BGIOSGA014229

From RiceWiki
Revision as of 03:55, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA014229| Description = Os04g0647300 protein| Definition = Oryza sativa Indica Group BGIOSGA014229, complete gene.| tag = OS04G0647300| tid ...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA014229

Description

Os04g0647300 protein

Definition

Oryza sativa Indica Group BGIOSGA014229, complete gene.

LocusTag

OS04G0647300

Ensembl Transcript ID

BGIOSGA014229-TA

Ensembl Protein ID

BGIOSGA014229-PA

Length

3304

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:31913828..31917131

Sequence Coding Region

31916455..31917131,31915321..31915445,31913828..31914591

Genome Context

<gbrowseImage1> name=IndicaChromosome04:31913828..31917131 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:31913828..31917131 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCTCCTCCCCCAGCTCCTCCTCGTCCCTGCCTCTACGCCTGCCTCTCCGTGCGCCGGCGTCTTCTGCCCCACCCATCGCCGCCTCCCACGCCTCCGGCTCCACATCCGGCGGGCACCAGATCGCCGTCGACGTCGAGCGCGCCGAGCTCTTCTGCGGGGCGTGCGGGGATCAGGTCTACGATCCGGACTTCGACCACGCCGTCGTCCTCGCCCAGTCCTCCCTCCCTCCCTCCCCNNCANTCGGCATCNNNCCCCTCCCNNCNCTCCCCTNNTCCCCCNNGNCCGCGCCNNNCCGCAANGGCGCCNNGNCCGCGTCNNGAGTANNCCGCGCGCCTGGGCACCAGATCCGGCCGAATTCGCGCTCATCAGCTCCGCCGATCCCACCACCTCCGCATCCGCCGCCGCGCCCGCGGGGCTCCGCGGGCTCAACAACCTAGGCAACACGTGCTTCATGAACTCCGTGCTCCAGGCTCTGCTACACGCGCCGCCGCTCCGGAACTACTTCCTCGGCGATCGGCACAACCGCTACCTCTGCCCGCGCCAGACGCCCATGAGGCGCCGTTCCGCCGAGGCAAACGACAAGGCGGCGTGCCTGGCGTGCGATCTCGACGAGATCTACTCCGCCGCCTTCTCCGGGGAGCGCACGCCCTACAGCCCCGCCAAATTCCTCTATAGCTGGTGGCAGCATGCATCAAATCTTGCGAGCTACGAGCAACAGGATGCACATGAATTTTTTATCTCCATCCTTGACCATATCCATGAAAATATAAAGGATGATCAACACAAATCACATGCCCAAGGCCATGGAGATTGTTGCATTGCACACAGGGTATTTTCTGGCATCTTGAGATCAGATGTCACCTGCACACATTGTGGGTTCACATCAACAACTTTTGAACCCTGTATGGACATCTCTCTAGACTTGGATGCTGGATATAACAATTCTCTTGGTGTTGCAAACCCAAAGGTACATGTGCGGAATGGAGAGCGAAGCTCAGGTGGCACTAATACCAAGGTATCAACACTCATGAGATGTTTGGAGCGGTTTACAAGGGCTGAGCGGTTGGATGCTGAACAGAAGTTCTTCTGTGAACGTTGCAAGGAGAGGCAAGAGTCCCTGAAGCAAATGTCCATTCGGAGGCTTCCATTGGTTTCATGCTTTCATATTAAGAGGTTTGAGCATTCATCAGTTAAGAAAATGTCAAGGAAGGTTGATCACTGTTTACAGTTTCCTTTTTCTCTTGACATGGCGCCATATCTATCGTCCTCTATACTCAGAAGCAGATTTGGGAACCGTATATTTCCATCAGAAGCTAGTGATGCAGATTCAGTTTCTGAATTTTCATCAGAATTTGAAATATTTGCGGTGATCATGCATAGTGGTAAGCTAGAAGCTGGCCATTATGTGACATATCTCAGGTTAAACAATCACTGGTACAAATGTGATGATGCCTGGGTAACCAGAGTTGAAGAGCATACTGTCAGAACCTCTCAGGCATACATGCTCTTCTATGTGCAGAAGACACTTTACTACAAAGCTTGTGAAAGAGCAACTGCTGTCTGA</cdnaseq>

