BGIOSGA014069

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Revision as of 03:52, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA014069| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA014069, complete gene.| tag = H0124B0...")
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Gene Name

BGIOSGA014069

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA014069, complete gene.

LocusTag

H0124B04.13

Ensembl Transcript ID

BGIOSGA014069-TA

Ensembl Protein ID

BGIOSGA014069-PA

Length

4885

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:34013014..34017898

Sequence Coding Region

34017632..34017898,34015583..34015815,34013014..34015519

Genome Context

<gbrowseImage1> name=IndicaChromosome04:34013014..34017898 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:34013014..34017898 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGAATCCATTTCCTCATGCTGCTGCTGCTCTCGATCCATCCTCAGTTCTCACGCACAATACAAACACACACACACACACAGAGGGAGAGGGAGACGCAGGGTCACCACCTAATCACCACCACCACCTCCACCACCTCCTCTCTTCTCGGGATTGTTACTGCTCCACTCACTGCTTGGCCCTTCTCTCACCTTCTTCCAACTTCCCCCTCTCCTTCTACTCCCCTCCAGGATCGAACCCCGCGCGCTGCAACAAGCCTGGCATTTTGAACCTCTTCTTTGTGAACCAGTTGCAGGCACAATTACGAGGTGGAAAAGTGACTTTGGCTGCTCAGCAGGAGGGTTTCAGTGACAAGATGAATTCTGGTGCTGAATATGAAGATGGCAGTGAGGAAGAAGAACCATATGAACGTGTGTTTTATGATGATGAAGACGATGGCAATGATGATTCAATATGTGGGGATCCCTGTGATGATTCAGTACCAAAAGAGGAGGTGCACAGTACTTGCAGGAAGCTTATGCATGAAGCAGAGCCATATGATGATTTGGTGGCTGGTGAGGAGGAATCTGTTGAGAACTCTGCTCTGCAAGCTTTCAAGAAGGAACGAAATGAGCAAGAGCTCAAGCAGGCCCAGAAAATGGGTTACAGCATTAAGCAAAAGGAGATACCAGTGGACAAGGAAATGGGAATGAAACCGTTCAAAAAACGGCTTGTCAAGTTTGCTGATGATGTATCTTGTTACACATACAGTACCGAGAGTTTTGCTGCTGCAAAGTTGGAGAAAAGGAAAGCTCAGTTTGATGACCAGGACAAGCACCTCCATAAGAAACAGGAACACACTCCACCTTCGTTTCCTCAGGATGGTGGCAAGCTGAAAGAAGTGGACAACACTAATCTGTATGTGGGCAACCTACCTGCTTCTGTAGGTTCTCACAAGCTCATCGAGCTATTTCTACCTTTCGGTCAAATTGTCAGATCAAGAGTTGTGGATGATTGTTTCACTGGTTTGAGCCAGGGATATGGCTTTGTGAAGTATTCTGATCCTCGCTGTGCTTCTGAAGCTATTAAGCGCATGAATGGGCGCTTGGTTGAAGGAAGAGCTCTAGAGGTCAGAGTAGCTGGTTTTCCATCATCAGAGGATAATAGCCAGCAGCCTTCAAAGGAAACTGACATGGCTAAATTGTATGTGTGCAACCTTTCCTTGTCCATGAACACAGACAGGCTGATTCATCTTTTTCTGCCTTTTGGGGAAGTAACTAATGCAAAGGTGGCCAAAGATCACACAACAGGCTTAAGTAAAGGATATGGCTTTGTGCAGTACTCTAGTCCTCACCATGCAGCTGAGGCTGTCATCCATTTGAATGGACGTCTTGTCGATGGAAGAAAGATAGAGGTTCGAGTATCTGGCATACCTTCAACACTGCCAAATTCAGCTGTTGAATCACCGAGCACCACCAGAACCGTCAAGGAAATTGACATGTCTAATCTGTATGTCTGTAACATGCCATCGTCAATTGACACCAAGAAGTTGGTTGAGCTTTTCCTTCCATTTGGTAAGATCACCCATGCAAGAGTGGTGGCAGATCCTGACACCTTTTCAGCCAAAGGATATGGTTTCATCAAGTTTACTGATTCTGAATCTGCTACCAAAGCTATTGCAGCAATGAATGGAGCATTGGTTGGAGGAGAAATGATAATTGTCAGAGTTGCAGGCCTTTCCCCATCAGCATCCATCTCAGCTGTACAGACCACTCAAGACATCAACAAGTCTAGACTATACATCACTAATCTTCCACGGTCGATGACTGCCGATAAGATGGTTAATCTTTTCGCGCCCTTTGGTCAGATCACTAAAGTCCTGATGAATCTGGAGTATAGTCTAGTGTGGTATGCAGATGCACCCTCAGCTATCAAAGCTGTCCAACACATGGATGGATACATGGTTGAAGGAAAGAGGTTAGTGGTCAAGAGATCAGAGTTATGTACAACCAACGCTTCACAAGCAGGTGGCAAGCCAATCAAGGAAATCGACATGGCCAATCTCTATGTTGGCAGGGTTCCATCAAGTTTAACTGAAGATCAATTCATCGATCTCTTCCGCCCATTTGGACGAGTTGTTCAAGCTAGAATGTTTCGATTTCAGAGGTATGGCATGGTTAGGTTTGATAATCCTTCATGTGCTGCTGCAGCAATTGATCATTTGGATGGCTACCAGATTGGTGGAAGCATACTGGCTGTGAGAGTCGCTGGGCTTCCAGCAGAATCCAATGCAGCCAAGGGTGCTCTGACATCACAGATGTCTTCTAATGAGCAGGGACAAATCGACATGACTAACCTTTATGTGAGCCATCTCCCGAGCTATGTTAACAACGAAAGACTTATCGACCTCTTCCTACCATGTGGCCAAATCACTCAAGCAAAAGTAGTTGTTGAGAGATACACTGGTGTGAGCAAAGGATTTGGATTTGTCAAGTTTGCTGATGCTTACTCTGCTGCTGTGGCTCTCACTCACATGAATGGTTACCCTCTGGATGGGCATGTGTTGGAGGTTAGGATAGCTGGTGTTCATCCAGATGCTATGAGCAGTTACATGGCGCATTTCTACTCCCACTTCACAATGCATGATCCCGCAAAGGCGGCTGTCGGAATACCTACGTCCTATTGGCCGCACTATTACGATGAATCCGCATACAATACAACAGCTGAGAACCTGGGCCAAGTCACCACTACATCTGCAACCGATGCTTCTGCTGCTCAAACATCTCAGAAGGAAAGGTTGCCTGGATCTAAATCAGTCGATTTGGTTGCTGAGAAAGATTGCTCTTCTGCGTCGAACAAAGTTGCCCATTGTTCTGAGTCACAGCCAACAGCTTGGGCTGGTCCACCTGGCTTTGAGCCTCATGCCATCTCCAAGAAATGTACTGCTGGGTCCAATGCTTCTCAAGCTTGTTCAAAGGATCATTTTGCACAGTCAGGAGGTGGCCACAAAAGGCGTTCAATCGTCTAG</cdnaseq>

