BGIOSGA014075

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Revision as of 03:52, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA014075| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA014075, complete gene.| tag = H0901F0...")
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Gene Name

BGIOSGA014075

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA014075, complete gene.

LocusTag

H0901F07.15

Ensembl Transcript ID

BGIOSGA014075-TA

Ensembl Protein ID

BGIOSGA014075-PA

Length

3636

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:33972676..33976311

Sequence Coding Region

33976190..33976311,33975419..33975777,33975153..33975298,33974644..33974827,33974458..33974531
,33974271..33974384,33973726..33974082,33973372..33973632,33972975..33973202
,33972676..33972867

Genome Context

<gbrowseImage1> name=IndicaChromosome04:33972676..33976311 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:33972676..33976311 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGGGGGAAGGGAGGAGCCACGAGGCGGGGTCGCTCGACGTCGGCGCCGGATGCGATTTGGGACTTCTCTTCGTGCGGCGGCGTGAGGAACGAACGACGGAGGAGAGAGCCCTACTAGGGCTTACCTATGAACTAGACTACAAAGGGAACATTTGTGGCAGTAGGCATGGTGACCCGGATTTGCATGAGCTTGATGTTAGATATTGGATGAACCCAAACCAGGTGTACCAAAGTGGGGTCAAGGACAACAAGATTAACCTTGCTGATGCCAAAGCCATCTGCCTGATGGAGTGCCCCATTCCAGCAGCAGACGGATTAAACTTTGTTTGTGATTATCCAGAAGGGGACATTCGCCTCTCTATCGATGATTGGATCAACAGGGACTATGATTATTTTGAGTTTCTCACACCAGATATGAGAAATAGTTCTCTTCAGCTGCAGGGTCCATGCTACCCTGTCATATTTCCAAGTGTGAATGTCTACTGGAGCTGCCAATTTATTGCGCGAGCATCCAATGTCTCTTTGAAGCATTGGCAGCAGATGGGTGGTATCAACATCGACGAAAATATTCTCATAGATAAAACAATACACAAGGCCATCAATTCTAAATCTTCAGTCTTGAAGAGATACGTTGCTGACATTGGGAAGTCATGGCCTGTGTTAATTGTTTGCGGTGGACTGCTCCCTCTTTTCTTGTCAGTTATCTGGTTGCTTCTGATTCGTTATTTTGTTGCTGCCATGCCATGGATAACTGTAGTGCTCTTCAATGCTCTAGTAATCTCCGTTACTATGTTTTTTTATATTAAAGCTGGCTGGTTAGGCAATGATCCCTTGACAGTTGTAATTGGTGAAAGTGATCCATATGTGCATATAACTGGACGGGAAATAAGCCACCTTCATGCTGCTACGGTGGTGATGACAGTTGTAATGATCATTGCATTTCTGTCCTCCATAGCTATTATCCGGCGTATACTGATAGCAACACCTGTCCTGAAGGTTGCTGCAAAGGTCATTGGTGAAGTTCAGGCACTAATTATTTTCCCAGTTGTGCCATACTTTATCCTCGCTATCTTTTATATGTTCTGGTTTTCTGCCACACTCCATCTCTTCAGCTCTGGTCAAGTTCTCCGAAATGACTGCAATACAGATTGTTGCTCATATGATCTGAAGTTGGGCAAAGTAAACTGTGACAACTGTTGTGGGTACAGCATCCATTACACCCCTCATATTGGTATTGCCATTCTTTTCCACTTATTTGGCTGTTACTGGGCAACCCAATTCTTTATTGCGTGCTCTTCAACCGTGATTGCTGGATCAGTTGCTTCATACTATTGGGCACGTGGTGAAATATCCCATGACATACCATTTGTTACAGTTGTTTCTTCATTGAAGCGGTTGTTGCGTTACAGCCTTGGTTCAGTTGCTATAGGTTCACTTGTTGTATCTGCTGTTGAGTGGGTGCGGTTTATACTAGAATGCCTCAGACGCAAGTTGAAGCTATTTGATTCCGCTCGTGAAAGCTGCTTTGGTAAGATGACATCATCCTCTTCTCAATGCTGCCTGGGCTGCATAGACTGGACCCTCAAGTCTGTGAATCGAAATGCCTATATAATGATCGCCATTACTGGGAAAGGGTTCTTCAAAGCTTCTGTTCTCGCAACTGGTTTGATCATGAATAACATACTGCGCATTGGAAAAGTTAACGTCATTGGAGACGTCATCCTCTTTCTGGGGAAGCTCTGTGTGAGCTTGTTCTGTGCGCTCTTTGCCTTCCTTATGTTAGACACTCACAAGTACAAGTCTGCACATAACAAGATATCATCTCCTCTTGTTCCTGTAGTGGTATCATGGGCACTTGGTTTTATAGTCGCCAAGCTTTTCTTCCAAGTCGTCGAGATGTCGATCGACACCATAATCCTCTCCTTCTGCCAAGATTCAGAAGAGCACCAAGGGAACGCGCAGTACGCTCCCCCTCTCCTAGTGGAGACACTGGATGAACAGAGTGAACTCCATAGACTAACTCAAGGGCCTTGA</cdnaseq>

