Os12g0610500

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Gene Name

Os12g0610500

Description

SAM (and some other nucleotide) binding motif domain containing protein

Version

NM_001073779.1 GI:115489519 GeneID:4352762

Length

5555 bp

Definition

Oryza sativa Japonica Group Os12g0610500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:26017156..26022710

Sequence Coding Region

26017202..26017351,26017446..26017538,26017662..26017748,26018059..26018133,26018239..26018319
,26018831..26018958,26019051..26019284,26019400..26019574,26020183..26020266
,26020820..26021060,26021166..26021344,26021691..26021894

Expression

GEO Profiles:Os12g0610500

Genome Context

<gbrowseImage1> name=NC_008405:26017156..26022710 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:26017156..26022710 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggcggcgactccggcgagcggcggcggcggcggcgggtactcgtgcgagacggcggagcagacccgcgagtggatggaggccatctccgcctttctccacctccaccgcccgctcctcgaggcgcacgtcgtcaacttcttcaaggatcggctgtgggagatggtggatgcggagtggatggagtgcctccgcagggagcccgtggagagcttgctcatgttgccctccggatgtgttcaggagcactggcccagttcattgcgagattttgtactcactgcaaagtcacttgttcttccacgggagcagaagtcaccgcgatcactcctacccgacttgcatgtagcatcaattaatactgttctcgctcaaggaatgaactccaagaagaagcatgaaattgaaactctagctgggttggttcatgcaattaccaagagctgtggagcaaagacagtgattgatgtaggttctggccagggttatcttgcccaagccttatcttttgagtaccaactccctgttgtagcaatagatgcttcatcacatcatgcatcagttacaaatactcgtgcagaaagaataaagaagtactacactgctaaatgtgtagggaagcaacagctcagagtacctagaactgttacttgccatgtactttctagtgacacattagcagctgtgacattggaagcatgtcaggatgatcatgctgaacatgtaccagaaagtaaaaacttcaacgagagcagtccacagattgagaaaccaaatgacagcattcctccattagtccttgctggtcttcatgcttgtggtgatctttcagttaacatgctaaggctttttgtgtcgtgcgaacaagtaaaagcattgataagcattggctgttgctacaacttactctctgaggaatgccacgaagacacaaatacctgtcctggttttcctatgagcaaggctgctaaactatctaatttggtgcttaggaaaagcacccgtgaccttggttgccagagtgcagagagatggagaagtctcactaaggacatagccctacaaaattttgatatacatgccttccgtgctgcatttcaaatgtttcttgagaaacatttcccagaggtgtcaagatcgagtccatcaattgggaggcaaggaaaagcactacgccgtcaaaggcttaggaaagttatggaatcccctatggctatggcagaaactgacgctttatcatattccactcaaaaggaacaaatcatgaccaaagacgatccactgcccacaggccctaataattttaaagaggttcatgtagactttcttcccgagctttcaacagggtttgttgattcagctgtatctggagctgccgttgtaccagatgacatctatcttgataaatcacaaaagttcaccctgtttaaagatttcacagtgtcaggattaggtcgccttggctgtgattttgtggaaaatgttagtttacttgaaatatggaaggacgtgcaacccttcacggaatttataggtcccttctggtgccttcgggttgctttagggccactggtggaaacatatattttacttgaccggttactatttcttcaagagcaaggcagtgttattgaagcatctttgtttccgcttttcaatcccactatgtctccaaggaacatggcaattattgcttggaagttgtctgcaaatccttcaaaagtgtga</cdnaseq>

Protein Sequence

<aaseq>MAAATPASGGGGGGYSCETAEQTREWMEAISAFLHLHRPLLEAH VVNFFKDRLWEMVDAEWMECLRREPVESLLMLPSGCVQEHWPSSLRDFVLTAKSLVLP REQKSPRSLLPDLHVASINTVLAQGMNSKKKHEIETLAGLVHAITKSCGAKTVIDVGS GQGYLAQALSFEYQLPVVAIDASSHHASVTNTRAERIKKYYTAKCVGKQQLRVPRTVT CHVLSSDTLAAVTLEACQDDHAEHVPESKNFNESSPQIEKPNDSIPPLVLAGLHACGD LSVNMLRLFVSCEQVKALISIGCCYNLLSEECHEDTNTCPGFPMSKAAKLSNLVLRKS TRDLGCQSAERWRSLTKDIALQNFDIHAFRAAFQMFLEKHFPEVSRSSPSIGRQGKAL RRQRLRKVMESPMAMAETDALSYSTQKEQIMTKDDPLPTGPNNFKEVHVDFLPELSTG FVDSAVSGAAVVPDDIYLDKSQKFTLFKDFTVSGLGRLGCDFVENVSLLEIWKDVQPF TEFIGPFWCLRVALGPLVETYILLDRLLFLQEQGSVIEASLFPLFNPTMSPRNMAIIA WKLSANPSKV</aaseq>

