BGIOSGA014188

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Revision as of 03:54, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA014188| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA014188, complete gene.| tag = OSJNBA0...")
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Gene Name

BGIOSGA014188

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA014188, complete gene.

LocusTag

OSJNBA0071I13.18

Ensembl Transcript ID

BGIOSGA014188-TA

Ensembl Protein ID

BGIOSGA014188-PA

Length

3228

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:32609739..32612966

Sequence Coding Region

32612661..32612966,32611699..32611723,32611491..32611606,32611293..32611379,32611071..32611187
,32610888..32610976,32610749..32610800,32610537..32610632,32610418..32610462
,32610249..32610338,32610059..32610130,32609739..32609867

Genome Context

<gbrowseImage1> name=IndicaChromosome04:32609739..32612966 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:32609739..32612966 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGGGGCGCTGGCGGCGTCGATCGCGTCGCACCTGCCGTCGGGGGTGTCGGCGGCGGTGGCGGCGCTGGCGGCGAGCCCGGGGGAGGTGGTGAGGAGGGCGGCGGGGCTGGAGGACGAGCTCCGGGAGCTTCTCCGGCTGAACGGCGGCGGGCGCGGGCGGGGCGGCGCGGCGGCGGAGCAGGGGCAGGGCGAGCAGACGAGGGACAGGTTCGTGCGCGCGTACGAGCGGCTCAAGAGTGAGCTGCTCAACGACCGAGCCTTCAACTTCGACTTCACTGAGGAGACCAGGCAGTGGGTCGCCAAGATGATGGACTACAACGTGCCAGGAGGGAAACTGAACCGTGGGCTCTCGGTGGTGGACAGCTACATGCTGCTGAGACAAGGAACCGAGGTTGACGACGAGGATTTCTACCTCGCCTGCGTGCTCGGTTGGTGCGTCGAATGGCTGCAAGCGTCAGCCCTTGTGCTCGATGACATCACGGACAACGCCTACACGAGGCGAGATAACCTCTGCTGGTACAAGCTACCAACGGTTGGCATGTCTGCTATAAACGATGGTGTGCTGCTCAAGTGCCATGTCCAGGCAATCATCAAGAGATACTTCAAGGAGAAGTTCTACTTCCTGGACCTCATGGAGCTATGGAACGAGATAGGCTTGCAGACTGCCATGGGGCAGATGCTGGATCTCATCACCACTCATACCGGCGCCAAGGATCTCGCCAGATACAGAATTCAGGGGTACCGTCGCATTGTCAAGTACAAGACATCATACTATTCGTTCTACCTGCCGGTTGCATGTGCATTACTCTTGAATGGCGCGAGATTGAGTGACTATGTTGAGCTGAAAAATGTACTTATCGAAATGGGCGTATACTTTCAGATACAGGATGACTACTTGGATTGCTTTGGTGACCCAGAAGTGATTGGCAAGGTTGGAACAGACATTGAAGACTACAAGTGTTCCTGGCTAATAGTACAGGCTATGGAACTCGCCAATGAGAATGAGATGAAAATACTATATGAGAACTACGGGAAGTCTGACCCAAAATGCGTAGCAGAAGTGAAGAGCGTTTACAGGGAGCTTGATCTTCAGGACATATTTTTGGAGTACGAGTCAAGAGTTTACAAGCACCTGGTTTCGACCATCGACGCCGAGACTGACCGTGCAATTCGGGATATTTTGAAGTCGTTTCTGAAGAAGATTTACAGGAGGAAGAAGTAG</cdnaseq>

