BGIOSGA014175

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Revision as of 03:54, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA014175| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA014175, complete gene.| tag = OsJ_263...")
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Gene Name

BGIOSGA014175

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA014175, complete gene.

LocusTag

OsJ_26360

Ensembl Transcript ID

BGIOSGA014175-TA

Ensembl Protein ID

BGIOSGA014175-PA

Length

2272

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:32808852..32811123

Sequence Coding Region

32810594..32811123,32809727..32810273,32808852..32808926

Genome Context

<gbrowseImage1> name=IndicaChromosome04:32808852..32811123 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:32808852..32811123 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCTGATCAAGGATTCCGCCCCTTCTCAGCCTTGATGTCCGCGCCATCTACTGCGCAGCAGCATGTGGGTTCTTCATTCAGCACAGCAGTAGTTCAGGTGGCCGCAGCACAGCAGTCACACACAGATCATGGTAACATTTGCCTAGCTGATGATGATGGCTACTATTGGAGGATGACCGGACAGAGTACAACTCAGGGTGAGTCGTCTCCAACGATATTATCCCACTATCAATGTGCCCAAGCAAACTGTGTGGTCCAGAAAACAGTGGCATACACTGCAGATGTTGAAACATTTTACAGGGGCAGACACAATCATCTACGACAGTCAGATAGACTGGAGCCAATGTCTCAAGTTGGTGTGCTAGTTGAGGCATCAGATGCAGCAGGGGCTGCGGCTGGACCTTCGGTGCCTGAGACAGAAAATGGAGATGATCAATCGTCTGGTTCAAGTGATAGGAATGAAGACGATGCTGGTGATGTAGAAATGGACGAGGATGCAGCTGCTGGTGATCCCAATGCAATGCAAAGGAGAAAACTTAAGTCCAAGGTGTGGAAGGAATTTAAACTTGTGTTTAAGGATGGAAAGCTCCATACTGCCATATGTAATCATTGTAAACTCAGGCTCGTTGCAGAGACTAGAAATGGAACCAGCCACCTACGCCGACATCTGAAGATCTGTCCTGAAAAGGCTGGAACCAGCAGGGTGCAGAAAAAGCGAAGGAGTTCAACTTCGCAGTCACAGCCTGATTTACCTGTTTCAGAGAACTTGGAAAATGGTCAAGAAAATCCTTCACAGAACTTGGAAAATGGTCAAGAAAATCCTCTTGAAGAGTTTATGAGGGCTACGGTCCTGAAACTTTGTCCCTTCCCTGCCATGTACCGTGCAAGCTTTGCGTCATTTCTGGCGGGTAGAAATCCAGCTCCGAATATGGTTCCACAAACTACAGTTGAGGACAAGTTTATTAGTGTTTACGAGAAGGAAAAATTGAAGCTGAAGGAGAAAATAATAGCTACACCTGGCGGAGTTTTCCTGTCAGTGAATAAGTGGTACTCTGGGAGTTATGAAACAGGAATTAATAGCTATGGTCGCAACCGTGATCACAACCGGTCTTTTACAAAATTGGTGTGCATGCACACACGCACGAACTGA</cdnaseq>

Protein Sequence

<aaseq>MADQGFRPFSALMSAPSTAQQHVGSSFSTAVVQVAAAQQSHTDHGNICLADDDGYYWRMTGQSTTQGESSPTILSHYQCAQANCVVQKTVAYTADVETFYRGRHNHLRQSDRLEPMSQVGVLVEASDAAGAAAGPSVPETENGDDQSSGSSDRNEDDAGDVEMDEDAAAGDPNAMQRRKLKSKVWKEFKLVFKDGKLHTAICNHCKLRLVAETRNGTSHLRRHLKICPEKAGTSRVQKKRRSSTSQSQPDLPVSENLENGQENPSQNLENGQENPLEEFMRATVLKLCPFPAMYRASFASFLAGRNPAPNMVPQTTVEDKFISVYEKEKLKLKEKIIATPGGVFLSVNKWYSGSYETGINSYGRNRDHNRSFTKLVCMHTRTN</aaseq>

