BGIOSGA014122

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Revision as of 03:53, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA014122| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA014122, complete gene.| tag = OS04G06...")
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Gene Name

BGIOSGA014122

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA014122, complete gene.

LocusTag

OS04G0671300

Ensembl Transcript ID

BGIOSGA014122-TA

Ensembl Protein ID

BGIOSGA014122-PA

Length

3418

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:33354882..33358299

Sequence Coding Region

33358266..33358299,33356985..33357100,33356763..33356851,33356566..33356679,33356394..33356481
,33356225..33356310,33356031..33356133,33355841..33355938,33355301..33355730
,33354882..33355202

Genome Context

<gbrowseImage1> name=IndicaChromosome04:33354882..33358299 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:33354882..33358299 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGACCAGCCTTCTAATGGCTTCGCCGCCGGAGGTCTTTTTCTTCGTCACATTGATGGGCAAAATGCCTCTCCCCCTTCTGTCATTGTGATTGGTGGAGGGATTTCAGGCATTGCAGCTGCTCGTGCGCTGTCTAATGCTTCGTTTAAGGTCACACTATTAGAGTCACGGGACCGACTTGGTGGCCGTGTGCATACTGACTATTCTTTTGGCTGCCCAATTGACATGGGAGCATCTTGGTTGCATGGTGTATGCAATGAGAATTCATTGGCACCACTGATTAGGTTGCTTGGCCTTAGATTATATCGCACCAGTGGTGATAACTCTGTGCTATATGACCATGATCTGGAGAGCTATGCTCTCTTTGATAAGGATGGTCGTCAAGTTCCCCAGGAGATAGTGACAAAAGTCGGGGAAACATTTGAGAAAATTCTTAAGGAGACGGTGAAAGTAAGAGCTGAACATGAAGATGACATGCCTCTTATTCAAGCCATCTCAATTGTGCTTGACAGGAATCCACACCTAAAGCTTGATGGTTTGCAATATGAAGTACTGCAGTGGTGCATATGTAGGCTGGAGGCATGGTTTGCCACAGATGTGGATAATATATCTCTGAAAAATTGGGATCAGGAACATGTTCTTACTGGTGGCCATGGGCTTATGGTGCATGGTTATGATCCTGTTATCAAAGCTCTCGCGCAAGATCTTGATATCCACCTGAACCACAGGGTTACCAAAATCATCCAGAGGTACAACAAAACTATAGTATGTGTTGAAGATGGGACAAGCTTTGTTGCAGATGCTGCTATAATAACTGTCCCTCTTGGTGTACTTAAAGCAAATATCATCAAGTTTGAACCTGAGCTCCCAGATTGGAAGCTTTCATCAATATCTGATCTTGGTATTGGCATTGAGAACAAAATAGCCCTCCGCTTCAATAGTGTATTTTGGCCAAATGTAGAAGTGCTAGGCAGGGTTGCCCCAACATCAAATGCCTGCGGTTACTTTCTTAACCTTCACAAAGCCACAGGGCATCCGGTTCTTGTATGCATGGTAGCAGGAAGATTCGCATATGAATTCGAGAAGCTATCCGATGAAGAATCCGTAAACTTTGTCATGTCTCAGCTCAAGAAAATGCTACCAGGAGCTACTGAACCGGTCCAGTATTTGGTTTCAAGGTGGGGAACCGACCCGAATTCGCTTGGTTCTTATTCCTGCGACCTTGTTGGGAAGCCAGCTGACTTGTATGAAAGATTCTGTGCTCCGGTGGGCAACCTGTTTTTCGCTGGGGAGGCCGCCTGCATCGATCACTCTGGGTCCGTGCATGGAGCTTATTCTTCAGGCATTGTTGCTGCAGAGGATTGCCGAAGGCATCTGTCGACGCAGCTAGGCATCTCCGACCTTTTCCAGGTTGGGAAGATTATCATGAGGGAGGAGATGACTGAAGTCATGGTCCCCTTCCAGATATCCAGGCTGTGA</cdnaseq>

