BGIOSGA014072

From RiceWiki
Revision as of 03:52, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA014072| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA014072, complete gene.| tag = H0901F0...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA014072

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA014072, complete gene.

LocusTag

H0901F07.20

Ensembl Transcript ID

BGIOSGA014072-TA

Ensembl Protein ID

BGIOSGA014072-PA

Length

2486

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:33991488..33993973

Sequence Coding Region

33993540..33993973,33992817..33992922,33992528..33992634,33992170..33992261,33991979..33992076
,33991488..33991655

Genome Context

<gbrowseImage1> name=IndicaChromosome04:33991488..33993973 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:33991488..33993973 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGGCGGCGACTGGCAGGAGCTTGCCCAGGCGGCGGTAATCGGCCTCCTCTTCGCCTTCCTCGTCGCCAAGCTCATCTCCACGGTCATCGCCTTCAAGGAGGACAACCTCCGAATCACCCGCTCCACGCCGACCTCCCCCTCCGCCGCGGACACCCCCGCCGCCCCGGCCCCACCTCCGGCCTCCCTCGACGGCGGCCATGGGGACACCAGCGACGGCAGCGGCAGCGACAGCGACTGGGAGGGCGTGGAGAGCACGGAGCTCGACGAGGAGTTCAGCGCCGCCTCCGCGTTCGTCGCCGCCTCCGCTGCGTCTGGCACGAGCGTCCCCGAGCAAGCCCAGCTTCAGCTCTATGGGCTCTACAAGATCGCCACCGAGGGGCCCTGCACCGCGCCGCAGCCGTCCGCCCTCAAGCTCAAGGCCCGCGCCAAGTGGAATGCTTGGCATAAATTGGGTGCTATGCCGACAGAAGAAGCTATGCAGAAGTACATCACAGTTGTGGATGAGCTATTCCCTAACTGGAGCATGGGTTCGAGCATGAAAAGGAAAGATGAAGATACCACAGTATCTGCTTCAAGTTCGAAGGGACCAATGGGACCTGTATTTAGCAGTTTAATGTATGAGGAGGAAGATCAGGGAAATGACTCTGAACTTGGCGATATCCATGTTTCAGCAAGGGAAGGAGCAATTGATGACATAGCGAAGCATCTGGCTGCTGGTGTAGAAGTCAACATGAGAGATAGTGAAGGCAGAACTCCACTGCATTGGGCTGTCGACCGTGGCCATCTAAATTCTGTTGAGATTCTTGTCAATGCAAATGCTGACGTGAATGCTCAGGACAATGAAGGACAAACAGCGCTTCACTATGCTGTCCTCTGTGAGCGAGAAGATATTGCTGAGTTGCTTGTCAAGCATCATGCTGATGTTCAAATCAAGGATGAGGATGGGAACACGGTGCGGGAGTTATGCCCTTCAAGCTGGTCTTTTATGAACCTGGCAAACTGA</cdnaseq>

Protein Sequence

<aaseq>MGGDWQELAQAAVIGLLFAFLVAKLISTVIAFKEDNLRITRSTPTSPSAADTPAAPAPPPASLDGGHGDTSDGSGSDSDWEGVESTELDEEFSAASAFVAASAASGTSVPEQAQLQLYGLYKIATEGPCTAPQPSALKLKARAKWNAWHKLGAMPTEEAMQKYITVVDELFPNWSMGSSMKRKDEDTTVSASSSKGPMGPVFSSLMYEEEDQGNDSELGDIHVSAREGAIDDIAKHLAAGVEVNMRDSEGRTPLHWAVDRGHLNSVEILVNANADVNAQDNEGQTALHYAVLCEREDIAELLVKHHADVQIKDEDGNTVRELCPSSWSFMNLAN</aaseq>

