Os12g0611000

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Revision as of 10:36, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os12g0611000| Description = Similar to Zinc-finger protein Lsd1| Version = NM_001073782.1 GI:115489525 GeneID:4352767| Length = 3579 bp| Defini...")
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Gene Name

Os12g0611000

Description

Similar to Zinc-finger protein Lsd1

Version

NM_001073782.1 GI:115489525 GeneID:4352767

Length

3579 bp

Definition

Oryza sativa Japonica Group Os12g0611000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:26041724..26045302

Sequence Coding Region

26042171..26042215,26042326..26042397,26042492..26042554,26042647..26042756,26043539..26043652
,26044627..26044741

Expression

GEO Profiles:Os12g0611000

Genome Context

<gbrowseImage1> name=NC_008405:26041724..26045302 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:26041724..26045302 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcagagccagatcgtgtgccatgggtgcaggaacattctgctctacccgagaggggcaccgagcgtttgctgcgcggtgtgccatgccgtgtccagcacagcaccgtctccaggaatggatatagctcatcttatatgtggtggatgccgaactttattgatgtatactcgcaatgcgacatctgttagatgttcgtgctgcgatacagtcaatcttgtcagaccagtgagtagtatagctcacttgaactgtggccagtgccagacagtgttgatgtatccatacggagcaccttctgtcaagtgtgctatctgcaattttattacaaatactgggatgaatacaatgagacatttgccaccaaatggaacttcatatactgccccatcaacctctgctccaaccactcaatcacagaatgttactgttgttgttgaaaatcctatgacggtagatgcaaagggaaagttggtgagcaacgttgtagttggggttacaactggtggtaaaaagtaa</cdnaseq>

Protein Sequence

<aaseq>MQSQIVCHGCRNILLYPRGAPSVCCAVCHAVSSTAPSPGMDIAH LICGGCRTLLMYTRNATSVRCSCCDTVNLVRPVSSIAHLNCGQCQTVLMYPYGAPSVK CAICNFITNTGMNTMRHLPPNGTSYTAPSTSAPTTQSQNVTVVVENPMTVDAKGKLVS NVVVGVTTGGKK</aaseq>

