BGIOSGA014118

From RiceWiki
Revision as of 03:53, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA014118| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA014118, complete gene.| tag = OsI_178...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA014118

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA014118, complete gene.

LocusTag

OsI_17875

Ensembl Transcript ID

BGIOSGA014118-TA

Ensembl Protein ID

BGIOSGA014118-PA

Length

3039

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:33399257..33402295

Sequence Coding Region

33401547..33402295,33399257..33400868

Genome Context

<gbrowseImage1> name=IndicaChromosome04:33399257..33402295 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:33399257..33402295 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGAGAGGTTACTACTGCTTCTTCCATTTCTTGGTGGTGTCCGTGCTGCTCCACGTCCATGGCGGCCGCTCCGAGAGCCAGACGTGCGACCCCACCGACATGGCGGCGCTCCTGGCCTTCTCCGATGGCCTGGACACGAAGGCCGCCGGGATGGTCGGGTGGGGCCCCGGCGACGCCGCCTGCTGCTCGTGGACGGGCGTGTCCTGCGATCTCGGGAGGGTGGTGGCGCTGGATCTCTCCAACCGGAGCCTCTCCCGGAACTCGCTTCGCGGCGGCGAGGCGGTGGCGCGGCTCGGCCGGCTGCCGAGCCTGCGGCGCCTCGACCTCAGCGCGAACGGCCTCGCCGGCGCGTTCCCGGCGGGCGGCTTCCCGGCGATCGAGGTGGTGAACGTCTCCTCCAACGGGTTCACCGGGCCGCACCCCGCGTTCCCCGGCGCGCCGAACCTGACGGTTCTTGATATCACCGGCAACGCCTTCTCCGGCGGCATCAACGTCACCGCGCTCTGCGCTTCGCCGGTCAAGGTCCTGCGGTTCTCGGCGAATGCCTTCTCTGGTGATGTGCCGGCCGGCTTTGGTCAGTGCAAGCTGCTCAACGACCTCTTCCTTGATGGCAATGGCCTTACTGGGAGCCTCCCCAAAGATCTGTACATGATGCCAGCGCTGAGAAAACTAAGTTTGCAGGAGAATAAGCTCTCCGGCAGCCTCAACGACGACCTCGGTAACCTCACTGAGATTACGCAGATTGACTTTGGGGAGCTTCCTGCAACCTTTACACAGATGAAGAGTTTAATTTCAAGTAATGGCTCAAGTGGGCAGGCGTCAACAGGAGACCTCCCATTATTCGTCAAGAAGAATTCGACTTCGACTGGTAAAGGCTTGCAGTACAACCAACTCAGTAGCTTCCCGTCATCACTGATCCTCTCAAATAACAAGCTTGTTGGGCCAATATTGCCAGCCTTTGGCCGTCTAGTGAAGCTTCATGTGCTGGACTTGGGCTTTAACAATTTTTCTGGGCCAATTCCTGATGAGTTATCAAATATGTCGAGCTTGGAAATATTGGATTTAGCCCACAATGATCTCAGTGGGAGCATACCATCATCTCTAACGAAGCTGAACTTTCTGTCCAAGTTTGATGTTTCGTACAACAATTTGTCTGGAGATATCCCGGCAGGAGGCCAATTCTCCACGTTCACTAGTGAGGATTTTGCAGGCAATCACGCACTACACTTTCCTCGGAATTCCTCCAGCACAAAGAATTCTCCTGATACGGAAGCACCACATCGTAAGAAGAACAAAGCAACCCTTGTGGCCCTTGGACTTGGTACTGCAGTGGGGGTTATTTTTGTCTTGTGTATTGCTTCTGTGGTTATATCAAGGATTATTCATTCAAGAATGCAGGAGCATAATCCAAAGGCAGTAGCGAATGCTGATGACTGCTCAGAGTCTCTGAACTCAAGCTTGGTGCTGCTTTTCCAGAACAACAAGGATCTTGGTATTGAAGATATATTGAAGTCAACCAACAACTTTGATCAAGCCTATATAGTTGGTTGTGGTGGTTTTGGACTTGTTTACAAGTCAACACTACCAGATGGGAGGAGAGTTGCAATCAAGCGGCTTTCAGGCGATTACTCTCAGATTGAGCGGGAGTTTCAAGCTGAAGTGGAAACACTATCACGTGCCCAGCATGACAACCTTGTTCTGCTAGAAGGCTATTGCAAGATAGGCAATGACAGACTACTGATCTATGCATACATGGAGAATGGCAGCTTGGATTACTGGCTTCATGAGAGGGCTGATGGTGGTGCCCTGCTGGATTGGCAGAAGAGGCTACAGATTGCACAGGGATCGGCAAGGGGGCTGGCATACTTGCACCTGTCGTGTGAGCCCCATATATTGCACCGAGATATCAAGTCAAGCAATATCCTCTTGGATGAGAACTTTGAAGCTCATTTGGCTGATTTCGGGTTGGCAAGGCTCATATGCGCATACGAGACGCATGTCACAACAGATGTAGTGGGAACCTTGGGCTACATTCCACCTGAATATGGGCAGTCACCTGTGGCTACTTACAAGGGTGATGTGTACAGCTTTGGAATTGTTCTTCTGGAGCTACTCACTGGGCGGCGGCCTGTGGACATGTGCAGGCCAAAAGGGAGCAGAGATGTAGTGTCCTGGGTGCTTCAGATGAAGAAGGAATACAGGGAAACTGAAGTATTTGATCCAACCATATATGACAAGGAGAATGAAAGCCAGTTGATCAGAATCCTGGAGATAGCACTGCTTTGTGTGACTGCTGCTCCTAAGTCAAGACCAACATCGCAGCAGCTAGTCGAATGGCTTGACCATATCGCTGAAGGTTAA</cdnaseq>

