BGIOSGA014158

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Revision as of 03:53, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA014158| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA014158, complete gene.| tag = OsJ_165...")
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Gene Name

BGIOSGA014158

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA014158, complete gene.

LocusTag

OsJ_16524

Ensembl Transcript ID

BGIOSGA014158-TA

Ensembl Protein ID

BGIOSGA014158-PA

Length

4762

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:32977789..32982550

Sequence Coding Region

32982460..32982550,32982238..32982350,32981990..32982088,32981853..32981909,32981513..32981668
,32981341..32981425,32981141..32981231,32980541..32980618,32980342..32980461
,32979963..32980038,32979741..32979876,32978288..32979666,32977995..32978185
,32977789..32977897

Genome Context

<gbrowseImage1> name=IndicaChromosome04:32977789..32982550 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:32977789..32982550 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGTCCTCGCAGGAGAAGGCCAAGACGGGTGTTCTGAGAAATGCCGCAGCGCTGCTCGACGAAATGCAGCTCATGGGAGAAACACAGGGTGCCAAGAAGGTGATCAACTCGGAGCTCTGGCACGCTTGTGCCGGGCCGCTTGTGTGCTTGCCGCAGCGGGGGAGCCTCGTGTACTACTTCCCTCAGGGGCACAGTGAACAGGTTGCAGCGACAACTAGAAAGATTCCAAATTCCCGCATTCCGAACTACCCAAACCTGCCATCTCAGTTGCTGTGTCAAGTTCACAACATCACCTTGCATGCCGACAAGGACACTGATGAAGTTTATGCACAGATGACCCTTCAGCCAGTAAACTCTGAAACGGATGTATTCCCTATTCCAACTCTTGGTGCTTATACCAAAAGCAAGCACCCCACTGAATATTTCTGCAAGAATTTAACCGCAAGTGATACGAGTACACATGGTGGTTTCTCGGTGCCACGAAGGGCTGCAGAGAAGTTGTTCCCACAACTGGATTACTCAATGCAACCTCCTAACCAGGAGCTTATTGTTCGAGATTTGCATGATAACATGTGGACATTCCGTCACATTTATCGTGGACAGCCAAAACGACATCTTCTAACAACTGGATGGAGTCTCTTTGTTGGGGCAAAGCGTCTAAAAGCAGGGGACTCTGTCTTATTTATAAGCATGCACATTGGCGTTCTTGCTGCTGCAGCTCATGCCGCATCAAGTGGTAGTTCATTTACTATCTACTACAATCCTAGGACAAGTCCTTCGCCATTTGTAATTCCTGTAGCAAGGTACAACAAGGCAACATATATGCAACCATCAGTTGGAATGAGATTTGCGATGATGTTTGAGACAGAGGAGTCAAGCAAGCGCAGATACACAGGTACAGTTGTGGGAATAAGTGACTACGACCCCATGAGATGGCCCAATTCTAAATGGCGCAACTTACAGGTCGAATGGGATGAACATGGGTATGGAGAAAGACCTGAGCGTGTGAGCATATGGGATATTGAAACTCCAGAAAACACTCTTGTGTTCCCTTCGTCGACCTTGAATTCAAAGCGGCAATGTCTTCCTGGTTATGGAGTTTCAGTGCCTGGGATGGAAATTGGATCAGCAAATATGTCATCATTTCCAAGGGCTCAGGGTAATCCCTATGGCAGTTTGCAGCACATTCCAGCTGTTGGATCAGAATTGGCTATCATGCTTCTCAACCAATCTGGTCAAACCCTTGGGAGTCCCCTTAGTTTTCACCAGTCCTCATATTCTAGTATTATCCAAAATGTGAAGCAAAATTATATCCCTCCTCTAACAGTTAGCACTTCAGCTTGTTTGACAAAGCAAGAAAGCCTGCCTTCAGATGATGCCCAGCACCAGTTCCATATGGCAAATATGCAGAATGGTGATCTTGAAGGCTCTGAAGTCCAGCCTGTCATTGATTCGATTTCTGAGTCAAAGTTGAATGCTACATCAAGAGATCCAAGAAACACAGATTCATACACAAGTCGAAGTACTTCGGAGCAAAACAGTAAGGGTGAGCCTAGAGGCAAGACTCGTAGGAGTAAGAAGGGCTTGCCTCACAAAACCGTTTCAGAGAAATCTGACCTTTCTTCAGCCCCTTCTTGGATCTGTGACAATCAGCAGGTTGGTTTAGAATCGAAACTGGTTGGTTGTGATGAACAAGTAAACTGTGGAAATATTGAAGATTCATCAGGTGCACTTACTCAAGGTAATTTTGTTGGACAGCCGCATGGCCATCAGGTTGAACAAAAGGGAGTGCTGTCGCCACCAAAGGTAGAATCATCAAAATCACCTGATGGAGGAAAGTCTGTCAATTCGTTTCCAAACCAAGGGTGTTTTTCGCAGTTCATTGATGGTCTTGATTGGATGACTCAGCCTTCCTACTACCAAGACTCCAATGTAATTCAACCAGCCGGTGTGTCAGAGAACATTTTCAGTTCTTCTGCAGATATACCTCCCTCAATGATTGCTGATACTATGGAGACTTTTCAGGCTTCATGTCTTTCTGATTGCCTTCCTAATTCCATACAAGAATTCATCTCCAGCCCAGATCTGAATTCACTAACCTTTCTTTCACCTGACATGCAAAATTTGGAGGTCCAACTCCAGCATGATGGAAGCAATTTGCCAAGCACGTCCAACTCGTTTGTACAGATGAGTTTTTCTGAAGAGAGTGCAAGTCAGAGTGCAAACTTAAGTGGACTTCACATGGAATCTACACACAGAAGCATAAACACCACTTCATGCTCTCAACCAATGTCTACTGGGGGCTTTGATGCAGGGATGTACTCAAAGTTGCCACGTTTAAAAGAATCCCAAATCTTGTCTTTGCCAGAGATTCATACCAATTCCATGGGAACATCAGCTTGCAGTATGGATGCAACCGAGTACAGCCTTGACCGAAGTGCGAAGCCGATGAAACCACCAGTGCGGACATATACAAAGGTTCAAAAGCAAGGATCAGTTGGAAGATCTATCGATGTTACAGGGTTTAGAAATTACCATGAGTTGAGATCTGCCATCGCTTGCATGTTTGGTCTCCAGGGGAAATTGGAGCATCCTGGCAGTTCAGAGTGGAAGCTTGTATATGTCGACTACGAAAATGATGTTCTTCTTGTCGGAGATGATCCATGGGAGGAATTCATCAACTGTGTCCGGTGCATCCGGATTTTGTCACCTTCAGAAGTACAACAGATGAGCGAGAATGGCATGCATGTTTTGAACGACTGTATTCAAGCAGCTTAG</cdnaseq>