Protein Sequence

<aaseq>MAGEGRSHEAGSLDVGAGCDLGLLFVRRREERTTEERALLGLTYELDYKGNICGSRHGDPDLHELDVRYWMNPNQVYQSGVKDNKINLADAKAICLMECPIPAADGLNFVCDYPEGDIRLSIDDWINRDYDYFEFLTPDMRNSSLQLQGPCYPVIFPSVNVYWSCQFIARASNVSLKHWQQMGGINIDENILIDKTIHKAINSKSSVLKRYVADIGKSWPVLIVCGGLLPLFLSVIWLLLIRYFVAAMPWITVVLFNALVISVTMFFYIKAGWLGNDPLTVVIGESDPYVHITGREISHLHAATVVMTVVMIIAFLSSIAIIRRILIATPVLKVAAKVIGEVQALIIFPVVPYFILAIFYMFWFSATLHLFSSGQVLRNDCNTDCCSYDLKLGKVNCDNCCGYSIHYTPHIGIAILFHLFGCYWATQFFIACSSTVIAGSVASYYWARGEISHDIPFVTVVSSLKRLLRYSLGSVAIGSLVVSAVEWVRFILECLRRKLKLFDSARESCFGKMTSSSSQCCLGCIDWTLKSVNRNAYIMIAITGKGFFKASVLATGLIMNNILRIGKVNVIGDVILFLGKLCVSLFCALFAFLMLDTHKYKSAHNKISSPLVPVVVSWALGFIVAKLFFQVVEMSIDTIILSFCQDSEEHQGNAQYAPPLLVETLDEQSELHRLTQGP</aaseq>