Protein Sequence

<aaseq>MLLPQLLLVPASTPASPCAGVFCPTHRRLPRLRLHIRRAPDRRRRRARRALLRGVRGSGLRSGLRPRRRPRPVLPPSLPXXRHXXPPXXPLXPXXRAXPQXRXXRVXSXPRAWAPDPAEFALISSADPTTSASAAAPAGLRGLNNLGNTCFMNSVLQALLHAPPLRNYFLGDRHNRYLCPRQTPMRRRSAEANDKAACLACDLDEIYSAAFSGERTPYSPAKFLYSWWQHASNLASYEQQDAHEFFISILDHIHENIKDDQHKSHAQGHGDCCIAHRVFSGILRSDVTCTHCGFTSTTFEPCMDISLDLDAGYNNSLGVANPKVHVRNGERSSGGTNTKVSTLMRCLERFTRAERLDAEQKFFCERCKERQESLKQMSIRRLPLVSCFHIKRFEHSSVKKMSRKVDHCLQFPFSLDMAPYLSSSILRSRFGNRIFPSEASDADSVSEFSSEFEIFAVIMHSGKLEAGHYVTYLRLNNHWYKCDDAWVTRVEEHTVRTSQAYMLFYVQKTLYYKACERATAV</aaseq>

Gene Sequence

<dnaseqindica>1..677#1687..1811#2541..3304#ATGCTCCTCCCCCAGCTCCTCCTCGTCCCTGCCTCTACGCCTGCCTCTCCGTGCGCCGGCGTCTTCTGCCCCACCCATCGCCGCCTCCCACGCCTCCGGCTCCACATCCGGCGGGCACCAGATCGCCGTCGACGTCGAGCGCGCCGAGCTCTTCTGCGGGGCGTGCGGGGATCAGGTCTACGATCCGGACTTCGACCACGCCGTCGTCCTCGCCCAGTCCTCCCTCCCTCCCTCCCCNNCANTCGGCATCNNNCCCCTCCCNNCNCTCCCCTNNTCCCCCNNGNCCGCGCCNNNCCGCAANGGCGCCNNGNCCGCGTCNNGAGTANNCCGCGCGCCTGGGCACCAGATCCGGCCGAATTCGCGCTCATCAGCTCCGCCGATCCCACCACCTCCGCATCCGCCGCCGCGCCCGCGGGGCTCCGCGGGCTCAACAACCTAGGCAACACGTGCTTCATGAACTCCGTGCTCCAGGCTCTGCTACACGCGCCGCCGCTCCGGAACTACTTCCTCGGCGATCGGCACAACCGCTACCTCTGCCCGCGCCAGACGCCCATGAGGCGCCGTTCCGCCGAGGCAAACGACAAGGCGGCGTGCCTGGCGTGCGATCTCGACGAGATCTACTCCGCCGCCTTCTCCGGGGAGCGCACGCCCTACAGCCCCGCCAAATTCCTCTATAGGTCTGGATCTAGCGCTCTGTTTGCATTGGGTTGATGTCGTTGGGTGTTTTTTGAGCAACGTGCTGCTTTTTTAATGTTGGGTTCGTTGCGTACTTGGAAAGTTATTAAGATGAATCCGTTATATGAAATGGGTGCGTCATGTATTGTAACTAGTTTGGGATCGAATTGTATCAGTCTCTTGCAAATGATAGTGTTGTTTGTACGCTATGCCTTGAAACTGTTTGACGTAGATCATGATTATGTAGGTTGCAATTTGGAACTACTTATCAGTTAGCATGAAATGGGATGATGTGAGCAAGATATGCTACTAAAAGGGCGAGATCTGTTCCATATGTTTCGCTAGAAAGGGTAACGGTTTCACGTTTGGATGCACATGACCTGATTGATAAAATGTCATATGGTCTTAAGTACATTTCGCATGCTTAGAATTTGTTGAGCTATGTTCATGTATCAAGTACAAGTACTCCAAAATGCATGACCAGTTTTTAATTCTTCAGAGCACCTTCTTATCAGGTGCATTTGAAGCTATTTGCTCTATCATTGGATATGGGCCAAGTCATATGAGTGAATTGCATAATTTAAGTTAAAATTTTCTGCAATGACATCATATCTTGCTGCTGCGAAGGATAGTGTACAAGTATGTGGCAGGTACATAAGTTATTGCTAGCACTGCTGATACTTTAACAGGATATGTTTTTACAATTCGTTCATCGTAATATTCTTGTTTATGCCCTATGGGTATTCAGCAAACTGTTGTGATCATAGTGTGACATTATGTGACACAAAGGGTAATTATCAAGCCAAAGTAATGGTGTTCTAAAAAAAGCCGAAGTAATATTTTTAAACTTTAGTTTATATCTATGTGAAATTTAAATATGTGAAGTCTTTTTTTGCGGCTGATCTGGTTTGACGAACTTGGACTTGCACAGTAACATGGCATACTACTTTATTCTGGTTCATGAATTAAAGTGATTGTTTTTCTTCTGATTATTGTCGTTATGTTTGTTAGCTGGTGGCAGCATGCATCAAATCTTGCGAGCTACGAGCAACAGGATGCACATGAATTTTTTATCTCCATCCTTGACCATATCCATGAAAATATAAAGGATGATCAACACAAATCACATGCCCAAGGTAGTTAGCTTCTCTCCTGCTACTATTTAAATTAAAGCTTTTCCATCTATTCAACTGAACTGATATGTGAAAAGAAAAGAAGAATATCCACCCTTTTATTGTGAAAACAGTGCACCCTTGAGCCAAGAATGAATCAATACCAGTTTTATTTTTATTTTTATTTTTGGTTGAAGCAAAAAGCATATCTAAATCCATCTGTTGCTGGTAGTGTGGTGCATAGTGAACATTTGTGGCTGCTTTTGTACTATTTTTATTATTTGTCACTCCTACTCTTCTTTGGAGGATGACTCTATCCACCCTTTTATTGTGAAAACAGTGCACCCTTGAGCCAAGAATGAATCAATACCAGTTTTATTTTTATTTTTATTTTTATTTTTGGTTGAAGCAAAAAGCATATCTAAATCCATCTGTTGCTGGTAGTGTGGTGCATAGTGAACATTTGTGGCTGCTTTTGTACTATTTTTATTATTTGTCACTCCTACTCTTCTTTGGAGGATGACTCTACAGTAGGTTCTACACCCTAAAAACGAAAACAGGATAAGTCGTGGAAAATGGTAGTCCTGTACTATTTGGATATTGGGGAACAAATTGGACAAATGTGTTTTTTCTCTTTTTTGTTGTAGTGGAGAACATATTCTATCTTGCTTTTGATAGGCTGAACTATGATTTATATTGAGGCAGATGAGCTGTTATAGATCTAACTATTATGTGTATTTTTTTCCCTAATAGGCCATGGAGATTGTTGCATTGCACACAGGGTATTTTCTGGCATCTTGAGATCAGATGTCACCTGCACACATTGTGGGTTCACATCAACAACTTTTGAACCCTGTATGGACATCTCTCTAGACTTGGATGCTGGATATAACAATTCTCTTGGTGTTGCAAACCCAAAGGTACATGTGCGGAATGGAGAGCGAAGCTCAGGTGGCACTAATACCAAGGTATCAACACTCATGAGATGTTTGGAGCGGTTTACAAGGGCTGAGCGGTTGGATGCTGAACAGAAGTTCTTCTGTGAACGTTGCAAGGAGAGGCAAGAGTCCCTGAAGCAAATGTCCATTCGGAGGCTTCCATTGGTTTCATGCTTTCATATTAAGAGGTTTGAGCATTCATCAGTTAAGAAAATGTCAAGGAAGGTTGATCACTGTTTACAGTTTCCTTTTTCTCTTGACATGGCGCCATATCTATCGTCCTCTATACTCAGAAGCAGATTTGGGAACCGTATATTTCCATCAGAAGCTAGTGATGCAGATTCAGTTTCTGAATTTTCATCAGAATTTGAAATATTTGCGGTGATCATGCATAGTGGTAAGCTAGAAGCTGGCCATTATGTGACATATCTCAGGTTAAACAATCACTGGTACAAATGTGATGATGCCTGGGTAACCAGAGTTGAAGAGCATACTGTCAGAACCTCTCAGGCATACATGCTCTTCTATGTGCAGAAGACACTTTACTACAAAGCTTGTGAAAGAGCAACTGCTGTCTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA014229