Protein Sequence

<aaseq>MRGYYCFFHFLVVSVLLHVHGGRSESQTCDPTDMAALLAFSDGLDTKAAGMVGWGPGDAACCSWTGVSCDLGRVVALDLSNRSLSRNSLRGGEAVARLGRLPSLRRLDLSANGLAGAFPAGGFPAIEVVNVSSNGFTGPHPAFPGAPNLTVLDITGNAFSGGINVTALCASPVKVLRFSANAFSGDVPAGFGQCKLLNDLFLDGNGLTGSLPKDLYMMPALRKLSLQENKLSGSLNDDLGNLTEITQIDFGELPATFTQMKSLISSNGSSGQASTGDLPLFVKKNSTSTGKGLQYNQLSSFPSSLILSNNKLVGPILPAFGRLVKLHVLDLGFNNFSGPIPDELSNMSSLEILDLAHNDLSGSIPSSLTKLNFLSKFDVSYNNLSGDIPAGGQFSTFTSEDFAGNHALHFPRNSSSTKNSPDTEAPHRKKNKATLVALGLGTAVGVIFVLCIASVVISRIIHSRMQEHNPKAVANADDCSESLNSSLVLLFQNNKDLGIEDILKSTNNFDQAYIVGCGGFGLVYKSTLPDGRRVAIKRLSGDYSQIEREFQAEVETLSRAQHDNLVLLEGYCKIGNDRLLIYAYMENGSLDYWLHERADGGALLDWQKRLQIAQGSARGLAYLHLSCEPHILHRDIKSSNILLDENFEAHLADFGLARLICAYETHVTTDVVGTLGYIPPEYGQSPVATYKGDVYSFGIVLLELLTGRRPVDMCRPKGSRDVVSWVLQMKKEYRETEVFDPTIYDKENESQLIRILEIALLCVTAAPKSRPTSQQLVEWLDHIAEG</aaseq>