Protein Sequence

<aaseq>MNPFPHAAAALDPSSVLTHNTNTHTHTEGEGDAGSPPNHHHHLHHLLSSRDCYCSTHCLALLSPSSNFPLSFYSPPGSNPARCNKPGILNLFFVNQLQAQLRGGKVTLAAQQEGFSDKMNSGAEYEDGSEEEEPYERVFYDDEDDGNDDSICGDPCDDSVPKEEVHSTCRKLMHEAEPYDDLVAGEEESVENSALQAFKKERNEQELKQAQKMGYSIKQKEIPVDKEMGMKPFKKRLVKFADDVSCYTYSTESFAAAKLEKRKAQFDDQDKHLHKKQEHTPPSFPQDGGKLKEVDNTNLYVGNLPASVGSHKLIELFLPFGQIVRSRVVDDCFTGLSQGYGFVKYSDPRCASEAIKRMNGRLVEGRALEVRVAGFPSSEDNSQQPSKETDMAKLYVCNLSLSMNTDRLIHLFLPFGEVTNAKVAKDHTTGLSKGYGFVQYSSPHHAAEAVIHLNGRLVDGRKIEVRVSGIPSTLPNSAVESPSTTRTVKEIDMSNLYVCNMPSSIDTKKLVELFLPFGKITHARVVADPDTFSAKGYGFIKFTDSESATKAIAAMNGALVGGEMIIVRVAGLSPSASISAVQTTQDINKSRLYITNLPRSMTADKMVNLFAPFGQITKVLMNLEYSLVWYADAPSAIKAVQHMDGYMVEGKRLVVKRSELCTTNASQAGGKPIKEIDMANLYVGRVPSSLTEDQFIDLFRPFGRVVQARMFRFQRYGMVRFDNPSCAAAAIDHLDGYQIGGSILAVRVAGLPAESNAAKGALTSQMSSNEQGQIDMTNLYVSHLPSYVNNERLIDLFLPCGQITQAKVVVERYTGVSKGFGFVKFADAYSAAVALTHMNGYPLDGHVLEVRIAGVHPDAMSSYMAHFYSHFTMHDPAKAAVGIPTSYWPHYYDESAYNTTAENLGQVTTTSATDASAAQTSQKERLPGSKSVDLVAEKDCSSASNKVAHCSESQPTAWAGPPGFEPHAISKKCTAGSNASQACSKDHFAQSGGGHKRRSIV</aaseq>