Protein Sequence

<aaseq>MGALAASIASHLPSGVSAAVAALAASPGEVVRRAAGLEDELRELLRLNGGGRGRGGAAAEQGQGEQTRDRFVRAYERLKSELLNDRAFNFDFTEETRQWVAKMMDYNVPGGKLNRGLSVVDSYMLLRQGTEVDDEDFYLACVLGWCVEWLQASALVLDDITDNAYTRRDNLCWYKLPTVGMSAINDGVLLKCHVQAIIKRYFKEKFYFLDLMELWNEIGLQTAMGQMLDLITTHTGAKDLARYRIQGYRRIVKYKTSYYSFYLPVACALLLNGARLSDYVELKNVLIEMGVYFQIQDDYLDCFGDPEVIGKVGTDIEDYKCSWLIVQAMELANENEMKILYENYGKSDPKCVAEVKSVYRELDLQDIFLEYESRVYKHLVSTIDAETDRAIRDILKSFLKKIYRRKK</aaseq>

Gene Sequence

<dnaseqindica>1..306#1244..1268#1361..1476#1588..1674#1780..1896#1991..2079#2167..2218#2335..2430#2505..2549#2629..2718#2837..2908#3100..3228#ATGGGGGCGCTGGCGGCGTCGATCGCGTCGCACCTGCCGTCGGGGGTGTCGGCGGCGGTGGCGGCGCTGGCGGCGAGCCCGGGGGAGGTGGTGAGGAGGGCGGCGGGGCTGGAGGACGAGCTCCGGGAGCTTCTCCGGCTGAACGGCGGCGGGCGCGGGCGGGGCGGCGCGGCGGCGGAGCAGGGGCAGGGCGAGCAGACGAGGGACAGGTTCGTGCGCGCGTACGAGCGGCTCAAGAGTGAGCTGCTCAACGACCGAGCCTTCAACTTCGACTTCACTGAGGAGACCAGGCAGTGGGTCGCCAAGGTACGTCTTACTCTCTCTATACCTAATGAACACGATTAATTGCAAGTTTATTACTGTACAACATACATGTGGTTTGGATTAAATCATGCTTGATCCATGGATCGTTAAGGTTTAGATGCAGATTTAACTCGGTTTTCATTTGCATTTTTTTTCAAACTGTTAAACGGTGTGTTTTTTTAAAACCTTTTATATAAAAATTGCTTTAAAATATCAAATAAATTTATTTTAAGTTTAAAATAACTAAAGCTCAATTAATTGATTTTTTTTTCGTTTTGTGTGCTCTGACTTTATCTCCATCTTAATTTCTCCCAAACACTGTGCATACATAGTTCTGTCACCGACAAATGTCAAAATTTCAAACCTAACTTTAAACTCCATGATGGGGTTTTTCACCCCAAGTATATTTTTTAGCATTAGTTTTTTAACTATAAATAATACGTACTTTGACCAATAATATCTATAAAAGTAAGATGCTTTAAATAAAAAGAGTTGTATATTATGATAGTTTGTTTAATGATAAATCTAGTAACATCAATTTTATATTATTGATCTTTTTTATTTTTTTTGCTATTAAATAGTCAAAGTTAAAAATGATTGACTTAGCACTATTATGAACATGCTTATATTTTGAGACGGGGACATTATAAAATATTTTTGGTTGCTTAATTCATATGGCTTCTCTATACGCATCAAATTCACATTGATGGTTATGCCTGTCAAGATGAGTTCTTTAACTGTTCTTGGTACTAGTACCACTGAAAAAATGGTTCTTTTGTTTGTAACTTCTATGTTCAATACTTCAATCTAATCAAACCTGCAGAAATATTTTAACCTTGATGGTTTGTTTGGTAAAATACTTTTATATGGTGTTATCTCCGTTGTTTCTGACGAAAATGGAAATGTAATGCGTCCTCTGTTGTTTTCTTTGCTGTTGCAGATGATGGACTACAACGTGCCAGGAGGTGAGCAAGCTAGCATCCATGCCCATGCAGAATTGATCTGGCCCTGCTGCCCTGAAAGCTAAGCTGACATGTCTCGTGACGTTTTTCTGAAGGGAAACTGAACCGTGGGCTCTCGGTGGTGGACAGCTACATGCTGCTGAGACAAGGAACCGAGGTTGACGACGAGGATTTCTACCTCGCCTGCGTGCTCGGTTGGTGCGTCGAATGGGTAAACAACACCGTCATCCCTGCCCAATCACTAGCGAAACAAAACTCTGTTGTGTCAGTCTGTCAGATCTTGGTACTATTCATCATGAATTTTGGTGCCTGAATTCTGCAGCTGCAAGCGTCAGCCCTTGTGCTCGATGACATCACGGACAACGCCTACACGAGGCGAGATAACCTCTGCTGGTACAAGCTACCAACGGTGCGATCCATTACTTGCTGTGTTCTCTTTGTGGTAGATCTGAATCTCTGTCCTGAGAATGATTGATTAACTGAAAAATGTTCGTGTAATTGACAATTTTGTCAGGTTGGCATGTCTGCTATAAACGATGGTGTGCTGCTCAAGTGCCATGTCCAGGCAATCATCAAGAGATACTTCAAGGAGAAGTTCTACTTCCTGGACCTCATGGAGCTATGGAACGAGGTAATTGGAGGGCCTGAACAAACACAAAACTTGTTAGGATTTCATCTTTAATTGGCATATATTGCTCAGTTTTGATCTTTGTTTTTTGGGACAGATAGGCTTGCAGACTGCCATGGGGCAGATGCTGGATCTCATCACCACTCATACCGGCGCCAAGGATCTCGCCAGATACAGAATTCAGGGGTATGCATGCAGTGTTTAAGTAACTCTACTCAAGTTAAAATAGCATTAGTGATTTCTCTTAATTTGCTCCCAAATTGATTCTGCCAGGTACCGTCGCATTGTCAAGTACAAGACATCATACTATTCGTTCTACCTGCCGGTGAGTCTGGGCTTCAAACTGAACAGTTAAATGAATGATGAAATTCCTCTAGTTCTGAAAAGACAACTGTTTGTTGTAGTAGACCAGTAGTTCTGAATTTGTTTCCTTTTCATCAGGTTGCATGTGCATTACTCTTGAATGGCGCGAGATTGAGTGACTATGTTGAGCTGAAAAATGTACTTATCGAAATGGGCGTATACTTTCAGATACAGGTCCGTTTATACTTCCTAAATGGTTGTATTGTCCTCAACTTCATGATTAATTCTGACATAAATGCACTTCTCAGGATGACTACTTGGATTGCTTTGGTGACCCAGAAGTGATTGGCAAGGTACTTACATAAAAACTTGTCTTTACATTTTGTTTCTGCTGGTAAAATGCTCTGCTTTACTGAGCTCAATGTGGTACAGGTTGGAACAGACATTGAAGACTACAAGTGTTCCTGGCTAATAGTACAGGCTATGGAACTCGCCAATGAGAATGAGATGAAAATACTATATGTAAGAAAAACCACAATTTTTTTCTTCTATGCTATGATCTCTTCGGAGAAAGCAACCACAGATTTTTTCCAAGTACTAACTGCACATATATTTGCGTGTAAATTTGTTGATTTCTCAGGAGAACTACGGGAAGTCTGACCCAAAATGCGTAGCAGAAGTGAAGAGCGTTTACAGGGAGCTTGATCTTCAGGTACTACAACTCTTTCTAACCAGACTAGTTAGAAAGCATAATAAGATATGCAATGCCATGACCCTTTTAACAAGTTCATCTGGTTCTGTATTAGCCACCCTGATTGTTACTCGAAAGGTGAATTTTCCAACCACAGAAAAACGAGACATCTAACTGTGAACGTTTTTCTTGCTCCTTTATTACTTATGTAGGACATATTTTTGGAGTACGAGTCAAGAGTTTACAAGCACCTGGTTTCGACCATCGACGCCGAGACTGACCGTGCAATTCGGGATATTTTGAAGTCGTTTCTGAAGAAGATTTACAGGAGGAAGAAGTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA014188