Gene Sequence

<dnaseqindica>1..434#1052..1157#1340..1446#1713..1804#1898..1995#2319..2486#ATGGGCGGCGACTGGCAGGAGCTTGCCCAGGCGGCGGTAATCGGCCTCCTCTTCGCCTTCCTCGTCGCCAAGCTCATCTCCACGGTCATCGCCTTCAAGGAGGACAACCTCCGAATCACCCGCTCCACGCCGACCTCCCCCTCCGCCGCGGACACCCCCGCCGCCCCGGCCCCACCTCCGGCCTCCCTCGACGGCGGCCATGGGGACACCAGCGACGGCAGCGGCAGCGACAGCGACTGGGAGGGCGTGGAGAGCACGGAGCTCGACGAGGAGTTCAGCGCCGCCTCCGCGTTCGTCGCCGCCTCCGCTGCGTCTGGCACGAGCGTCCCCGAGCAAGCCCAGCTTCAGCTCTATGGGCTCTACAAGATCGCCACCGAGGGGCCCTGCACCGCGCCGCAGCCGTCCGCCCTCAAGCTCAAGGCCCGCGCCAAGTGGTAGATTCGATCCCCCTGCCTCCCTGATCTTTTTTCTCTTCTGGATTTAGTTCAAGCATCTGTTAGAGTCGGGCTCCGCTTAACCCCCACTGTTTCAGTTCGAGGGTTTAGGGAAATGGATCGAAATTTATCGTTATCTAAGTTTAGGTTCAGTTACTGCTAGAATTGCTGATCACGAAATCTGGTGGTAGGTTTTTTGTGCTTTGCACTGACCGGAGGAGACTCATAAATTCCTGTGTGTTAATCTTGTAGCTATGATTCTTGTTAGAAACTTAACTCATTGTTATTGCCTCTAGGTTTACAGGTTTGGTTCATTGGAAGTGAAATCTCCTGGTAGCTCGATGATCTCACAAATAGTAGCATTCCTCAGTCAGATGCTGCAATTCAACTTACTTTTGCATTATGTTGTTTGATTTATTGTTTCCTGACTTCCTTTGGTGGTTTTGAATTTACCCTTTTGAATTTGGCACTGGAGTCTGAATTAAGATATCTACTGTTTGCAGCTAACTTTTATTACCATCATACTGTTTGTCTTTTGCGCTGTCTATCTCTGTCAATTTTAAAGACTTAATCTAGTTTACAAGTATCCTAATTTTCATATGGTGTCAATATCCAAGGAATGCTTGGCATAAATTGGGTGCTATGCCGACAGAAGAAGCTATGCAGAAGTACATCACAGTTGTGGATGAGCTATTCCCTAACTGGAGCATGGGTTCGAGCATGGTAATTCTCTTATGCCCTCTTGTACTGTTCGTATTTTGCTACTTGGGATCCCATCACTGTATTGGCTTATTTTATAGTCTGCTTTACATGATTCCTGAAAAAAAAAACACCGCTCAATTTGTGCTAGTTGGGATCCCATCACTATATTGGCTTATTTGATAATCTGATTTACATGATTTCAGAAAAGGAAAGATGAAGATACCACAGTATCTGCTTCAAGTTCGAAGGGACCAATGGGACCTGTATTTAGCAGTTTAATGTATGAGGAGGAAGATCAGGGAAATGACTCGTAAGTTTTCGACACGAAGTATATCCTGTACCTTTGGTCTTATTATTATGTGTTAAAACGGCCTTGATTCAAGTTCAGTTAGGTTTGTATTTGGGCATCGTCTCTTATGGCTGATAAATCATAGCAAATAACAATGACATGATTAATTATTTCATGAAGTATGCAACTAATTATCTCCATGTTGGTGCTATTAAGCATTATTTATTCAGTCATCTAGTTACATGACAGTGTTTCCATGATTGCAACAAACTTATCTGTAACTGCAGTGAACTTGGCGATATCCATGTTTCAGCAAGGGAAGGAGCAATTGATGACATAGCGAAGCATCTGGCTGCTGGTGTAGAAGTCAACATGAGAGGTTTGTGTTCTGAACTGTTCACCATTATGTTCTCTTTGTAGCTTAGGCTTAGCATAGCTCATCTAAGCATAGTTTCATTTATGATGGTTTCAGATAGTGAAGGCAGAACTCCACTGCATTGGGCTGTCGACCGTGGCCATCTAAATTCTGTTGAGATTCTTGTCAATGCAAATGCTGACGTGAATGCTCAGGTACTTGACTCTACCTTTAATGCTTCACTCAGTGCATTCTAGTAGAATTCACGCGCTGATAAATTTGGTGAGTATGTAATTGGAGCAAGAAGCTGGTAATATATCTTGGCGTGGCATTTTCATTGGGATTACATTATGTACTACATTGAATAAAAAGTTGCTATTCATTGTGGCCATATAATAGTGTCAATAAATATGAGATTGCCACGGCTAGGTACTACTAGTGGATATATATTGGTTTGATAGGCACTGCTTCCCTGAAAAAGTCTAAACATTATAATGAGATCAATGAGCAACACTGTCCATGTCCCTTTTATATTCAGGACAATGAAGGACAAACAGCGCTTCACTATGCTGTCCTCTGTGAGCGAGAAGATATTGCTGAGTTGCTTGTCAAGCATCATGCTGATGTTCAAATCAAGGATGAGGATGGGAACACGGTGCGGGAGTTATGCCCTTCAAGCTGGTCTTTTATGAACCTGGCAAACTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA014072