Gene Sequence

<dnaseqindica>1..122#535..893#1014..1159#1485..1668#1781..1854#1928..2041#2230..2586#2680..2940#3110..3337#3445..3636#ATGGCGGGGGAAGGGAGGAGCCACGAGGCGGGGTCGCTCGACGTCGGCGCCGGATGCGATTTGGGACTTCTCTTCGTGCGGCGGCGTGAGGAACGAACGACGGAGGAGAGAGCCCTACTAGGGTTAGTGAATGTAAAAGACGATTGTACCCCTCCGCAAATATTTTTTCATAGACAATAATACCCTCCACGATTCTACTACCGTTAAGTGAGGTGGTAGTAAAAATAAATCTGAAACCTTGGATTAAATGAGATCAACGATCCAGATTACTTTCTACTCCAAGTAGAAAGCACCGGAGTGAGACTGTGTGCTATACAAGATTTGTGCTCCCTAAAAGCAATTCACATTACGGTTATATATTATAGAAACCAAAACTCACTACTGAGTGCTGACCAAAGGAAATTTGTTTAGGGATAAAACTCAGTGCTGTGCGACTTTTACATGGCTATCATTTTACTATTATTCAGACGCTATGATAAGTAACCAAACTACTATTTAGTAATACTGATGTCTTATCTTGTTTTGATGACGCAGGCTTACCTATGAACTAGACTACAAAGGGAACATTTGTGGCAGTAGGCATGGTGACCCGGATTTGCATGAGCTTGATGTTAGATATTGGATGAACCCAAACCAGGTGTACCAAAGTGGGGTCAAGGACAACAAGATTAACCTTGCTGATGCCAAAGCCATCTGCCTGATGGAGTGCCCCATTCCAGCAGCAGACGGATTAAACTTTGTTTGTGATTATCCAGAAGGGGACATTCGCCTCTCTATCGATGATTGGATCAACAGGGACTATGATTATTTTGAGTTTCTCACACCAGATATGAGAAATAGTTCTCTTCAGCTGCAGGGTCCATGCTACCCTGTCATATTTCCAAGTGTGAATGGTAATCTTTGCTCAGTCTGTACTACTTCTATGTGAGCATGGATTAAATTAAGGGCTTTACTTCTTCATGCAATAAGTTAAAACAATGAGATAGCTGATCCAAAATCTTTGTTCCCTTCAGTCTACTGGAGCTGCCAATTTATTGCGCGAGCATCCAATGTCTCTTTGAAGCATTGGCAGCAGATGGGTGGTATCAACATCGACGAAAATATTCTCATAGATAAAACAATACACAAGGCCATCAATTCTAAATCTTCAGTCTTGAAGGTTTGTAAACTTCCTGGCACTGTTTTATTACCTGCACATTCCTTTTTGCTGTCGCAAACATTTCTGATTTACGTTGGAAGTGAAAAGTGGCCCAGCTATTCCTATAGCTAACACTGACCGTCCATTACACCACAGCAATACTTTTTATCCTTACAAAAGAATTTTGTTGCACCGTTGCTCTGAAAGAAGCATATTACTTTCTTGCAACTAAAATGGATATGCATTTTGAATTATTCTGAGAAATTCCTGATGCAATATCATTCATATAGCACTGGAGTCCCATTTTGTCTTTGAAGATATTAATTACCATTTCCTTTGTCTGCAGAGATACGTTGCTGACATTGGGAAGTCATGGCCTGTGTTAATTGTTTGCGGTGGACTGCTCCCTCTTTTCTTGTCAGTTATCTGGTTGCTTCTGATTCGTTATTTTGTTGCTGCCATGCCATGGATAACTGTAGTGCTCTTCAATGCTCTAGTAATCTCCGTTACTATGTTTTTTTATATTAAAGGTATGGTTCAATTTTTCAAATCATAATTCCAAAATATGGCAAGGGAAATTCCATTGTATGCCATTTCACATGTTGCACACATACGATTCTAATTGGCTACATTTTAATTCAGCTGGCTGGTTAGGCAATGATCCCTTGACAGTTGTAATTGGTGAAAGTGATCCATATGTGCATATAACTGGACGGGTAAGTATATCAAATTTTGTCAACTTTTTTACAATATCCAGCCCTGTTGTCTGATTATTCATTCTTTTACTAGGAAATAAGCCACCTTCATGCTGCTACGGTGGTGATGACAGTTGTAATGATCATTGCATTTCTGTCCTCCATAGCTATTATCCGGCGTATACTGATAGCAACACCTGTCCTGAAGGTATGCGAATCATTGGATACAAGCTTGATTAGCTACACTATATAAGCACCTCGCAAAAAAAAAACACTATATAAGCAGAAGCTTGGTTTTGAAGACATGCAGCATCAATGCCATTCCTCCTCTTTGATGGCAAGAGTATAGTTAATATATAGTTCCTAAGCACTAACCATGATAATTGTTATCTTCAGGTTGCTGCAAAGGTCATTGGTGAAGTTCAGGCACTAATTATTTTCCCAGTTGTGCCATACTTTATCCTCGCTATCTTTTATATGTTCTGGTTTTCTGCCACACTCCATCTCTTCAGCTCTGGTCAAGTTCTCCGAAATGACTGCAATACAGATTGTTGCTCATATGATCTGAAGTTGGGCAAAGTAAACTGTGACAACTGTTGTGGGTACAGCATCCATTACACCCCTCATATTGGTATTGCCATTCTTTTCCACTTATTTGGCTGTTACTGGGCAACCCAATTCTTTATTGCGTGCTCTTCAACCGTGATTGCTGGATCAGTTGCTTCATACTATTGGGCACGTGGTGAAATATCCGTAAGTGAATTGAGGCACTTAAAAAATTTACTCTATATTTAGCAGTTAGTTTACTTCTCCTTTCCACTGACTATTTGAGCTATTCCTATGCAGCATGACATACCATTTGTTACAGTTGTTTCTTCATTGAAGCGGTTGTTGCGTTACAGCCTTGGTTCAGTTGCTATAGGTTCACTTGTTGTATCTGCTGTTGAGTGGGTGCGGTTTATACTAGAATGCCTCAGACGCAAGTTGAAGCTATTTGATTCCGCTCGTGAAAGCTGCTTTGGTAAGATGACATCATCCTCTTCTCAATGCTGCCTGGGCTGCATAGACTGGACCCTCAAGTCTGTGAATCGAAATGCCTATATAATGGTAAGCATACAAAAATTCTTGTTCATGGAGCAATTGCTCCATGCCTGAAACCAATTGTCTCCCCTGCTTTGTTTGGGTGTGGATGCAAAATCATCTGGAAAACATACACTATCCAAGTTGATGCTTGTATTGAATTCATTAGGCTTATACCCTTCTTTCGGTGTTGCAGATCGCCATTACTGGGAAAGGGTTCTTCAAAGCTTCTGTTCTCGCAACTGGTTTGATCATGAATAACATACTGCGCATTGGAAAAGTTAACGTCATTGGAGACGTCATCCTCTTTCTGGGGAAGCTCTGTGTGAGCTTGTTCTGTGCGCTCTTTGCCTTCCTTATGTTAGACACTCACAAGTACAAGTCTGCACATAACAAGATATCATCTCCTCTTGTTCCTGTAGTGGTAAGCATTTCATCGTTCTGTCATCGCGGCTCGCAAACTGACAAATGCCATTTCCATTGCTAAGACCTAAAGGTGTCTGTATATATTCTGATGCTGCTACACTGCAGGTATCATGGGCACTTGGTTTTATAGTCGCCAAGCTTTTCTTCCAAGTCGTCGAGATGTCGATCGACACCATAATCCTCTCCTTCTGCCAAGATTCAGAAGAGCACCAAGGGAACGCGCAGTACGCTCCCCCTCTCCTAGTGGAGACACTGGATGAACAGAGTGAACTCCATAGACTAACTCAAGGGCCTTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA014075

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