BGIOSGA014287

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Revision as of 03:55, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA014287| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA014287, complete gene.| tag = OsI_175...")
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Gene Name

BGIOSGA014287

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA014287, complete gene.

LocusTag

OsI_17559

Ensembl Transcript ID

BGIOSGA014287-TA

Ensembl Protein ID

BGIOSGA014287-PA

Length

4330

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:31170871..31175200

Sequence Coding Region

31175081..31175200,31173575..31174883,31173331..31173432,31173065..31173246,31172938..31172986
,31172456..31172693,31172219..31172366,31171948..31172054,31170871..31171063

Genome Context

<gbrowseImage1> name=IndicaChromosome04:31170871..31175200 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:31170871..31175200 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGAGATTTAGAGCCAAAGTATGGAAGGAAAAGGAAGATGAATGCAAGAACCTTGGTGGTTGGTGTGGCAGGAACGGAACAGAAGAATTTCCAACACCAAAGCCAGAGGGAGAAGCAAAAAGCTCCTGCCTTGCTTGTCCAAAAAAGAAGAACAAGGGCCAGATGAATATGGCCTACCTCCCAGTTCTCATCTACTTGCTGCTCATCTCTTTCTGCAAATGCGATGATCAGCTGACACAGGTAAATCGATTGATCTCCCCCAGCGGCAAGCTCGTCTCCAAGAGCGGCGTCTTTGCACTCGGTTTCTTCTCCCCAGCCACTTCCAACCAGAGCTTATTCCTCGGCATATGGTATAACAACATCCCAGAGCGAACATACGTTTGGGTTGCTAACCGTGACAACCCAATCACCACACCTTCATCAGCGATGCTCGCCATCAGCAATAGTTCTGACCTTGTATTGTCAGATTCCAAAGGTCGCACCGTCTGGACGACAATGGCAAATGTCACCGGAGGTGACGGAGCTTATGCAGTGCTGCTCGACTCAGGAAACTTGGTTCTCCGGCTGTCAAACAATGCAACCATATGGCAAAGTTTCGATCACCCAACTGACACCATTCTGTCGAACATGAAGATTCTGCTGAGGTACAAGGAGCAAGTAGGCATGCGGCTTGTAGCTTGGAAGGGCCTTGATGATCCAACAACGGGGGACTTCTCATGCAGCGGAGACCCCAGCTCAGACCTTCAGGTCTTCGTCTGGCACGGGACCAAGCCATATTACCGCTCCATTGTGCTTGACAGTGTGTGGGTGTCCGGCAAAGCATATGGCAGCAGCACCTCCTTCATGTACCAAACATATGTAAACACACAGGATGAGTTCTATGTTATCTACACCACCTCTGATGGCTCACCATACATGCGCATCATGCTTGACTACACGGGCACCTTCAGGCTCCTGAGTTGGAACGTCAACTCGTCATCATGGGCAATCTATTCTCAACGCCCAGCAGCCATTGGCGATTGTGATCCCTACGGCTCGTGTGGCCCATTCGGTTACTGTGACTTCACGTCGGTCATCCCAAGATGCCAGTGCCCGGATGGATTTGAGCCTAACGGCTCCAACTCTTCAAGTGGATGCCGGAGAAAGCAACAATTAAGATGTGGAGAAGGGAACCATTTCATGACCATGCCTGGAATGAAGCTCCCTGACAAGTTCTTTTATGTCCAGGACAGAAGCTTTGAGGAGTGCGCGGCTGAGTGTAGCCGAAACTGCTCATGCACGGCCTATGCTTACACCAACTTGACCATAACCGGCTCTCCCGGTACCACAGCCAGCCAGTCAAGGTGCTTGCTTTGGGTTGGTGAGCTTGTTGACATGGCGAGGAACAATCTTGGTGACAACTTGTACCTCCGGTTGGCCGACTCTCCAGGTCATAAAAAGAGCAGGTATGTAGTCAAGGTTGTAGTCCCCATTATAGCATGCGTGCTAATGCTCACGTGCATATACCTTGTCTGGAAATGGATATCGAAAGGTGAAAAGAGAAATAATGAAAATCAGAATAGAGCGATGCTAGGAAACTTTAGAGCTTCTCATGAAGTATATGAGCAAAATCAGGAATTCCCATGTATTAATTTTGAAGATGTTGTCACTGCAACAAACAATTTTAGTGATTCAAATATGCTTGGAGAAGGAGGTTTCGGCAAGGTTTATAAGGGCAAGTTGGGAGGTGGCAAAGAAGTTGCGGTTAAAAGACTCAGTACAGATCCAGCAAGTAAATTTATTCTTGATTGGCCAACAAGGTTCAAGATAATCAAAGGAGTAGCTAGAGGACTTCTTTATCTCCACCAAGATTCAAGGTTAACTATAATTCATAGAGATCTCAAAACAAGCAACATCTTGTTGGATGCGGATATGAGTCCTAAGATATCGGATTTTGGTATGGCAAGAATCTTTGGCGGAAACCAGCAAGAAGCAAATACTAACCGAGTTGTTGGAACATACGGTTACATGTCTCCTGAATACGCAATGGATGGGGTCTTTTCAGTCAAGTCTGACATATATAGCTTTGGTGTTATACTCTTGGAGATTGTAAGCGGTTTGAAGATTAGCTTACCTCAGCTGATGGATTTTCCCAACTTGTTGGCCTATGCATGGAGATTATGGAAGGATGATAAGACCATGGATTTGGTGGACTCATCCATTGCTGAGAGTTGCTCAAAAAACGAGGTTTTACTATGTATCCACATAGGCCTGTTAACTTCAGAAGTATACCTTGGCTTCAAGTGGCTCGCGACGAGGTGGCACCGTGGCACCGGCCACCGGGAGCTTGGCGCCACGGCTTGTAACCCCGTGAGGGCCGCCGTCTTCCCCCCTCAGCCGGCTGCCGTGGCGTCCGCCGCTGCAGCCGCTACTTCTCCAAATGCTTCAGCCGAGAGCGATTCCCCCTAG</cdnaseq>

