BGIOSGA014235

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Revision as of 03:55, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA014235| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA014235, complete gene.| tag = OSJNBA0...")
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Gene Name

BGIOSGA014235

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA014235, complete gene.

LocusTag

OSJNBA0033G05.17

Ensembl Transcript ID

BGIOSGA014235-TA

Ensembl Protein ID

BGIOSGA014235-PA

Length

5024

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:31787646..31792669

Sequence Coding Region

31792355..31792669,31792187..31792262,31791590..31791675,31791063..31791156,31790912..31790988
,31790698..31790825,31789903..31789974,31789632..31789702,31788296..31788371
,31787859..31788002,31787646..31787685

Genome Context

<gbrowseImage1> name=IndicaChromosome04:31787646..31792669 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:31787646..31792669 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGTCCTGCTGCCCCTGCACCACCACCACCTCGTCTCCTCTCTCCCTGCCACGTCCCGCTTGCAGAGGCAGGTGGTCCGGCGGCGGCGGCAGCAGCGCCAACGCCGCCGCTTGGAGGGCGCGTGGAGGAGGAGCGAAGCGGAGTTTGGTAGTCGCGGCGAGCGGCAGCAAGGATGAGACGGCGGAGGGGAAAAAGCAGGAGGAGGAGGAGGAGTTCAACCCGTTCGGGTTCGTGACGGACAACCCGTCGAGCCGCGGCGCCATCCAGCTGCCGGAGTCGCCCGCCCAGGACGGCAATGTCGGCCAGATGCTCTACAGGATCGAGGACAAGGGGAGGGAGTTCGGCTCAAGAGTGAAATCAGGAAAGCTGCGGTGGTTTGTGAGGGAAACAGGTTCCGCTGGTGCACGACGTGGGACTGTCGTGTTTATTCACGGTGCTCCATCTCAGTCATTTAGCTATCGTATGGTTATGTCTCAGATGGCAGATGCTGGCTACCACTGCTTTGCTCCTGATTGGATAGGATTTGGGTTCAGTGATATGCCACAGCCCGGATATGGATTCGACTACACAGAAGAGGAGTTCCACAAGTCACTCGATGAGCTTCTTAGTACTTTAAATATCACTGAGCCATTCTTCTTAGTTGTCCAGGGATTTCTTGTAGGTTCATATGGGCTAACATGGGCACTAAAGAACTCAAGCAAAGTTCTGAAGGTAGCAATTCTTAACAGTCCACTCACTGTTTCTTCTCCAGTGCCTGGATTGTTTAACCAGCTAAGGTTGCCACTTTTTGGTGAATTTACCTGCCAAAATGCTGTTTTGGCTGAGAGATTCATTGAAGCAGGTAGCCCCTATGTGCTAAAGTCGGAGAAGGCTGATGTATACAGATTACCATATCTATCAAGTGGTGCACCTGGATTTGCATTGCTTGAAGCTGCCAGGAAAGCTAACTTCCGAGATGTATTAAGTAGAATTTCAGCCGGGTTTGCATCCAACAGCTGGGAAAAACCAATATTGCTTGCATGGGGGATTTCTGATAAGTATTTGCCACTCCCCATAGCTGAGGAGTTCCAGAAAGGTAATCCTGCAGCCATAAAATTGGAGCCAATAGAAGGAGCTGGTCATATGCCTCAAGAGGACTGGCCAGAGAAGGTTGTGACGGCCCTAAGATCCTTCTTGTAG</cdnaseq>

