACCTGACCTTTTTCTTTTGTATGTTGATCGGTACAAGAATGCAGCAAGTTATTGTATGGATAACAAATGTTAATTTACAGGTGCAATTTCCATGTTAATTTACAGGTGCAATTTCCCTTTTTTTGCTGTTTCAGATCTTCAAGGGAGGTCTTTTTAGGACAGCTACAGAATGCAAAGAACAACCGCAATTTTATAACCAGGATGTATGCCATACCTTTTCTTGTCAATCACAACTGCAATTCAGACTGTGACGTACTCTACACTATATCACAATATCGTATTGGAAGTTATGGTTCATTGGTTCTTTCCTTTCCATACAGCTTTACCTTCAGAATGAACAAGAGTACTCTAGTTTGCCGCCACATGGGTTTGACGCCTCTCTCACCCAACACAAAATGCAAGTGGAGAATGGTCAGCAGCTTGTCATGTGAGAAGTCTGCTCCGGTTCTTTGTTATATTCAATACCATCGAAATTGTACTCAGTCTTTTATTACTGGTAGTTTCTCATCCGTACTAAATTACAGTTTCTTTATGGTCCTCAAGAGCTGGAGGTATTTCTTAGTATTATTTTTTTTCACACCTGCCAATTTGTAATTTTTTTGGGATACACGTGAACATAGTTTCCATCATTTGATAGGTTGAATGCCAAAAGGTTCAAGTTTCAGAAGAAACATATTCATACTCTGGTATCGATCAGTCAAAAACTGCACACCAAAGTGGCAAAGTGTATAGATTTTTCAATGGATTTATTCTGGGGATACCGATGTCAGAACCCTCGTTTTGTTGCCCTGGCCTTCCTCCAAACCGAAGTGCTAGTTTAAAAATAAATTTAAGTAACTTTTGATAATTGTCTGTTTGTGTATGGGTACAACTTTTTTATATTCCATGCTTTGCACATATATCTCAGGGATGAGTCCTTGAAGAAGCACATCCAGTTCTTGGAACAACAAGGTATAGCTGGCGTGAACCGTCATGGCGTCCTGTTCTGTAAAACTGAGACCACTGCAACTTTGGGTGACGACGGTGCAATAAACAGGTCTGTCATTTCTTACTCATTTTTCAGTGATCCCACTTATAGTTTTGTTTTTCAGAGATCCTGTTATAGCTTGCTGTGTGTAGAATCGATTGTATAGTTTCTTCTTCCTGCATTGTTTTATGCCCTACAATTTTTTTTCGTTTTGCTTTCACGAGGTACGACTGTCCCTGGACTTCCTTCTGGGTTCTGGCATGTTTTTGAACATGTTATTTATGCGCAGGAAGGTGAGAGACATTATGGTGAGGCGCTGCTATGCTCCTTGGGAGCACATTTGTAGAGATGTCGAGAAAAAGAGCTTGATCGATCAAGTGAAGGAGATGAGCAAGAAGATGGATGGTTTGGGAGATACAATGGGACGGATTGTTGCTTTGGAGGAGGAGTATGCAGCCGAGCTCATTGGAATGCTCCATGAAAACAGGTGGGAGAGAAGCCATCTGGAGAAGATAAGGATGCAGATCGACGATCTGCATGAGGAACACATGGCAAAGTTTGATGAAATGCTGGAAAGGATCAAGAGGATGGAGCTGGCTGATGAGGGTGAGTTGATAGCCAAGTTTGGTGAAATGGTGGAGAGGATGAGGCAGAGATGCGACATGGATAGATTGAGCCTGCCGCTTCTGTCTTCTACCCTTGTAGCGTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA014029