BGIOSGA014212

From RiceWiki
Revision as of 03:54, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA014212| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA014212, complete gene.| tag = OSJNBB0...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA014212

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA014212, complete gene.

LocusTag

OSJNBB0059K02.9

Ensembl Transcript ID

BGIOSGA014212-TA

Ensembl Protein ID

BGIOSGA014212-PA

Length

1611

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:32137581..32139191

Sequence Coding Region

32139131..32139191,32138769..32138993,32138351..32138619,32137922..32138198,32137581..32137816

Genome Context

<gbrowseImage1> name=IndicaChromosome04:32137581..32139191 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:32137581..32139191 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGGCGAAGCTCTCCTTGCTACTTCCCGTCACCTGCTTCATCCTCTTCGTTCTGCATGCTGTTCATGTGGAGGCGCGTCCCGATCCTGCCGCTTTCGGCGACTCCGACAACGGGTTCTACACGCTGTTCGTGTTCGGCGATTCGTTCGCCGACACCGGCAATCTCCCCAAGCGCCGACTGAGCGAGCAGTCGCGCGAATGGTACTACCCCTACGGCCGTGACCGTGGCAACAACCGCCCAACCGGCCGCTTCTCCAACGCCATGGTCCAGTCCGATCTCATCGCACGGATGCTGGGGCGTCATGAGGCGCCTCCGACGTACAGGAGGGTGGACAACTACGTGCACCCGCACGGCATGAACTTCGCCGCCGGCGGCTCCGGCGTGTTCAAGCTGCCGAGCGGCGCGCCGACGCTCGACAAGCAGGTCGACCACTTCAGGGACCTGGTGCAGGACGGCACCATCACCCGCCGGAACCTCCGTAACTCCATCGCCCTCGTCGCCGTCTCCGGCAACGACTACGCCCGCCTCGCCAACGTCAACGACACTAGCAAGATGATCAAGTTTGTCGATGAGGTGACGAGCGAGATCGCGAAGCAGGTGCACAGGCTGAAGAACAACGGGGCGAGGAAGATCCTGGTGAACAACCTGCACCCCGTCGGCTGCACGCCGTGGGTAACCAGGCCGGGCAACTACTCCGGCTGCAGCTCCACCGGCAACATGGGCGCCTACCTCCACGGCAGCAACCTCCAACAGAAGCTCTCGCACCTCGACTACGTCCACCATGTCGACCTCAACACTGCCTTCTCCAACATCGTCAATCCCGACCAAGGTTCGAAGCACAAGGTGTCGAGCCAGTTCGAGCACAAGATGCAGCCGTGCTGCGAGAGCTTGGACCCGAACGGCTTCTGCGGGCAGAAGGGACACGATGGCAAGGACCTGTTCAGCGTGTGCAACGATCCGGAGAAGTACTTCTACTGGGACGATGTGCACCCCACGGAGGCTGGATGGAAGGCCGTCATGCAGCAGCTGGAAGGTCCAATCAAGAAATTCCTTGGAATCAACTAG</cdnaseq>

Protein Sequence

<aaseq>MAAKLSLLLPVTCFILFVLHAVHVEARPDPAAFGDSDNGFYTLFVFGDSFADTGNLPKRRLSEQSREWYYPYGRDRGNNRPTGRFSNAMVQSDLIARMLGRHEAPPTYRRVDNYVHPHGMNFAAGGSGVFKLPSGAPTLDKQVDHFRDLVQDGTITRRNLRNSIALVAVSGNDYARLANVNDTSKMIKFVDEVTSEIAKQVHRLKNNGARKILVNNLHPVGCTPWVTRPGNYSGCSSTGNMGAYLHGSNLQQKLSHLDYVHHVDLNTAFSNIVNPDQGSKHKVSSQFEHKMQPCCESLDPNGFCGQKGHDGKDLFSVCNDPEKYFYWDDVHPTEAGWKAVMQQLEGPIKKFLGIN</aaseq>

Gene Sequence

<dnaseqindica>1..61#199..423#573..841#994..1270#1376..1611#ATGGCGGCGAAGCTCTCCTTGCTACTTCCCGTCACCTGCTTCATCCTCTTCGTTCTGCATGGTACGTGCCATCTGCAGCGCCTTCATTCTTGGGCTTGATTATGTGTTCAATTATCAATTTAATATTAATTGATCAAATCAAATATTCATTTCTGACGAATTAATGAGATCGATAATGCGTGTGCGTATATATAACAGCTGTTCATGTGGAGGCGCGTCCCGATCCTGCCGCTTTCGGCGACTCCGACAACGGGTTCTACACGCTGTTCGTGTTCGGCGATTCGTTCGCCGACACCGGCAATCTCCCCAAGCGCCGACTGAGCGAGCAGTCGCGCGAATGGTACTACCCCTACGGCCGTGACCGTGGCAACAACCGCCCAACCGGCCGCTTCTCCAACGCCATGGTCCAGTCCGATCTCATCGGTAATTAACTAACTAACTATAACCTAATTATCCATTTTCAGATTGAATAATCGATCTTGAAGGAAATTTTCAACAGCATCCATTTTCAGATTCAATCTCAGATTGAAAATGTTACTGCGTACTTAATAATTTGGCTGTACATTTTGCAGCACGGATGCTGGGGCGTCATGAGGCGCCTCCGACGTACAGGAGGGTGGACAACTACGTGCACCCGCACGGCATGAACTTCGCCGCCGGCGGCTCCGGCGTGTTCAAGCTGCCGAGCGGCGCGCCGACGCTCGACAAGCAGGTCGACCACTTCAGGGACCTGGTGCAGGACGGCACCATCACCCGCCGGAACCTCCGTAACTCCATCGCCCTCGTCGCCGTCTCCGGCAACGACTACGCCCGCCTCGCCAACGTCAACGACACTAGCAAGGTCAGTACACAGATCGGGGAAAATGATTCTCGTTTCGTGCATGCTACCTAAATAGTCATCTAAATCAGCCTTCACACACATTAGCTACTGGAGTACGTCCTAGTTAACAGTCTTTCTGATCGATCGATATTGCATGTTCTTTGTGTTTGCAGATGATCAAGTTTGTCGATGAGGTGACGAGCGAGATCGCGAAGCAGGTGCACAGGCTGAAGAACAACGGGGCGAGGAAGATCCTGGTGAACAACCTGCACCCCGTCGGCTGCACGCCGTGGGTAACCAGGCCGGGCAACTACTCCGGCTGCAGCTCCACCGGCAACATGGGCGCCTACCTCCACGGCAGCAACCTCCAACAGAAGCTCTCGCACCTCGACTACGTCCACCATGTCGACCTCAACACTGCCTTCTCCAACATCGTCAATCCCGACCAAGGTAATATATAATTACTACGCATTGTTGATTCGTTTTAATTTCTTGATGAACTTTCATTTTTCTGTTTACAACGTACATGTGTCCATTGACGAATTTGATATGTAGGTTCGAAGCACAAGGTGTCGAGCCAGTTCGAGCACAAGATGCAGCCGTGCTGCGAGAGCTTGGACCCGAACGGCTTCTGCGGGCAGAAGGGACACGATGGCAAGGACCTGTTCAGCGTGTGCAACGATCCGGAGAAGTACTTCTACTGGGACGATGTGCACCCCACGGAGGCTGGATGGAAGGCCGTCATGCAGCAGCTGGAAGGTCCAATCAAGAAATTCCTTGGAATCAACTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA014212