BGIOSGA014306

From RiceWiki
Revision as of 03:56, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA014306| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA014306, complete gene.| tag = OsI_175...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA014306

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA014306, complete gene.

LocusTag

OsI_17517

Ensembl Transcript ID

BGIOSGA014306-TA

Ensembl Protein ID

BGIOSGA014306-PA

Length

3315

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:30915423..30918737

Sequence Coding Region

30918695..30918737,30918012..30918112,30916435..30917331,30915423..30915797

Genome Context

<gbrowseImage1> name=IndicaChromosome04:30915423..30918737 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:30915423..30918737 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGAGACCCGTGCCACCGAGTGCAGGACGATGCAGCTCCTCCACAAATTGGACACATCTTCAAAGATAATTTACGCTCCGCGGCAGCAAGATGATATTTATGCGGGCATAATGCCAGAACTCCCGCTCGATAAACTTCCGGAGGATATCTTGCATCATGTATATTCTCTAATGCCATTGAAAGATGCCGCTCGTGCTGCTTGTGTGTCGCATGGATTTCTACGTTGCTGGAGACGCTATCCAATCCTTGTATTAAATAGCAAAACAATAGGTTTGGCTAAGAGAAAACTTAGTTTGTATGCGGAAGATGTGCCATTGTATGAGCCAGCGCTTAAAGTGGATGACATGGAAAGCTATGCCATCAGTAAAATTGACCATATTATTAATAACCACTCTGGCATTGGGGTCAAAGTGTTTAAACTTCAACTGTTTGCCTGTCCGAACATAGATGCTGCTGTTCTTGACAAATGGTTTGTACATGTTATCAAAGCTGGGATCAAAGAACTCTCCTTGGAGATGTCTTTATGCAAAAAAAGGACAGAATACAACTTCCCATGTTCCATTCTATCAAGTAAGGCAGGTGGAGGGACAATTCAGTCACTTTTCCTCTCCTCTTGTTCTTTTCATCCTACAGTGGCTCTAGGTTGCAACATAAGCTTGACAAGCTTACATTTATATGAAGTTCATATTTCTGGGGAGGAGATAGGGCAGTTCCTTTCCAATTCATTCGCTTTGGAGAGATTGGTAATTTCTGATTGCAATGACATAATCCAGTTTAAGGTACCTTGCCTGATGCAGCAGCTCAAGTACCTCCAGGTGACAAAATGTGAAATGCTAGAGGTGATATCGATAGATGCTCCCAAACTCTCCTCTTTTATCTATGGGGATGTCGGAATACAAATCTCTCTTGGAGATCCACTGCAAGTCAAAGACATACGTCTGATGGGTTACAACCAACCCAACACAGTCTGTTTTGCTCGTACTGAGCTTCCATCCATTATGCCAAATGTTGAATCACTTATTGTGTCATCTACTGATGAGGTAAAGCAGCGATGTGAAAGGCGTGATTCGATTCTTGATGGAGAACATACGAATTTGAGGCAAATTCTGCACCCCAGACATGCCAACCTCCAGAATGTGACAATCACTGGCTTTAACTCTACAAAGAGCATGATTGAGCTAACAAGTCACATTCTTGAGAATGCACCATCGCTTAAGTGCATTACGCTGGATACAGCCAACTTCTATGATAAGAACCTTTTGACGATGGGTGAATGCTTGCCTATGAGGAAAGGAGGAATCTTGGAAGCACGGAAAGCTTTTGATGCAGCCAAAAGATACATCGCGGGGAAAGTACCGGCGCATGTTGAGTATAAGTTTCTGGAACCCTGCAGGAAATGTCATATTGGGTATTGA</cdnaseq>

Protein Sequence

<aaseq>METRATECRTMQLLHKLDTSSKIIYAPRQQDDIYAGIMPELPLDKLPEDILHHVYSLMPLKDAARAACVSHGFLRCWRRYPILVLNSKTIGLAKRKLSLYAEDVPLYEPALKVDDMESYAISKIDHIINNHSGIGVKVFKLQLFACPNIDAAVLDKWFVHVIKAGIKELSLEMSLCKKRTEYNFPCSILSSKAGGGTIQSLFLSSCSFHPTVALGCNISLTSLHLYEVHISGEEIGQFLSNSFALERLVISDCNDIIQFKVPCLMQQLKYLQVTKCEMLEVISIDAPKLSSFIYGDVGIQISLGDPLQVKDIRLMGYNQPNTVCFARTELPSIMPNVESLIVSSTDEVKQRCERRDSILDGEHTNLRQILHPRHANLQNVTITGFNSTKSMIELTSHILENAPSLKCITLDTANFYDKNLLTMGECLPMRKGGILEARKAFDAAKRYIAGKVPAHVEYKFLEPCRKCHIGY</aaseq>