Gene Sequence

<dnaseqindica>1..530#851..1397#2198..2272#ATGGCTGATCAAGGATTCCGCCCCTTCTCAGCCTTGATGTCCGCGCCATCTACTGCGCAGCAGCATGTGGGTTCTTCATTCAGCACAGCAGTAGTTCAGGTGGCCGCAGCACAGCAGTCACACACAGATCATGGTAACATTTGCCTAGCTGATGATGATGGCTACTATTGGAGGATGACCGGACAGAGTACAACTCAGGGTGAGTCGTCTCCAACGATATTATCCCACTATCAATGTGCCCAAGCAAACTGTGTGGTCCAGAAAACAGTGGCATACACTGCAGATGTTGAAACATTTTACAGGGGCAGACACAATCATCTACGACAGTCAGATAGACTGGAGCCAATGTCTCAAGTTGGTGTGCTAGTTGAGGCATCAGATGCAGCAGGGGCTGCGGCTGGACCTTCGGTGCCTGAGACAGAAAATGGAGATGATCAATCGTCTGGTTCAAGTGATAGGAATGAAGACGATGCTGGTGATGTAGAAATGGACGAGGATGCAGCTGCTGGTGATCCCAATGCAATGCAAAGGTAATTTGCTTTTGTTACTTCCCCAACCTCCTTAAAATTGAAAAAAGATACAATATTTTCCCTAAATACTCTTGCTTTTCTTCTGTCTCCAAGCTTTTGTGCAAACTCAACATCCTTTGCACGCGTTGGAGAAGTATCTATCAACTTTTTTACCGTTTACAAATCCTGGATAAAAAATCCCCTGTTCCGTGAAACTGATAAAAAAAACTTGATTAGTTTGATTTATGATGACTCTGTTTGTGATTTTTCGTATGCACATATGTTGTGGTTTCAATAGAGAAATAATGATAAAGAGTAGTAATACCATATGTTGATTACAGGAGAAAACTTAAGTCCAAGGTGTGGAAGGAATTTAAACTTGTGTTTAAGGATGGAAAGCTCCATACTGCCATATGTAATCATTGTAAACTCAGGCTCGTTGCAGAGACTAGAAATGGAACCAGCCACCTACGCCGACATCTGAAGATCTGTCCTGAAAAGGCTGGAACCAGCAGGGTGCAGAAAAAGCGAAGGAGTTCAACTTCGCAGTCACAGCCTGATTTACCTGTTTCAGAGAACTTGGAAAATGGTCAAGAAAATCCTTCACAGAACTTGGAAAATGGTCAAGAAAATCCTCTTGAAGAGTTTATGAGGGCTACGGTCCTGAAACTTTGTCCCTTCCCTGCCATGTACCGTGCAAGCTTTGCGTCATTTCTGGCGGGTAGAAATCCAGCTCCGAATATGGTTCCACAAACTACAGTTGAGGACAAGTTTATTAGTGTTTACGAGAAGGAAAAATTGAAGCTGAAGGAGAAAATAATAGCTACACCTGGCGGAGTTTTCCTGTCAGTGAATAAGTGGTACTCTGGGAGTTATGAAACAGGAATTGTTTGTTTAACAGTGCACTTTATTGATGAAGAGTGGAAGATTAATAGAAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATAATTGCTTGATATCTTAAGGGTTTCAAAAGTGTTTTTGAAAGACCAAATTAACCCCCAAAGTTCTTATCTTTCTTTGACGTACGTAACAAATTAAGCTCGATCTTATGCTTAACGGTCAGAATAATATTCAACTGAGATCATCAAGGAAAACGTGTATATTAGAACAGCGCAACGAATTAACGTCAATGCTTAGTCGTCTTAGCATGTCACGAAGTCATCCATCGCGCAAAAACGTTTAGGAACAGCAAGCGCATGCAGAGATCGGCGTTTTTTCTTGCGTGTCGCCCGATCGAAGCAGGAAGTCCAGTGTAGTCCGTGCGCAGAGCCACCGCGACTGGATGGTAATAAGGAGAAAGAATGATCTAACTTAACCGAAAAAATCAGATTCTGGTTTCTAGATGGTAGTACAGGTCGATCAATTGTAATTACTTCTATGAGATTTTGTGGAGTTGAATGTTCTAGCTCCACAAACCTATAAATCTGCATGTTTAATTTCATTAATATCATTTAAATGAATCATCTTATTTTCATGATGAAATATAAAATTTTAAAACACTATAATTTAACACATAAATTTCAAATCAACTGTGGATTTAAAATATGAAGCTACACCAAACAGAATAGCTATGGTCGCAACCGTGATCACAACCGGTCTTTTACAAAATTGGTGTGCATGCACACACGCACGAACTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA014175