Protein Sequence

<aaseq>MASSQEKAKTGVLRNAAALLDEMQLMGETQGAKKVINSELWHACAGPLVCLPQRGSLVYYFPQGHSEQVAATTRKIPNSRIPNYPNLPSQLLCQVHNITLHADKDTDEVYAQMTLQPVNSETDVFPIPTLGAYTKSKHPTEYFCKNLTASDTSTHGGFSVPRRAAEKLFPQLDYSMQPPNQELIVRDLHDNMWTFRHIYRGQPKRHLLTTGWSLFVGAKRLKAGDSVLFISMHIGVLAAAAHAASSGSSFTIYYNPRTSPSPFVIPVARYNKATYMQPSVGMRFAMMFETEESSKRRYTGTVVGISDYDPMRWPNSKWRNLQVEWDEHGYGERPERVSIWDIETPENTLVFPSSTLNSKRQCLPGYGVSVPGMEIGSANMSSFPRAQGNPYGSLQHIPAVGSELAIMLLNQSGQTLGSPLSFHQSSYSSIIQNVKQNYIPPLTVSTSACLTKQESLPSDDAQHQFHMANMQNGDLEGSEVQPVIDSISESKLNATSRDPRNTDSYTSRSTSEQNSKGEPRGKTRRSKKGLPHKTVSEKSDLSSAPSWICDNQQVGLESKLVGCDEQVNCGNIEDSSGALTQGNFVGQPHGHQVEQKGVLSPPKVESSKSPDGGKSVNSFPNQGCFSQFIDGLDWMTQPSYYQDSNVIQPAGVSENIFSSSADIPPSMIADTMETFQASCLSDCLPNSIQEFISSPDLNSLTFLSPDMQNLEVQLQHDGSNLPSTSNSFVQMSFSEESASQSANLSGLHMESTHRSINTTSCSQPMSTGGFDAGMYSKLPRLKESQILSLPEIHTNSMGTSACSMDATEYSLDRSAKPMKPPVRTYTKVQKQGSVGRSIDVTGFRNYHELRSAIACMFGLQGKLEHPGSSEWKLVYVDYENDVLLVGDDPWEEFINCVRCIRILSPSEVQQMSENGMHVLNDCIQAA</aaseq>