Protein Sequence

<aaseq>MSCCPCTTTTSSPLSLPRPACRGRWSGGGGSSANAAAWRARGGGAKRSLVVAASGSKDETAEGKKQEEEEEFNPFGFVTDNPSSRGAIQLPESPAQDGNVGQMLYRIEDKGREFGSRVKSGKLRWFVRETGSAGARRGTVVFIHGAPSQSFSYRMVMSQMADAGYHCFAPDWIGFGFSDMPQPGYGFDYTEEEFHKSLDELLSTLNITEPFFLVVQGFLVGSYGLTWALKNSSKVLKVAILNSPLTVSSPVPGLFNQLRLPLFGEFTCQNAVLAERFIEAGSPYVLKSEKADVYRLPYLSSGAPGFALLEAARKANFRDVLSRISAGFASNSWEKPILLAWGISDKYLPLPIAEEFQKGNPAAIKLEPIEGAGHMPQEDWPEKVVTALRSFL</aaseq>

Gene Sequence

<dnaseqindica>1..315#408..483#995..1080#1514..1607#1682..1758#1845..1972#2696..2767#2968..3038#4299..4374#4668..4811#4985..5024#ATGTCCTGCTGCCCCTGCACCACCACCACCTCGTCTCCTCTCTCCCTGCCACGTCCCGCTTGCAGAGGCAGGTGGTCCGGCGGCGGCGGCAGCAGCGCCAACGCCGCCGCTTGGAGGGCGCGTGGAGGAGGAGCGAAGCGGAGTTTGGTAGTCGCGGCGAGCGGCAGCAAGGATGAGACGGCGGAGGGGAAAAAGCAGGAGGAGGAGGAGGAGTTCAACCCGTTCGGGTTCGTGACGGACAACCCGTCGAGCCGCGGCGCCATCCAGCTGCCGGAGTCGCCCGCCCAGGACGGCAATGTCGGCCAGATGCTCTACGTAATGCCCACTTCGCCACACCTCCTTGATTCCGAACTCGTATCATTGTTGACCATTTCTAGTATGCTGTAAAGTAATCTCGACGCGTGCAGAGGATCGAGGACAAGGGGAGGGAGTTCGGCTCAAGAGTGAAATCAGGAAAGCTGCGGTGGTTTGTGAGGGAAACAGGTACTGTTTCTTCATTTCTGTGTTGGTTAGATGAAAGATGATCTTATTGCAGTGATCACTGAACGTTAGTAAAACGTTGTATGCACGTTGATCCAGTGAAATGGGGTGTGTACTGACGACGAAGCAGTATTGCATTGTGAATACAAATTTAGTATTTAAGAATAAAAACGAATGATACTTTCACTAAGATAGTGGATTTTGTCAGACCTTTGTGTATTTCAGTAATATTGATTTCTCCTACAGTAGTACATAAGTTCATCTCCTTCTGCAAAGCTTTTAAAGGAAACAAAACCTGTCCCAATTTGCTATAATTCTGCCTCTATAAAACTTAAGGAAAATGTACCTTTTTTTGTTTGTTTGTCTTGTACCTTGTCCTTGTATAGTTGTCATTGCTGAACCATGAAAAGAAGGGCTCACCAGGTGTTCTTGCAAACAGAGCCATCTTGCAATTGTCTCTGTCAAATAAAAAGCCCAATGTAATTGCTTCATAAATATGGTGATACAATTGTAGGTTCCGCTGGTGCACGACGTGGGACTGTCGTGTTTATTCACGGTGCTCCATCTCAGTCATTTAGCTATCGTATGGTTATGTCTCAGGTCAGACTCATTTATCTTGCAGCTTGTTGGACTAAACTTAATTTATGAAACAATTTGTTGTTCTTGATTTGCATTACCAGACAGAAAATATCAGTGGTTCTGGCTTAAATTAGTATGTGGTTCTTTCTAAAATATGTTTTCTTTCGCTGCAAAGTTTAGCTCCATGCACCATTTAAGTGGTGACTTTAGACATCTAACAGCTGCAGCATGTGTATGTCCTGTTGATTATGATTCCGAGACAGATGGGTGACCTTCCAGAGACTATTAAAATTTAAAAGAAAAACATAGTTTGAATATGGAGCATATTTATGACATTATACTGGAAGCTTAATAAATAGGGATCCTCATGTTAAATATAAATTTATAAATCGTACTAACGATTTGTTTCTATCGATCATTTTACCCACTAAGCAGCTATTGAAATTGCTACTAGATGGCAGATGCTGGCTACCACTGCTTTGCTCCTGATTGGATAGGATTTGGGTTCAGTGATATGCCACAGCCCGGATATGGATTCGACTACACAGGTGTGGCCGTGTGGCAAATGTTGACAAAATTAATGAATCTTACTAAACTCTCATTTATATTGTATCATGTGCAGAAGAGGAGTTCCACAAGTCACTCGATGAGCTTCTTAGTACTTTAAATATCACTGAGCCATTCTTCTTAGTTGTCCAGGTACATGCCCAAAACATTAGGAACCTGCATTTTCATAATAATTCTCATATATATTTTCTGAATCGTTTCTTTCATTTTCATTCTAGGGATTTCTTGTAGGTTCATATGGGCTAACATGGGCACTAAAGAACTCAAGCAAAGTTCTGAAGGTAGCAATTCTTAACAGTCCACTCACTGTTTCTTCTCCAGTGCCTGGATTGTTTAACCAGCTAAGGTCAGTCTTTCTGTTTCTCTTGCTTTGCATCTTAATTGAAGTGCATGCTCAGCATTTTACATTGTGCTACAAGTTCAGGCATATAGTTCTTTAGCTTTTCAACAAAATTTAACTTAAAAACAAGCCATATGTCTGCGTACACCAACATATCAACCAAATCCGCTATACATTGATAATGCAAGAATCTGAGCAAAGATGCATCAGTCACTGCTTTACCAGTCACTGCACATCTGAATGTTCCAGCTCCATTTCCTTGGCATTTCTACAATTTCTCAGGCCCGCCCGAACCCAGCCTGAGCAGAAGTCTGAAAGCGCAAAGCTTGACCTGAAAGTGTGACATAAATTTATGCATGAGCAATTTGACGTCCAGATCTACCCGAAAAATGAACATTGTGCATATTCTTTTTCACATTGTTTTCCTTCTTCAGTTTTATCGGATGTTATTGTGGACTTATTATATAGAAAATGCCTTGAGGGTGGTATGTTAATGCTTTCATCCGCCTTAATAGCGTAGTATGGTTTTTCACTATTAACTTTTATTTGGACTTTATACAAGCTGGTCCTAAAAAGAGTATGAGTATTTGATACATGTGCAAATAGAATTTATCTTTAACCTGCTTACTGCTCAATATTTTTCACTAATGCTGCAGTTGATGCCATCTTGCCTTTTTTGCCCTTAATATTTGTATCATGGAAGTAAATTCAAGTCACATTTCAATGCAGGTTGCCACTTTTTGGTGAATTTACCTGCCAAAATGCTGTTTTGGCTGAGAGATTCATTGAAGCAGGTAGCCCGTACGTATCTATCATTATCACAGAAATTCTTCATTCTCCTCTTCAGATATGTTATCATTATTCTTCTTACTGATATGCTCAAAATAAGGAAAAAGTTTGGTTTATTCTTCATATTATGTTGTTCTATATCAGTCCTGTCCATATCTGTGGCATGTTGTTTATTCTCATATTTGCTTATATTGTGTCCACTTGCTTCACAGCTATGTGCTAAAGTCGGAGAAGGCTGATGTATACAGATTACCATATCTATCAAGTGGTGCACCTGGATTTGGTTAGTCTGTACACCTGAATCACATGCCCCCAACATGTCTTTACATTAAAGTTGTATTGTTCTCAGCCATGAAACGTACCTAAATAAATTGTCAGCTATATGACTATGTTTTATCAATTTATAGAATCCATCTCTCCTAATGAAGGAAATGCAAATTCTGCTTGCACAGCCATTTCCATCTAGCTTACCTCCATCGCAATGATTGGGTTTTTCACATTGGCTTGCCAAGCTTGTCACAACCTCCTCCTTTGCCTGGGCTTGGGGCTGGGCTATATTCATAATAAAGGAAACGAAAATTCCACAGGGGAAACTATTTCCTTCTAGCTAATCCTAATTACTGTCCATGGGAAATACTCGAAGTTTATGTTTACATATTTTCACTCAATGCCTAGCTATTTTGGAAGTTATCTTATGAAGAAATGGCACTCGGTCCACATAAGTGTTTTCAGCAAAGGATCTTGATTATATTGCTTTAGCCTTCATAAAGCAAAACTGCAATTTTTAGAACCCTACTAGTTACACATATGATGATTACTGAAAAGTACCATGTTTTAATGTAGTTTATTATAGGATATTTGCTTGCATGTTTGGGCCAACAATTTGTATCTGTACCTTAGCCTGCATGGTTAATGTTGTACCTGCCAGGCTACCATGACAATTATATTGGTTGAACCTTGGACTTCGGAGGGAAGGATTATACTTGTTGAAGGCATCTGTTTAAGCTATTAAGTATTACATCATCTATATAAAAACTGTTGTTTTGTTCGTCCATTCTTTATATAAAGCTAATGCCCACTAAATACCTAAAGCTCAACATGCAAGCATAATATTTATTAGCACTCCTAAAACCTACACGCAAGCATGCCACATCAACCCATTAAACACAGGAAACTCAACATGCAGCATATAATAATTATATTTACAATTTATTTCATTCTAAAACTAAACACACACATGCTAAATCATCATTTTCAAATCATTTTCATAATATTTCAATCCAAATCGTTTCATCATTTTTCCATTGTCTAACATATATCCCGCAGCAAAGCGTGAAGTATCATCTAGTTTATGCTACACCTTATGCCAATAGCATCGAACAACTATTACTTCTTCTGCAACTTATGTTGTATTCCTTGTACTTTAAGAAAAATGATGTTTAGATTTTTTTTTATATTCTTTTGTCTACTTTTTACCTAGAACTGTCATTACCATCTGAGATTATTTGAAACCTTAGTTACATCTCGCTTTTCTTTTTTTTAGCATTGCTTGAAGCTGCCAGGAAAGCTAACTTCCGAGATGTATTAAGTAGAATTTCAGCCGGGTTTGCATCCAACAGGTAAGTTAAACAAACAAACAATCACTCATATTTATTGCATGTTATTGCTTCTGTTCTAACTAAAAACAGATAACTTAAACAAACAAACATATTTATTAGCTTCTGATATAATTAAAAACAGATAGATTATGCCGTATAACATGCAAGTTACTACTATGTCCATAAACATATGTATGCATGCACAGCAGCGTCAAAAGGTTCATTCTGAATTCAAGCAAGCAATAATATTAGACAGGTATCAGTTATCACTAATGTTTTCCAGTTCTGAAACTTCTCTCTGGTATTTCCTGCAGCTGGGAAAAACCAATATTGCTTGCATGGGGGATTTCTGATAAGTATTTGCCACTCCCCATAGCTGAGGAGTTCCAGAAAGGTAATCCTGCAGCCATAAAATTGGAGCCAATAGAAGGAGCTGGTCATATGCCTCAAGAGGACTGGTAATTGTTTTTTTACTAGCTCAGTATTTTCTGTCGATCTGTGTCCTGTAAAATTTGTACTCATAGTTCCATCGGTGCTTGCCTGCTTTGACGTGTAACCTTCAACCTTTACCTTTTGGCCAATTCATATACTTGTGCGATCCTTAACGCATCTCACTTGTCATGTTATGCAGGCCAGAGAAGGTTGTGACGGCCCTAAGATCCTTCTTGTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA014235