Gene Sequence

<dnaseqindica>1..267#2084..2316#2380..4885#ATGAATCCATTTCCTCATGCTGCTGCTGCTCTCGATCCATCCTCAGTTCTCACGCACAATACAAACACACACACACACACAGAGGGAGAGGGAGACGCAGGGTCACCACCTAATCACCACCACCACCTCCACCACCTCCTCTCTTCTCGGGATTGTTACTGCTCCACTCACTGCTTGGCCCTTCTCTCACCTTCTTCCAACTTCCCCCTCTCCTTCTACTCCCCTCCAGGATCGAACCCCGCGCGCTGCAACAAGCCTGGCATTTTGGTATGTATTTCTTTTTTCTTTTAATTTTTGTGTACTAGTTCATCCGCTTGGAACATGGTACATGGTTCTTGGCCTTCTGGGTTCATCTTCTTGCTGGGAAGCAATCGGTTTGATTGTTAACCCCCCGCGATCTTCAGCCAGCGTGCGTGCTTCTTTTGTTTGTGCTGTGCGATTGTGCCGTGGGGTTTGGTTATAGTTTGATTCTTTGCTCTTTTTTTTTCTTTTTCTTTTTTTAGGGTTTTGTGTTTGATGCAAGGATTCAGTTAGCGCACACCTGTTCTCTTCGAAAGCTTTATTTAGTGATGTTTGCGTTGGTGTAAAGCATGGAGAGTTCTTGCGAATTAATGGGTTGTGATGGAAATGCTAAAAAAATGTAAAGATCATTAATTATTGGCGTTACAGAAACCACAAATTTGTTGCAGGGGGCTAACTAGAGATGTGGAGTGTTAAAAATGTCATGGTATCACCGTGCTGCGGGTTTTGTGAAATTGTTTCCTTGTTTTTTTCCTTTTGGTAATTTTTTGGAGGAAGATCGTGTGAAATCACTAGTATTAATTGTTTTGTGAGGAAGGTTATGTAAAATTGTGGTGCCTCTTGAATCTTGATGCCATAACCAGCGTATGACTTATAAGTTAAATAAAGCTTCCATTATCTAAAAAAAGATGACTTATAAGTTATAACATGTCGGGATTTTTGACTATTTCATCTTAAGAACAAATTAAAAGCAAGACAAATACTAACAAGTTTACATGGGTGCAAAGATTAATAGGCAAGGGCGCCAAGCTGTGAGGAACTAGATAGATTTCACAGCTCCCCGTTGGGAGGCACACTGCTTGCTTATTATAGCTGCTGCATGTGTACTGTTTGTGTTACTGCGCACATATTTCCTTGAGAAGCTTTCTTTACTACTGTTTGTGTTGGTATAAAGCATGGTGAGTTCTTGAGAATAGAAGGTCTGTGATGGAATGATAATATGCAGAGATCATGGATTATTGACGGCAAAGAAACCACAAATTTGCTACAATGGGGCAGCTAGAGATGTGTAACGCGATGTTTGATTATTTGCACTTTGTCATCTCACCGGGGTGTCACTGTGCTGCAGATCGTATGAAATTATTATATTTTTAGGAAGGTGTGTGTATGTTTGCTTGTTTTGCACGGATAAATGTGTGAAATATGGTGTCATGATGGCATCACCAATGTGTGCCCTATAACATGTTGGCATTGATGTTAAAAGCAACATAGAACTACAAGAGAAGTAACAAGTTGTGCAGTGCAAATTTACATGAGTTTGAACTATATATAAACAGATTTCACAGCTCTCTGTTGGGAGGCACATTGCTTACTTCTTATAAGAGCAGGATCAATAATACCGCCCGTTGCTGGCTATAAAATTCGCCATGTCATTTAGTAGGCTATATAGTATATAGATGTAGCTTGCGTTTTCTTCCTTGGGCAGGCCAAAAGCTGCATGCACAAACTGATTGCTGTCCAATCACCATTTATCCTGAACAGCTAGTACCCAATCACTATGCGTAAGCAAGGGTATGGCCAATTGCAGTAAATTCACCTAGTCTTGGAGGCTGCGTGCAGCCGGCGCTAATATAGTCGCCCGCTTAAGTTCTCTGTCCTTGATTCCCTCCGCCAACTCAGCTTTTTTGCCATGATGGATATATTATAGTCTGCTTAATTCTCCTATTGTACTTGCTCTAAGCTTCTGCATGTGTACTGTTACTCAAACACTTGTTAATCCTCCTTTTTTTTTTGCATGTGTACTGTTACTCAAACACTTGTTAATCCTCTTTTTTTTTTTCAGAACCTCTTCTTTGTGAACCAGTTGCAGGCACAATTACGAGGTGGAAAAGTGACTTTGGCTGCTCAGCAGGAGGGTTTCAGTGACAAGATGAATTCTGGTGCTGAATATGAAGATGGCAGTGAGGAAGAAGAACCATATGAACGTGTGTTTTATGATGATGAAGACGATGGCAATGATGATTCAATATGTGGGGATCCCTGTGATGATTCAGTACCAAAAGAGGAGGTGCACAGGTAAAGTGGCAAAGACACATTTCATGTGGAGCATTTCATCAATCTGGTGCTTAATTCTCGCAGTACTTGCAGGAAGCTTATGCATGAAGCAGAGCCATATGATGATTTGGTGGCTGGTGAGGAGGAATCTGTTGAGAACTCTGCTCTGCAAGCTTTCAAGAAGGAACGAAATGAGCAAGAGCTCAAGCAGGCCCAGAAAATGGGTTACAGCATTAAGCAAAAGGAGATACCAGTGGACAAGGAAATGGGAATGAAACCGTTCAAAAAACGGCTTGTCAAGTTTGCTGATGATGTATCTTGTTACACATACAGTACCGAGAGTTTTGCTGCTGCAAAGTTGGAGAAAAGGAAAGCTCAGTTTGATGACCAGGACAAGCACCTCCATAAGAAACAGGAACACACTCCACCTTCGTTTCCTCAGGATGGTGGCAAGCTGAAAGAAGTGGACAACACTAATCTGTATGTGGGCAACCTACCTGCTTCTGTAGGTTCTCACAAGCTCATCGAGCTATTTCTACCTTTCGGTCAAATTGTCAGATCAAGAGTTGTGGATGATTGTTTCACTGGTTTGAGCCAGGGATATGGCTTTGTGAAGTATTCTGATCCTCGCTGTGCTTCTGAAGCTATTAAGCGCATGAATGGGCGCTTGGTTGAAGGAAGAGCTCTAGAGGTCAGAGTAGCTGGTTTTCCATCATCAGAGGATAATAGCCAGCAGCCTTCAAAGGAAACTGACATGGCTAAATTGTATGTGTGCAACCTTTCCTTGTCCATGAACACAGACAGGCTGATTCATCTTTTTCTGCCTTTTGGGGAAGTAACTAATGCAAAGGTGGCCAAAGATCACACAACAGGCTTAAGTAAAGGATATGGCTTTGTGCAGTACTCTAGTCCTCACCATGCAGCTGAGGCTGTCATCCATTTGAATGGACGTCTTGTCGATGGAAGAAAGATAGAGGTTCGAGTATCTGGCATACCTTCAACACTGCCAAATTCAGCTGTTGAATCACCGAGCACCACCAGAACCGTCAAGGAAATTGACATGTCTAATCTGTATGTCTGTAACATGCCATCGTCAATTGACACCAAGAAGTTGGTTGAGCTTTTCCTTCCATTTGGTAAGATCACCCATGCAAGAGTGGTGGCAGATCCTGACACCTTTTCAGCCAAAGGATATGGTTTCATCAAGTTTACTGATTCTGAATCTGCTACCAAAGCTATTGCAGCAATGAATGGAGCATTGGTTGGAGGAGAAATGATAATTGTCAGAGTTGCAGGCCTTTCCCCATCAGCATCCATCTCAGCTGTACAGACCACTCAAGACATCAACAAGTCTAGACTATACATCACTAATCTTCCACGGTCGATGACTGCCGATAAGATGGTTAATCTTTTCGCGCCCTTTGGTCAGATCACTAAAGTCCTGATGAATCTGGAGTATAGTCTAGTGTGGTATGCAGATGCACCCTCAGCTATCAAAGCTGTCCAACACATGGATGGATACATGGTTGAAGGAAAGAGGTTAGTGGTCAAGAGATCAGAGTTATGTACAACCAACGCTTCACAAGCAGGTGGCAAGCCAATCAAGGAAATCGACATGGCCAATCTCTATGTTGGCAGGGTTCCATCAAGTTTAACTGAAGATCAATTCATCGATCTCTTCCGCCCATTTGGACGAGTTGTTCAAGCTAGAATGTTTCGATTTCAGAGGTATGGCATGGTTAGGTTTGATAATCCTTCATGTGCTGCTGCAGCAATTGATCATTTGGATGGCTACCAGATTGGTGGAAGCATACTGGCTGTGAGAGTCGCTGGGCTTCCAGCAGAATCCAATGCAGCCAAGGGTGCTCTGACATCACAGATGTCTTCTAATGAGCAGGGACAAATCGACATGACTAACCTTTATGTGAGCCATCTCCCGAGCTATGTTAACAACGAAAGACTTATCGACCTCTTCCTACCATGTGGCCAAATCACTCAAGCAAAAGTAGTTGTTGAGAGATACACTGGTGTGAGCAAAGGATTTGGATTTGTCAAGTTTGCTGATGCTTACTCTGCTGCTGTGGCTCTCACTCACATGAATGGTTACCCTCTGGATGGGCATGTGTTGGAGGTTAGGATAGCTGGTGTTCATCCAGATGCTATGAGCAGTTACATGGCGCATTTCTACTCCCACTTCACAATGCATGATCCCGCAAAGGCGGCTGTCGGAATACCTACGTCCTATTGGCCGCACTATTACGATGAATCCGCATACAATACAACAGCTGAGAACCTGGGCCAAGTCACCACTACATCTGCAACCGATGCTTCTGCTGCTCAAACATCTCAGAAGGAAAGGTTGCCTGGATCTAAATCAGTCGATTTGGTTGCTGAGAAAGATTGCTCTTCTGCGTCGAACAAAGTTGCCCATTGTTCTGAGTCACAGCCAACAGCTTGGGCTGGTCCACCTGGCTTTGAGCCTCATGCCATCTCCAAGAAATGTACTGCTGGGTCCAATGCTTCTCAAGCTTGTTCAAAGGATCATTTTGCACAGTCAGGAGGTGGCCACAAAAGGCGTTCAATCGTCTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA014069