Gene Sequence

<dnaseqindica>1..91#201..313#463..561#642..698#883..1038#1126..1210#1320..1410#1933..2010#2090..2209#2513..2588#2675..2810#2885..4263#4366..4556#4654..4762#ATGGCGTCCTCGCAGGAGAAGGCCAAGACGGGTGTTCTGAGAAATGCCGCAGCGCTGCTCGACGAAATGCAGCTCATGGGAGAAACACAGGGTGAGTGTTTCAGACTTTCAGTCAGATTCTGCTGCTTGTTGATGCATAATTGCGCACAAATTTGTTGCAATTTTTGGCATGATGCGAGTAGCGTCCGTTCCTTCTTCAGGTGCCAAGAAGGTGATCAACTCGGAGCTCTGGCACGCTTGTGCCGGGCCGCTTGTGTGCTTGCCGCAGCGGGGGAGCCTCGTGTACTACTTCCCTCAGGGGCACAGTGAACAGGTCAATCTTACTGTCTTTTTTCACAAATTGCAGCTAATCTCGTTTTGAAATGCTGCAACCATAGACAACAATTTGGTCAGATTGATGCTCAATAATACTTTGGGATTGCTATTGGAATGATCAATGTTGAAGGGATGATGCCCTTGCAGGTTGCAGCGACAACTAGAAAGATTCCAAATTCCCGCATTCCGAACTACCCAAACCTGCCATCTCAGTTGCTGTGTCAAGTTCACAACATCACCTTGCATGTGAGTTCAAGCAAATTCAATTCCAAACATATTTGTGGCCAAATGTGTTTTGCCTGTGCTTGATTGTTTGTTTTGCACAGGCCGACAAGGACACTGATGAAGTTTATGCACAGATGACCCTTCAGCCAGTAAACTCTGTAAGTATGATGTTTCTCTGTTACATTGTGTACTGAGTTCTGTACTACTTTATTTGGTTCTATTAAAATGTAAACACCAATTGTTATTGAAATGCATAAAATGTGATTACAGAAACAAAAATTCAGTGTGCAAGGAATAAAAGATGGATTCTAAATTAATATTTATTTGTGCCGTCTATTGTAGGAAACGGATGTATTCCCTATTCCAACTCTTGGTGCTTATACCAAAAGCAAGCACCCCACTGAATATTTCTGCAAGAATTTAACCGCAAGTGATACGAGTACACATGGTGGTTTCTCGGTGCCACGAAGGGCTGCAGAGAAGTTGTTCCCACAACTGGTATAGCCTTTATCTACATTTTGTTTGCCGCATAGTTTTTCTGTAAAAAAATGCTTCAGCTCATGGGTTTAAGTTTTGTACCGACAGGATTACTCAATGCAACCTCCTAACCAGGAGCTTATTGTTCGAGATTTGCATGATAACATGTGGACATTCCGTCACATTTATCGTGGTAGGGTCAAACAATATTCGGATTTTATTTGTCTTGTTCATTGATACATAAATATATGCTTCTTGGGCCACTGTCTCCTAAAAGTTTCTTCTTTTCTTGTCCCTTGCAGGACAGCCAAAACGACATCTTCTAACAACTGGATGGAGTCTCTTTGTTGGGGCAAAGCGTCTAAAAGCAGGGGACTCTGTCTTATTTATAAGGTGAAATAAGTTCTATAAATACATGCAAAGTCTGTTTGTTACTTAACCTGTGTGTGCTATCAGAAAATTGAATCTGAGATTGTTAAGCCTTTTGATACTAAACCCTATGCAACAATTCATGCATTGAAATACCACAAGAACTGCTTATGTTATTTGCTCTTTCGAAAGAATGTCCATTACCAGTATTAGATTTTCCTACAGCGGCTATCTACTTAACCTTAACCAATATATACATATTCAACTTTCTAGAATATTAAAATCTCAACAACAATAACTTTTCTATTTCTTGTCAGTTCTAATGTGAATATGACTGTTATAGGACACCGCACTTTTTACTCGCTCGGACTGACAACAGCTTGTATGTAATAGTATAATATTTTCTTCACAAATATGTGAGGATGAAATGCCATTTTTGACAGAAGTTCCTGATTGCAGGGATGAGAAGTCACAACTTCTTTTGGGTGTTAGGCGAGCCACGCGACAACAAACAATGTTGTCATCTTCTGTTCTATCTACTGATAGCATGCACATTGGCGTTCTTGCTGCTGCAGCTCATGCCGCATCAAGTGGTAGTTCATTTACTATCTACTACAATCCTAGGTACAGAAATTTACTTACCCTTTTACATATGCTTTTTTTTTTCCTGGTGAGCATTTGGTCATTCATGGAATCTCCATAGGACAAGTCCTTCGCCATTTGTAATTCCTGTAGCAAGGTACAACAAGGCAACATATATGCAACCATCAGTTGGAATGAGATTTGCGATGATGTTTGAGACAGAGGAGTCAAGCAAGCGCAGGTTTGTCCACTTTTTGTTCTCATTTTACATAGCTTTTGTTTTCTGTTTCAGATTTTATCTTTATGCTATTTATTTATGTCCACAAACTAGACCTTGGTGTACAACCGTGTAATGGATTATGCTGCTTTAAAAGTATAAATAATTCAACTGTGAATTTTCATGATTCACATTGGAAAAATAATGACTACATCAAATGTCGTTGCATGGGCATACTTGCGTTCTATGTTGAGTTTAGCGTTTTGTTGATTAAGTACAGCTAGAAAACATATTCCATATTGTAAACAAAATTGTCTTGTTTTACAGATACACAGGTACAGTTGTGGGAATAAGTGACTACGACCCCATGAGATGGCCCAATTCTAAATGGCGCAACTTACAGGTGCCTTTTTCATGCAAAAGCTTAAGGAAAACTCAGAATTCTGCCTATCATGGTGTATTTGATATTTATATACTTCTTGCTACTAGGTCGAATGGGATGAACATGGGTATGGAGAAAGACCTGAGCGTGTGAGCATATGGGATATTGAAACTCCAGAAAACACTCTTGTGTTCCCTTCGTCGACCTTGAATTCAAAGCGGCAATGTCTTCCTGGTTATGGAGGTATGTCTCTGACATATGCTATACAAATATTTATGGTCGTGCAATATGCTGAAACATGCCTTACCCTTTTGCAGTTTCAGTGCCTGGGATGGAAATTGGATCAGCAAATATGTCATCATTTCCAAGGGCTCAGGGTAATCCCTATGGCAGTTTGCAGCACATTCCAGCTGTTGGATCAGAATTGGCTATCATGCTTCTCAACCAATCTGGTCAAACCCTTGGGAGTCCCCTTAGTTTTCACCAGTCCTCATATTCTAGTATTATCCAAAATGTGAAGCAAAATTATATCCCTCCTCTAACAGTTAGCACTTCAGCTTGTTTGACAAAGCAAGAAAGCCTGCCTTCAGATGATGCCCAGCACCAGTTCCATATGGCAAATATGCAGAATGGTGATCTTGAAGGCTCTGAAGTCCAGCCTGTCATTGATTCGATTTCTGAGTCAAAGTTGAATGCTACATCAAGAGATCCAAGAAACACAGATTCATACACAAGTCGAAGTACTTCGGAGCAAAACAGTAAGGGTGAGCCTAGAGGCAAGACTCGTAGGAGTAAGAAGGGCTTGCCTCACAAAACCGTTTCAGAGAAATCTGACCTTTCTTCAGCCCCTTCTTGGATCTGTGACAATCAGCAGGTTGGTTTAGAATCGAAACTGGTTGGTTGTGATGAACAAGTAAACTGTGGAAATATTGAAGATTCATCAGGTGCACTTACTCAAGGTAATTTTGTTGGACAGCCGCATGGCCATCAGGTTGAACAAAAGGGAGTGCTGTCGCCACCAAAGGTAGAATCATCAAAATCACCTGATGGAGGAAAGTCTGTCAATTCGTTTCCAAACCAAGGGTGTTTTTCGCAGTTCATTGATGGTCTTGATTGGATGACTCAGCCTTCCTACTACCAAGACTCCAATGTAATTCAACCAGCCGGTGTGTCAGAGAACATTTTCAGTTCTTCTGCAGATATACCTCCCTCAATGATTGCTGATACTATGGAGACTTTTCAGGCTTCATGTCTTTCTGATTGCCTTCCTAATTCCATACAAGAATTCATCTCCAGCCCAGATCTGAATTCACTAACCTTTCTTTCACCTGACATGCAAAATTTGGAGGTCCAACTCCAGCATGATGGAAGCAATTTGCCAAGCACGTCCAACTCGTTTGTACAGATGAGTTTTTCTGAAGAGAGTGCAAGTCAGAGTGCAAACTTAAGTGGACTTCACATGGAATCTACACACAGAAGCATAAACACCACTTCATGCTCTCAACCAATGTCTACTGGGGGCTTTGATGCAGGGATGTACTCAAAGTTGCCACGTTTAAAAGAATCCCAAATCTTGTCTTTGCCAGAGATTCATACCAATTCCATGGGAACATCAGCTTGCAGTATGGATGCAACCGAGTACAGCCTTGACCGAAGTGCGAAGCCGATGAAACCACCAGTGCGGACATATACAAAGGTTTATACTACTTGACTGTTTATATGTTACCATTTGTCAAATGCTCTTGATAGTAAATATAACTTAACAACTATCTATTATGTTTTTTTTTGTAATACATAGGTTCAAAAGCAAGGATCAGTTGGAAGATCTATCGATGTTACAGGGTTTAGAAATTACCATGAGTTGAGATCTGCCATCGCTTGCATGTTTGGTCTCCAGGGGAAATTGGAGCATCCTGGCAGTTCAGAGTGGAAGCTTGTATATGTCGACTACGAAAATGATGTTCTTCTTGTCGGAGATGATCCATGGGAGTAAGTAGACATGTCTTCGAATTGGTGTCTCCTGTTCTTTCTACTCCTGGTCAGCATATTAATTGACACTCATACCTATGTGCTTTTGCTTCTACAGGGAATTCATCAACTGTGTCCGGTGCATCCGGATTTTGTCACCTTCAGAAGTACAACAGATGAGCGAGAATGGCATGCATGTTTTGAACGACTGTATTCAAGCAGCTTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA014158