Gene Sequence

<dnaseqindica>3088..3132#2906..2977#2749..2811#2547..2656#1651..1764#562..676#gtcctcctcctcctcgtcctcgtcgtcgtcatctccaacgcgagctcgacgaagccaaggagaggaggagagagagagagggagagagggaggagtgagaccgacgcgaaggcctccgcccccccgaatccggccaccgccattccgctagatcgttggcgcctcagcttcccttcctcccgcggtttcttttgttggagggatttctcgaggtaagcaaacagcaacccatcgtggaatgatgatgatgatgatgaattgagattgtttgggcgagcccggttggattgggtctgggcgattcgttgggagatctcggatgctcgttgattttagatttttggggggggggggggggggaatcgatcgatgcgggatttggacggtcagcttgcccaaaaattggggggcctttcttggcgattccaagattttaacctagcatttcgtggaattggtcgtttggttggggttgtaggattagggatttcggatttgattgtgctgtgatccgctatatgctgtgctgattgctctggcgggattttttttttggcaggcatgcagagccagatcgtgtgccatgggtgcaggaacattctgctctacccgagaggggcaccgagcgtttgctgcgcggtgtgccatgccgtgtccagcacagcaccgtctccaggtaatggcacatctaaagcttttgttagtttcgtttgtgcaatcgaccatcaaggttgcaaacactggccagaatttgccgggtcggccgaaggattaggccaacatgattttattaggattggaggatttacaggtacagattgcgattccatctcgacggtatgctgtcgaaaaaatcgacgtttcatccaagggatcagaatttcgagggttgatattagatatctgtattgcaatgttgatgcttgggtgacggtactctttgatgtatgcgatgatcaatccaaaaaaactgtttcttttgaacgctgctagaactccaatgttgcaagtccagttagacaaaggtcaagataagatagtgaaagagaggtaacatggaaatataaagggcattccacggctaacttatccttatagaaaacccagtgtactcattgtattagcttaaatatcatatactagcacatgctgctcagtttctaagcttacatccctagttctactgcctgattcccgcagactgcagcatttggttcttattcctttaaatggtgttgctgtttttttctactagattgtaattatctaccaaattatgttctgttccatagagtgtctcctgcataagatcttctttcgcaggctgttgtgtgatgtatttttttcatcaaacactgagccccttgtgggccaaaaagaaacggcttgatttttgagaaataataaagaattggtttgtcgtgaagcctagcagcgcatcctaatgtccaagtccaacagtcacctaggaggagctacaaatgccatatgtagaggattcctgaagcactgaatggggtagctcacgtaattagaatctaaacctcgggttatcgttttaccatcgctctcattgcttcatatcactgtgaactttgtagttgcttcaagttgtcatgctcatgaaagttgggtaaatttcatgtgcaggaatggatatagctcatcttatatgtggtggatgccgaactttattgatgtatactcgcaatgcgacatctgttagatgttcgtgctgcgatacagtcaatcttgtcagaccaggtacttgcatgtttgtggaattggcagaatttttattctgcttatccttaaaagcatctgcatttacctactgggcatgctaatgtattgcagtgtactaggtatgttatataaagccagtataggttgctcaggcacataaatctataattaattgtgttaagtgtaaaccaaccaaaattggtgatgttatgtatgtgaaaatcaatatagccctcttatttacagttaggttagtataaatttggtgtattgcaactttacataagctggtttcactgaaagctagactacatcagttcttacattgtttctgggctgttgacttctcatctggcaaatatgtatcattgactacttgatcagtgagttgaggtcagtttatttcaaaggcaatactcaaaattgtgtggagagcacctgtgttgctgaagtctttcttttctgattcttaaataatgctcagtttttcttttctgtggatgagtttgttatctcttatcgagacaaggactcaacatgtgttgctggtcccgattacgtgtgtgccatttctagtttcatttatatgattgaaatggagcaaatattttctgaagtataaaatcatggagtttaaagacaataagctgataataaaccttcactaggttcttgtcttccctgtatctctgtttcatgcatccaagtttcctcccatatactgtacatcattaatcatcatgatgtctgacatgtctctcaacttaatggattctgtttgattgtgaattatgatgcagtgagtagtatagctcacttgaactgtggccagtgccagacagtgttgatgtatccatacggagcaccttctgtcaagtgtgctatctgcaattttattacaaatactggggtaaggctgtttctttttactggttatctttgctggaaatgctataagtgctcatctacgcttattgacttcaaactatttcttatactcagatgaatacaatgagacatttgccaccaaatggaacttcatatactgccccatcaacctctgctgtatgtccagttgttcataccttgagttctcttgggcattcatattggtgatttccatctattaatcacttcttttttcccttgtcgttggcagccaaccactcaatcacagaatgttactgttgttgttgaaaatcctatgacggtagatgcaaagggaaagttggtaagccacctccttattgctatctcctgtcaaccttgcctgcgtgcatatttctaatccccagttaagtcattacattcttactgatttactccatgttttctacgcaggtgagcaacgttgtagttggggttacaactggtggtaaaaagtaacatattggcacacagtgcaccttgttttatgttccatatatggagttggaaatactttgtattatacacaaatgtttgtgatcaattgctggaaggaaccctgaagagcataggggcactcgcaatgtgcacaattacaatcaagctaaaaaaacaaactgcaggtgtgaatactgagatactgtagtttgttacccctgattcttttgtatgtaatatgagagctctgttggattttattgtgtgatcaaatcatctccagatggcactagctgccttctcaatgaataataacagattgcgttcaacatagcgcatgttttgtatacaacctgaatgagctgattttgtaaaatgcatggttttactactatttctggaactagactgagcatgccatctcatcgttcatgtgttaaaatttatttgcatattgtttctgtaagc</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0611000, RefSeq:Os12g0611000