Protein Sequence

<aaseq>MRFRAKVWKEKEDECKNLGGWCGRNGTEEFPTPKPEGEAKSSCLACPKKKNKGQMNMAYLPVLIYLLLISFCKCDDQLTQVNRLISPSGKLVSKSGVFALGFFSPATSNQSLFLGIWYNNIPERTYVWVANRDNPITTPSSAMLAISNSSDLVLSDSKGRTVWTTMANVTGGDGAYAVLLDSGNLVLRLSNNATIWQSFDHPTDTILSNMKILLRYKEQVGMRLVAWKGLDDPTTGDFSCSGDPSSDLQVFVWHGTKPYYRSIVLDSVWVSGKAYGSSTSFMYQTYVNTQDEFYVIYTTSDGSPYMRIMLDYTGTFRLLSWNVNSSSWAIYSQRPAAIGDCDPYGSCGPFGYCDFTSVIPRCQCPDGFEPNGSNSSSGCRRKQQLRCGEGNHFMTMPGMKLPDKFFYVQDRSFEECAAECSRNCSCTAYAYTNLTITGSPGTTASQSRCLLWVGELVDMARNNLGDNLYLRLADSPGHKKSRYVVKVVVPIIACVLMLTCIYLVWKWISKGEKRNNENQNRAMLGNFRASHEVYEQNQEFPCINFEDVVTATNNFSDSNMLGEGGFGKVYKGKLGGGKEVAVKRLSTDPASKFILDWPTRFKIIKGVARGLLYLHQDSRLTIIHRDLKTSNILLDADMSPKISDFGMARIFGGNQQEANTNRVVGTYGYMSPEYAMDGVFSVKSDIYSFGVILLEIVSGLKISLPQLMDFPNLLAYAWRLWKDDKTMDLVDSSIAESCSKNEVLLCIHIGLLTSEVYLGFKWLATRWHRGTGHRELGATACNPVRAAVFPPQPAAVASAAAAATSPNASAESDSP</aaseq>

Gene Sequence

<dnaseqindica>1..120#318..1626#1769..1870#1955..2136#2215..2263#2508..2745#2835..2982#3147..3253#4138..4330#ATGAGATTTAGAGCCAAAGTATGGAAGGAAAAGGAAGATGAATGCAAGAACCTTGGTGGTTGGTGTGGCAGGAACGGAACAGAAGAATTTCCAACACCAAAGCCAGAGGGAGAAGCAAAAGTAGCTGCCCAATTGTGCAGGAGTTAAATCAGATAGAGCTTAGCAGAGCTTAGCCTGGTAATTTCAAGAGCTACGAGAGCAGTTCTCCTTTTTATCAGATGTACATCTTCTTTTCCAGTTGCCTCGCCTCTCCTCGGGCTCTTCTTTTGTAAGACTCTGTGTCTTTTTAATCGCATAATCTAATTTTGATTTTGCAGAGCTCCTGCCTTGCTTGTCCAAAAAAGAAGAACAAGGGCCAGATGAATATGGCCTACCTCCCAGTTCTCATCTACTTGCTGCTCATCTCTTTCTGCAAATGCGATGATCAGCTGACACAGGTAAATCGATTGATCTCCCCCAGCGGCAAGCTCGTCTCCAAGAGCGGCGTCTTTGCACTCGGTTTCTTCTCCCCAGCCACTTCCAACCAGAGCTTATTCCTCGGCATATGGTATAACAACATCCCAGAGCGAACATACGTTTGGGTTGCTAACCGTGACAACCCAATCACCACACCTTCATCAGCGATGCTCGCCATCAGCAATAGTTCTGACCTTGTATTGTCAGATTCCAAAGGTCGCACCGTCTGGACGACAATGGCAAATGTCACCGGAGGTGACGGAGCTTATGCAGTGCTGCTCGACTCAGGAAACTTGGTTCTCCGGCTGTCAAACAATGCAACCATATGGCAAAGTTTCGATCACCCAACTGACACCATTCTGTCGAACATGAAGATTCTGCTGAGGTACAAGGAGCAAGTAGGCATGCGGCTTGTAGCTTGGAAGGGCCTTGATGATCCAACAACGGGGGACTTCTCATGCAGCGGAGACCCCAGCTCAGACCTTCAGGTCTTCGTCTGGCACGGGACCAAGCCATATTACCGCTCCATTGTGCTTGACAGTGTGTGGGTGTCCGGCAAAGCATATGGCAGCAGCACCTCCTTCATGTACCAAACATATGTAAACACACAGGATGAGTTCTATGTTATCTACACCACCTCTGATGGCTCACCATACATGCGCATCATGCTTGACTACACGGGCACCTTCAGGCTCCTGAGTTGGAACGTCAACTCGTCATCATGGGCAATCTATTCTCAACGCCCAGCAGCCATTGGCGATTGTGATCCCTACGGCTCGTGTGGCCCATTCGGTTACTGTGACTTCACGTCGGTCATCCCAAGATGCCAGTGCCCGGATGGATTTGAGCCTAACGGCTCCAACTCTTCAAGTGGATGCCGGAGAAAGCAACAATTAAGATGTGGAGAAGGGAACCATTTCATGACCATGCCTGGAATGAAGCTCCCTGACAAGTTCTTTTATGTCCAGGACAGAAGCTTTGAGGAGTGCGCGGCTGAGTGTAGCCGAAACTGCTCATGCACGGCCTATGCTTACACCAACTTGACCATAACCGGCTCTCCCGGTACCACAGCCAGCCAGTCAAGGTGCTTGCTTTGGGTTGGTGAGCTTGTTGACATGGCGAGGAACAATCTTGGTGACAACTTGTACCTCCGGTTGGCCGACTCTCCAGGTATGCCCACCTTTTATCCCTGTGGTGACAAATGGCAATAAAGATCTTAGATAGCCTGAACATCCAATTAAAAGCAACATCCATGCATATACCTGCAATCTATGGTTAGAAATTCTGAAAGCTTCTTCATTTCTCTTAATAGGTCATAAAAAGAGCAGGTATGTAGTCAAGGTTGTAGTCCCCATTATAGCATGCGTGCTAATGCTCACGTGCATATACCTTGTCTGGAAATGGATATCGAAAGGTACAGCAGGAGCCAATACTCAACACCGACTCATATCATGTTTTCCTCCTGTAATTGTACTTATGATATTGATGTTCCTATTAGGTGAAAAGAGAAATAATGAAAATCAGAATAGAGCGATGCTAGGAAACTTTAGAGCTTCTCATGAAGTATATGAGCAAAATCAGGAATTCCCATGTATTAATTTTGAAGATGTTGTCACTGCAACAAACAATTTTAGTGATTCAAATATGCTTGGAGAAGGAGGTTTCGGCAAGGTTTATAAGGTAACAATTTACACAGACAAACGCAACAGTGGAGAAACCTACAACATTTTATCATGCTAAAATGATGTTATTATACAGGGCAAGTTGGGAGGTGGCAAAGAAGTTGCGGTTAAAAGACTCAGTACAGGTTCCACACAGGGATTAGAGCATTTTACAAATGAAGTGGTCCTTATTGCCAAATTGCAGCACAAAAATCTTGTTAGGCTTCTTGGTTGCTGCATTCATGGAGATGAAAAGCTCCTTATTTATGAATACTTACCAAACAAAAGCTTGGATCACTTCCTTTTTGGTACTGTTCAGAAACTTACCACATGATCCAGATATAATTGGCTGAATGCTTACTAATTAGCATTATTCACCATTGTTGATAGATCCAGCAAGTAAATTTATTCTTGATTGGCCAACAAGGTTCAAGATAATCAAAGGAGTAGCTAGAGGACTTCTTTATCTCCACCAAGATTCAAGGTTAACTATAATTCATAGAGATCTCAAAACAAGCAACATCTTGTTGGATGCGGATATGAGTCCTAAGATATCGGATTTTGGTATGGCAAGAATCTTTGGCGGAAACCAGCAAGAAGCAAATACTAACCGAGTTGTTGGAACATAGTGAGTGATTTATGTGTTAGTGTTTAGAATGATATTTATTTCCTTTCCTGAAACAATATTTGTTACTTATGGCTAAAACTGTTAAGCAGCGGTTACATGTCTCCTGAATACGCAATGGATGGGGTCTTTTCAGTCAAGTCTGACATATATAGCTTTGGTGTTATACTCTTGGAGATTGTAAGCGGTTTGAAGATTAGCTTACCTCAGCTGATGGATTTTCCCAACTTGTTGGCCTATGTAAGTACGGTGAAATGATCTATCTTCATATAATGCAAACTTTTTTTCTTTTTTTTTTGCCGGGTCGGCCGAAGGAACCGGCGACCAAATTTCATTAAGATTGGGAGGAATATAATGCAAACTAACTGTACTGATTTTATATGGACCCTATTCTATTGGTTCAGGCATGGAGATTATGGAAGGATGATAAGACCATGGATTTGGTGGACTCATCCATTGCTGAGAGTTGCTCAAAAAACGAGGTTTTACTATGTATCCACATAGGCCTGTTGTGCGTGCAAGATAATCCAAATAGTAGGCCACTCATGTCTTCTGTTGTTTTCATGTTGGAGAACGAACAGGCAGCACTTCCCGCTCCAATACAACCTGTGTATTTTGCACATAGGGCCTCTGAAACCAAACAAACAGGGGAAAATACCAGCAGCTCTAATAATAACATGAGTCTCACGGTATTAGAGGGACGGTAGATGTTTATGTTACCTATTTTCTGCATAGAAAGCATTTAGATTTTACCACTTCTGTAATTAGTTTGTTCTTTTCCATAAAATATTAGAAACAAAGGGCAGATGTTACATTTTTTTTGGATGAGTTTTTTCTTTTATCATGGCCCTTGAGATGGTATTTTTAATGTGCAGGTATTACAAAATAACAGTAGATAATGTGGTTCTCGATACACTGCCCTGCAAAAGAATCGCAACATATTTTTACCATCAATTCATTAAACTATTCTAAGTTGGATGTATACAGTTTAAAAGTTGGGAAGTTATAAAATACTTCCTCCGTTTCACAATGTAAGTTATTCTAGCATTTTCCACATTCATATTGATACAAAATGCTAGAATAACTTACATTGTGAAACGGAGGGAGTAGGCTATATCAAAAAAACACTCCCAAGACAACTGTATGGAGAGTAGGATCATAACATGCGTGATTGTGTGCAATATATTTTGGCATGACAATTTTTTTTGAGGGGAAATATGGGAATAACAAAGTCTTTGATGACAAAATTAATTATTTACTATCGCTTTTTATCCACTTTCAATCATTTTCTTCAGGCTCACTCAATACCACCAATTAAAAGTCTGAAAAATATCCTCAATCTAAAAACTTCGACCAAGTCCTAGTAGTTAATCTTGGAATATAAATCCAAATCAGAACTTCAGAAGTATACCTTGGCTTCAAGTGGCTCGCGACGAGGTGGCACCGTGGCACCGGCCACCGGGAGCTTGGCGCCACGGCTTGTAACCCCGTGAGGGCCGCCGTCTTCCCCCCTCAGCCGGCTGCCGTGGCGTCCGCCGCTGCAGCCGCTACTTCTCCAAATGCTTCAGCCGAGAGCGATTCCCCCTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA014287