Protein Sequence

<aaseq>MDQPSNGFAAGGLFLRHIDGQNASPPSVIVIGGGISGIAAARALSNASFKVTLLESRDRLGGRVHTDYSFGCPIDMGASWLHGVCNENSLAPLIRLLGLRLYRTSGDNSVLYDHDLESYALFDKDGRQVPQEIVTKVGETFEKILKETVKVRAEHEDDMPLIQAISIVLDRNPHLKLDGLQYEVLQWCICRLEAWFATDVDNISLKNWDQEHVLTGGHGLMVHGYDPVIKALAQDLDIHLNHRVTKIIQRYNKTIVCVEDGTSFVADAAIITVPLGVLKANIIKFEPELPDWKLSSISDLGIGIENKIALRFNSVFWPNVEVLGRVAPTSNACGYFLNLHKATGHPVLVCMVAGRFAYEFEKLSDEESVNFVMSQLKKMLPGATEPVQYLVSRWGTDPNSLGSYSCDLVGKPADLYERFCAPVGNLFFAGEAACIDHSGSVHGAYSSGIVAAEDCRRHLSTQLGISDLFQVGKIIMREEMTEVMVPFQISRL</aaseq>

Gene Sequence

<dnaseqindica>1..34#1200..1315#1449..1537#1621..1734#1819..1906#1990..2075#2167..2269#2362..2459#2570..2999#3098..3418#ATGGACCAGCCTTCTAATGGCTTCGCCGCCGGAGGTGCGTCTCCGATCAGAATACTCCCCTGTTCTTTTTTTTCCATTTTTAGGTAGAGAAGTCATTTTTTATTTTATTATTTTTTTGCAAATTGATATGTTCATCAGTGCTATTCAATTTCAACCATGCATACAAATCCCACACGCAACTTTAGATTACTATCCAAGTATAAAATCCAAGTTGATTGTGTTACGGCAAATATTGCTGTCGACCTGTCGTGGACTGGCGTCCCAATCGCAATCGATTGTGTGAGTATGACAGTGCAGTGCTTTAGTGTCACAAATCGTAGGGGTCAGAATGTTTCGATTCAGTAAATGCTGATATGGAGCCATCCTTTTTTTTCTTTTTTTTTTTGGTTCCGGTGAATACGCAAAAGGGGTTGCGTAGCCATGGATTAAGGTGGTGAAAGCAAAGCTAAAATCCTATCGAATATGAAATGTGTACATATCTTTAACTTTATACCTTTTTTGTTCTATGTAATAATTATATAAATACATAAAGTAGGACCCTTCATTACTGTTTTCTTTTTTAAAAAACGAAATGTTGTAAAACGATCCTTTAATTGATTGGGGACCATCCCCCATTGTTTTAAATCTTGCAATATCAGATGAGTCACAGTAGTGTAGATACCATCAATCAGCAAGAATCTAGAGGAAAGGAAGGGATTGTGATGGCAATTTGCTAGCAAAACTGTGAAAGAGATGTGGAACAAGGTTCCAAAAATTGAGGTCTCTAAAAGAGTAAAAGGTCAATAGGAAAAAAATGGTATCCCTTGTCCAGAAGAAGTAGCATCCGAGGCCGAATTGTTTCCTTGTTCTTGATTGCATTTTTTGCAGAATATGCTGCTGCATCGATTAATCCAGACTGCTCTGCGTCAAATAACTCTATGGATCATTCTGCTCAATCTAATTCGAACATGACACTTTATTGCCAAAAACCAACTGTAATGAATAAATCACTAACAAAGATTATTCAGTTGGCCACTTGTGGGCTCGAAAGCACAACTATTTTCAGTCATAAATTTAACAAATGACACATGGTTGCACTGAATGAAACTTTAAATGTGCTTATTCATGTACATGTTTGAGAAATATGTGATATTAGTTGAGCTACAATTCCAAATTGATTTCAATATTTAACCCAGAAATTTACTGTGCGGTGCATTCAGGTCTTTTTCTTCGTCACATTGATGGGCAAAATGCCTCTCCCCCTTCTGTCATTGTGATTGGTGGAGGGATTTCAGGCATTGCAGCTGCTCGTGCGCTGTCTAATGCTTCGTTTAAGGTAAATGCTGTCATTGAAAGATGAAATAACTATATCTCTGTCTTCTATATTCTATTAGCTTATTGTCCAAAAATAAGTTAATGTTTTGATGCTTCCCGGGCCCTTTTTCTTAGATACTTTTACATAACTACAGGTCACACTATTAGAGTCACGGGACCGACTTGGTGGCCGTGTGCATACTGACTATTCTTTTGGCTGCCCAATTGACATGGGAGCATCTTGGTTAGTTGCATCCCAGAAGTAGCTATTTTCGCCGCCTTGCAACGTGTTTGGTTTTCATCTCATGGTTTTATCATGTGGTTCAGGTTGCATGGTGTATGCAATGAGAATTCATTGGCACCACTGATTAGGTTGCTTGGCCTTAGATTATATCGCACCAGTGGTGATAACTCTGTGCTATATGACCATGATCTGGAGAGGTTAGGAGTTATTCCTAACCCATAAGTTTATCCTCAACTTGATGGGCTTTCATTCTCTTACAATTGTTGTTTTTGTTCATTTAGCTATGCTCTCTTTGATAAGGATGGTCGTCAAGTTCCCCAGGAGATAGTGACAAAAGTCGGGGAAACATTTGAGAAAATTCTTAAGGAGGTATTGTCATCGTTTGCATTTCATTTGTTATCCATCAAATGCTTTTATGCAACTCTTGTGAGCTTACTTTGTTAATATTGCAGACGGTGAAAGTAAGAGCTGAACATGAAGATGACATGCCTCTTATTCAAGCCATCTCAATTGTGCTTGACAGGAATCCACACCTAAAGTAAGTGGAATTTAGCATTCACCTATATCTGGAATGGTGGTGCTTTAGCGACGGGGTGAAATGTTCTAATGATATGCATTCACTCTTACAGGCTTGATGGTTTGCAATATGAAGTACTGCAGTGGTGCATATGTAGGCTGGAGGCATGGTTTGCCACAGATGTGGATAATATATCTCTGAAAAATTGGGATCAGGTATGCAATAGGGGGCACTTTTGTATTTACATGCGCACATGAAGAATTGTTGTATTCACGTAGAGCAGTGGACTGACCTTTCAAATTTACAGGAACATGTTCTTACTGGTGGCCATGGGCTTATGGTGCATGGTTATGATCCTGTTATCAAAGCTCTCGCGCAAGATCTTGATATCCACCTGAACCACAGGTATGCAGTTACATATCCTCATGGCCAAGTAATTCACATAAGTTCTGTTTCATAGGTTTCATAGTTATAATCCCAAATCTATAGTATCTTATCTCTTAACTTTCCTCCAGGGTTACCAAAATCATCCAGAGGTACAACAAAACTATAGTATGTGTTGAAGATGGGACAAGCTTTGTTGCAGATGCTGCTATAATAACTGTCCCTCTTGGTGTACTTAAAGCAAATATCATCAAGTTTGAACCTGAGCTCCCAGATTGGAAGCTTTCATCAATATCTGATCTTGGTATTGGCATTGAGAACAAAATAGCCCTCCGCTTCAATAGTGTATTTTGGCCAAATGTAGAAGTGCTAGGCAGGGTTGCCCCAACATCAAATGCCTGCGGTTACTTTCTTAACCTTCACAAAGCCACAGGGCATCCGGTTCTTGTATGCATGGTAGCAGGAAGATTCGCATATGAATTCGAGAAGCTATCCGATGAAGAATCCGTAAACTTTGTCATGTCTCAGCTCAAGAAAATGCTACCAGGAGCTACTGAACCGGTAAATCCTCAAAATTCATTTTCAGACCATGTACAGTTGAGTACTGTCAATTTCAGACTATGAACAGTAGCTCTAACACTTGTGCTACACAACTGCAGGTCCAGTATTTGGTTTCAAGGTGGGGAACCGACCCGAATTCGCTTGGTTCTTATTCCTGCGACCTTGTTGGGAAGCCAGCTGACTTGTATGAAAGATTCTGTGCTCCGGTGGGCAACCTGTTTTTCGCTGGGGAGGCCGCCTGCATCGATCACTCTGGGTCCGTGCATGGAGCTTATTCTTCAGGCATTGTTGCTGCAGAGGATTGCCGAAGGCATCTGTCGACGCAGCTAGGCATCTCCGACCTTTTCCAGGTTGGGAAGATTATCATGAGGGAGGAGATGACTGAAGTCATGGTCCCCTTCCAGATATCCAGGCTGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA014122