Gene Sequence

<dnaseqindica>1..749#1428..3039#ATGAGAGGTTACTACTGCTTCTTCCATTTCTTGGTGGTGTCCGTGCTGCTCCACGTCCATGGCGGCCGCTCCGAGAGCCAGACGTGCGACCCCACCGACATGGCGGCGCTCCTGGCCTTCTCCGATGGCCTGGACACGAAGGCCGCCGGGATGGTCGGGTGGGGCCCCGGCGACGCCGCCTGCTGCTCGTGGACGGGCGTGTCCTGCGATCTCGGGAGGGTGGTGGCGCTGGATCTCTCCAACCGGAGCCTCTCCCGGAACTCGCTTCGCGGCGGCGAGGCGGTGGCGCGGCTCGGCCGGCTGCCGAGCCTGCGGCGCCTCGACCTCAGCGCGAACGGCCTCGCCGGCGCGTTCCCGGCGGGCGGCTTCCCGGCGATCGAGGTGGTGAACGTCTCCTCCAACGGGTTCACCGGGCCGCACCCCGCGTTCCCCGGCGCGCCGAACCTGACGGTTCTTGATATCACCGGCAACGCCTTCTCCGGCGGCATCAACGTCACCGCGCTCTGCGCTTCGCCGGTCAAGGTCCTGCGGTTCTCGGCGAATGCCTTCTCTGGTGATGTGCCGGCCGGCTTTGGTCAGTGCAAGCTGCTCAACGACCTCTTCCTTGATGGCAATGGCCTTACTGGGAGCCTCCCCAAAGATCTGTACATGATGCCAGCGCTGAGAAAACTAAGTTTGCAGGAGAATAAGCTCTCCGGCAGCCTCAACGACGACCTCGGTAACCTCACTGAGATTACGCAGATTGACTTGTCATATAACATGTTCAATGGCAATATCCCTGATGTGTTTGGGAAATTGAGGAGCTTGGAGTCCTTAAACTTGGCTTCCAACCAATTGAATGGCACGTTGCCTCTATCCCTGTCGAGCTGCCCGATGCTTAGAGTGGTCAGCCTGAGGAACAATTCGCTGTCCGGTGAGATTACCATTGACTGCAGATTGCTCACGAGGCTGAACAACTTTGATGCTGGGACCAACAAGCTGCGTGGTGCTATACCGCCTCGCCTTGCCTCGTGCACTGAGTTGAGGACGCTGAACCTTGCAAGGAACAAGCTTCAGGGGGAGCTACCGGAGAGCTTCAAGAATTTGACATCACTGTCATACCTTTCTCTTACGGGGAATGGTTTTACCAACTTGTCATCAGCATTGCAAGTCTTGCAGCACCTGCCCAACTTAACTAGCTTGGTGCTCACCAATAACTTCCGTGGTGGTGAAACCATGCCAATGGACGGCATCGAAGGGTTCAAGAGAATGCAGGTTCTTGTCCTGGCGAACTGTGCACTCTTGGGCACGGTTCCACCTTGGCTGCAGAGCTTGAAGAGCCTCAGTGTGCTGGATATTTCATGGAACAATTTGCATGGGGAGATCCCGCCATGGTTAGGCAACCTCGACAGTCTTTTCTACATCGATCTGTCCAACAACTCATTCAGTGGGGAGCTTCCTGCAACCTTTACACAGATGAAGAGTTTAATTTCAAGTAATGGCTCAAGTGGGCAGGCGTCAACAGGAGACCTCCCATTATTCGTCAAGAAGAATTCGACTTCGACTGGTAAAGGCTTGCAGTACAACCAACTCAGTAGCTTCCCGTCATCACTGATCCTCTCAAATAACAAGCTTGTTGGGCCAATATTGCCAGCCTTTGGCCGTCTAGTGAAGCTTCATGTGCTGGACTTGGGCTTTAACAATTTTTCTGGGCCAATTCCTGATGAGTTATCAAATATGTCGAGCTTGGAAATATTGGATTTAGCCCACAATGATCTCAGTGGGAGCATACCATCATCTCTAACGAAGCTGAACTTTCTGTCCAAGTTTGATGTTTCGTACAACAATTTGTCTGGAGATATCCCGGCAGGAGGCCAATTCTCCACGTTCACTAGTGAGGATTTTGCAGGCAATCACGCACTACACTTTCCTCGGAATTCCTCCAGCACAAAGAATTCTCCTGATACGGAAGCACCACATCGTAAGAAGAACAAAGCAACCCTTGTGGCCCTTGGACTTGGTACTGCAGTGGGGGTTATTTTTGTCTTGTGTATTGCTTCTGTGGTTATATCAAGGATTATTCATTCAAGAATGCAGGAGCATAATCCAAAGGCAGTAGCGAATGCTGATGACTGCTCAGAGTCTCTGAACTCAAGCTTGGTGCTGCTTTTCCAGAACAACAAGGATCTTGGTATTGAAGATATATTGAAGTCAACCAACAACTTTGATCAAGCCTATATAGTTGGTTGTGGTGGTTTTGGACTTGTTTACAAGTCAACACTACCAGATGGGAGGAGAGTTGCAATCAAGCGGCTTTCAGGCGATTACTCTCAGATTGAGCGGGAGTTTCAAGCTGAAGTGGAAACACTATCACGTGCCCAGCATGACAACCTTGTTCTGCTAGAAGGCTATTGCAAGATAGGCAATGACAGACTACTGATCTATGCATACATGGAGAATGGCAGCTTGGATTACTGGCTTCATGAGAGGGCTGATGGTGGTGCCCTGCTGGATTGGCAGAAGAGGCTACAGATTGCACAGGGATCGGCAAGGGGGCTGGCATACTTGCACCTGTCGTGTGAGCCCCATATATTGCACCGAGATATCAAGTCAAGCAATATCCTCTTGGATGAGAACTTTGAAGCTCATTTGGCTGATTTCGGGTTGGCAAGGCTCATATGCGCATACGAGACGCATGTCACAACAGATGTAGTGGGAACCTTGGGCTACATTCCACCTGAATATGGGCAGTCACCTGTGGCTACTTACAAGGGTGATGTGTACAGCTTTGGAATTGTTCTTCTGGAGCTACTCACTGGGCGGCGGCCTGTGGACATGTGCAGGCCAAAAGGGAGCAGAGATGTAGTGTCCTGGGTGCTTCAGATGAAGAAGGAATACAGGGAAACTGAAGTATTTGATCCAACCATATATGACAAGGAGAATGAAAGCCAGTTGATCAGAATCCTGGAGATAGCACTGCTTTGTGTGACTGCTGCTCCTAAGTCAAGACCAACATCGCAGCAGCTAGTCGAATGGCTTGACCATATCGCTGAAGGTTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA014118