Gene Sequence

<dnaseqindica>47..196#291..383#507..593#904..978#1084..1164#1676..1803#1896..2129#2245..2419#3028..3111#3665..3905#4011..4189#4536..4739#agaaaccaaccgtgtcaccactactcccctctcctcttcacaagcgatggcggcggcgactccggcgagcggcggcggcggcggcgggtactcgtgcgagacggcggagcagacccgcgagtggatggaggccatctccgcctttctccacctccaccgcccgctcctcgaggcgcacgtcgtcaacttcttcaaggtgagaggtgttttgggtgggggtttgggtgattgattccgtctcgctgaagctcacgagggggggtttggggttggggtttggttttgagcaggatcggctgtgggagatggtggatgcggagtggatggagtgcctccgcagggagcccgtggagagcttgctcatgttgccctccggatgtgttcaggcatggccacacactctctgaatagttctgatgggtgctacaagcctgacgtttcttcagttcttatgctgctgttgctgctgcggccaacttatgtcaattgtctactgttctattttgcaggagcactggcccagttcattgcgagattttgtactcactgcaaagtcacttgttcttccacgggagcagaagtcaccgcgatcagtatgttccatgaacataacttatcagattgtaggcattggctgtgctagcgctagctgttccctttttgaacagcaatggaagaaatcatgagctacaatgctacacatagccatatacaaaatcttggccgattttccacttgcattcctgttacatagttttagtgaactaataagacattaagcatgtggagttttcgtcacatttttcacatgcatcgctatcatttgtagccattgatttagcaaaacatgcctgtttctgccatctgtttaatcccgacgcatgttttcttcaatacttgcagctcctacccgacttgcatgtagcatcaattaatactgttctcgctcaaggaatgaactccaagaagaagcatgaagtaggtaatttgcttgtgctgataaagcttacttgtttttacaaacccatttatattataacctgttcgttgcattctcatgtttggagaggttgcttaatgcagattgaaactctagctgggttggttcatgcaattaccaagagctgtggagcaaagacagtgattgatgtaggttctggccaggtaagccatcttcatgaagaagctttgcaagtgtaaagtgtaaacaggattcgtttatgtaaggataattatacatcatctgataaatacttggtagttgactccatatttcactgcttttgatttggccatatcttcttaggataggttccttatattcattataacacagatgatttgcgaaattacttattgtttctatgcaaggccggtctaggtccacatgtcaatgatgcaatgagtggcacttctgtagttctgttagttaaacttatttgcaaattggaatcatactgtacaaagttaggtcatcttttggaactcttaaaatttgagatgtgtaatacttgcttggccaatctgtgaagtgtaaagtcataatttttctgtagaatttgcatatattgtaaattttctgttgcattccatgacttgattttccttggctattctgagaaaagttttgagttcttccatgattcattttcatccctgtatttgtttcttacagggttatcttgcccaagccttatcttttgagtaccaactccctgttgtagcaatagatgcttcatcacatcatgcatcagttacaaatactcgtgcagaaagaataaagaagtactacactgctaaatggtgtgactttcatcaatttaatcatacttacctaaatttgaactctgaactgatttatgttgttttaaataaatggccactattccttgcagtgtagggaagcaacagctcagagtacctagaactgttacttgccatgtactttctagtgacacattagcagctgtgacattggaagcatgtcaggatgatcatgctgaacatgtaccagaaagtaaaaacttcaacgagagcagtccacagattgagaaaccaaatgacagcattcctccattagtccttgctggtcttcatgcttgtggtgatctttcagttaacatgctaaggttcatttagtgaagtcttaccccctccaacctaaaaaaaaaaaatactgcagcttcaattttcccttttatgttgtaagccctttaaagcatgattattgtattctattgacaggctttttgtgtcgtgcgaacaagtaaaagcattgataagcattggctgttgctacaacttactctctgaggaatgccacgaagacacaaatacctgtcctggttttcctatgagcaaggctgctaaactatctaatttggtgcttaggaaaagcacccgtgaccttggttgccaggtattatggcatcttttgatcttcttgtttagacattctattttggtggtggaccttatttgaaggtactcagcatacaaaagacacagtagcacaagatagttgtttaattgattttgaacaaaaaaggttcaaaaagcttatggaggttcagtgttttttgtttgcttatatggttttcaatgctattgtttaacacactaatgctgtttagagatctttgcctccgcatttttttccatctgtcatcctatgcaacgagaacatattcagtgctgcatggttgaatatcagaaacatgtctgtgcctatgaattcaaatcatttctgaaatttattattgcttacattaacatattatctccattgttacttgagataatctagaataagtgattgcttcactttgccttttctttttgattccattcatgtgtagttgtttggtttttttaacatattgctactttgtgttaatagctatcatgtgatttttgtacatttttcattattaagatgcacgcttagaattgtgtaagttatgtgctgagttgacattatggtacataattctttttatttatgccttttttttcaatccttcttagagtgcagagagatggagaagtctcactaaggacatagccctacaaaattttgatatacatgccttccgtgctgcatttcaaatggtaaatgctctgttatttcaactcttgtcatataatatgcttgacttttcactcagtccttcactgttggtttctgtccattttatggtcatgtttatagtagcttcagctggtttgttgtacacgatattattatgtgagtttgcttgcttataggttgatcatggttagtagcttatggaacacctctaattaatctcgggagttttagaaagctggcttagatgtgcaatagcttatgatagggacctctataggatttcatgcctacatgtgagccacataagctggtttctgaattttaagatattaaccaagaatggcatttcctgtttatagttagatgcgatggttcatgacatgaaattggatctatgcttaaatgaacatatcgaccataattttagtattagcatcttcttggctatgattcttgttgcaagaagagattgggattcagattctagccactaaagtgttagaagctaattaacacttgttctttcatctcattcactgctttagactcatctaactatgtgtctcatggtagtttcttgagaaacatttcccagaggtgtcaagatcgagtccatcaattgggaggcaaggaaaagcactacgccgtcaaaggcttaggaaagttatggaatcccctatggctatggcagaaactgacgctttatcatattccactcaaaaggaacaaatcatgaccaaagacgatccactgcccacaggccctaataattttaaagaggttcatgtagactttcttcccgagctttcaacaggttagtaccttcaatggctttcagttacatttacacactacggcctacgggtgtttgactgttttagtttacaagtggacaatgaataatatttttcaacttcagggtttgttgattcagctgtatctggagctgccgttgtaccagatgacatctatcttgataaatcacaaaagttcaccctgtttaaagatttcacagtgtcaggattaggtcgccttggctgtgattttgtggaaaatgttagtttacttgaaatatggaaggacgtgcaacccttcacggtatgtcttggagtatcctttatgccttgctgtaggatagttccaagaagttaatggattaagtattttattatatattatttcttagtcctcaatcaaagtgaaaataatgttatcaggccttgaaaataatgtaatcaatatcatatgattagagtatgttcatagagaacataacacaatgtgcacaacagctatatgagagacatgcttgtaaatgtatttttgtatgttttttattcataagaatgtagaattaattgggatatgacagtaatttcattctttatttagtaccggaatgtctcatactgacaacctttgtaaccatctattgttcttgcaggaatttataggtcccttctggtgccttcgggttgctttagggccactggtggaaacatatattttacttgaccggttactatttcttcaagagcaaggcagtgttattgaagcatctttgtttccgcttttcaatcccactatgtctccaaggaacatggcaattattgcttggaagttgtctgcaaatccttcaaaagtgtgacatggtaactcctctcatgcctcagtttgtaggttgatgggatggtgttggttttaagtgtaagcagtttattctcatgtggcagagcaagttcttttattagatgtagagacaagtatcctttttgattggacatacaaaagaaaacacagcttatttgtagttgacatttttgtagccattgttgtgtccatgtgctggtacatggcctgcagcaacatgtggatttaccttatctttaaatgaaaagcaatcaacaatatgaaaatggtcttatctttagaatgatgagagcgataccttttttttcaatgatgcttggcatatgttagttgattcttagattttgcgtggtatacttgttctttagtatgtactattttgcacaggtaggatggagttctcagtttccaacactgcagaagtccttgcaaatccatatacgggagagtggaagattttgccctcgaacagtgtgcctttatccaataaatgctaagtcaacatctagaacggttccaaggccatccggtgcatggctgcttgtctctctgaagtgatatcatacaagttgccaccaaacttcacattccctgcaggctgcaatatgtttatgcaagatcgacaagctatcactaatcaaggaaaaagttgacgagtcaccttttgtctacagatatacaactcgctgttattatttatacttctttgaagtagattaatctttatattatcctaactggctggaaaatatgttcagcaaagcaacacggatgaattgtttcatgagatcttatttcttgcctatccttattc</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0610500, RefSeq:Os12g0610500