Gene Sequence

<dnaseqindica>1..43#626..726#1407..2303#2941..3315#ATGGAGACCCGTGCCACCGAGTGCAGGACGATGCAGCTCCTCCGTGAGCTTCAAACAAGTATATGCTTCCCCCGCCCCCTCAGCTTTCGATCCACCTTCCTATACAGAGATCGTCGTTGGATTCTACCGCTATCGTTTATTGCATACTTATTACTACCTCCATATTTTAATATTTTAATGTATGGCGCCGTTGACTTTTTATCCAACGTTTGACCATTCGTCTTATTTAAAAAAATTATGTAATTATTATTTATTTTATTGTGACTTGATTCATCATCAAATGTTCTTTAAGCATGACATAAATATTTTTATATTTGTACAAAAATTTTGAATAAAACGAATGGTCAAATGTTGGTCAAAAAGTTAACAGCGTCATACATTAAAATACGGAGGGAGTATGTTTTAGAAGAAAAACTGCTCTTAGGCTCCTTCTTAACCTGATTGGTTCTTCAGCTAGCTTATAATAAAGTGCAATTTAGACAGGGGAATTGTTAACTCTTATCTGGTCTAGTGCTCAAATCTTCACCTTATTTTGGTTTATGCAAATTAGTGGTTCTTGTCTGTAAGCCTTGAATTGCATTAGCAAATTCATTCTCTAACCTTTTGTTTCTATCTCTATCTCTAGACAAATTGGACACATCTTCAAAGATAATTTACGCTCCGCGGCAGCAAGATGATATTTATGCGGGCATAATGCCAGAACTCCCGCTCGATAAACTTCCGGAGGTATGGATTGCTAATAATGTCATAGTCTGTTAACTACTACAGTATCATTGAAACTGCTATGTTTTGGTGTGCTTGGATTGTAATATTTTTTTTCTCAAGGGGTAGATTGTAGGAATCGGTGTTAAACAACAATGTTTTAGCAAACTATCTCAATGAGGTTTCAGAATGTTGTGCATAAATTGAATTCGAATGCACTGTTACTTTTTAATGTTTGGCTTTCTCTGCACATTGTCTACTACTCCATGCTCCAAAATTATCATTGTTGTGGTCTTTTCAAAACTACTAGCAGAACAATTAACTATTACCAGATTACTTCTGTAGCATTAGCTAATTTGTTATCTCCCGATATGAGCTTTACCTATCATGAAGATGACCTGTGATGCTATTTTTTGTGGATTGATGACATATAAGGACTAAGGAGTACCGTGTGTTATGAAGTTTGGTTAAATGCCCCAATGAGAAAAATGTATATCCACTTATAAGTCTTTTGGTACCGCATATAGGGAAATTTAAGAAAAAGCACTTGACCTGTTGGCCACTGTCCACTAGTAACAATTTAAGTATATTTTACTAAGCAGCTGGTCCTTCTGTTTGTTCTAAGTCCTTCTGTTTGTTCTAAGTGAAGTGTGCATTGCTAGTACTCTCTGAATGCTGAATTATTCAAACATGTTTTTTTCCAGGATATCTTGCATCATGTATATTCTCTAATGCCATTGAAAGATGCCGCTCGTGCTGCTTGTGTGTCGCATGGATTTCTACGTTGCTGGAGACGCTATCCAATCCTTGTATTAAATAGCAAAACAATAGGTTTGGCTAAGAGAAAACTTAGTTTGTATGCGGAAGATGTGCCATTGTATGAGCCAGCGCTTAAAGTGGATGACATGGAAAGCTATGCCATCAGTAAAATTGACCATATTATTAATAACCACTCTGGCATTGGGGTCAAAGTGTTTAAACTTCAACTGTTTGCCTGTCCGAACATAGATGCTGCTGTTCTTGACAAATGGTTTGTACATGTTATCAAAGCTGGGATCAAAGAACTCTCCTTGGAGATGTCTTTATGCAAAAAAAGGACAGAATACAACTTCCCATGTTCCATTCTATCAAGTAAGGCAGGTGGAGGGACAATTCAGTCACTTTTCCTCTCCTCTTGTTCTTTTCATCCTACAGTGGCTCTAGGTTGCAACATAAGCTTGACAAGCTTACATTTATATGAAGTTCATATTTCTGGGGAGGAGATAGGGCAGTTCCTTTCCAATTCATTCGCTTTGGAGAGATTGGTAATTTCTGATTGCAATGACATAATCCAGTTTAAGGTACCTTGCCTGATGCAGCAGCTCAAGTACCTCCAGGTGACAAAATGTGAAATGCTAGAGGTGATATCGATAGATGCTCCCAAACTCTCCTCTTTTATCTATGGGGATGTCGGAATACAAATCTCTCTTGGAGATCCACTGCAAGTCAAAGACATACGTCTGATGGGTTACAACCAACCCAACACAGTCTGTTTTGCTCGTACTGAGCTTCCATCCATTATGCCAAATGTTGAATCACTTATTGTGTCATCTACTGATGAGGTATGCATTATTGTTTTCTATGCACTATCCAGTTGCTTTGTAACTACAATTAATTACAGGCTGGTCATATGCATGTTATAGGTGCACATGAAACATATGATTAATCCTAAGTCATCTCTTCTTTTCTTTCAGATGATCAGTACACCAATGGTGCCCATCAAGTTCCTCCACCTCAAGTTATTGGAAATTTATCTTGCTGAATTACTGGCTTTTCTCCCAACTATGATTTCTTTTCTCTGGTTTCTTTCTTGGATGGTTCCCCTGCCTTGGAGACTTTCATCTTGCATGTATGTCACTTTGGCATAAAAATTCAGTTGATGCTTGTAGTTTGGGGACTTCTGCAAATTTGGCAGGATAAATTGGTTTAGTTTGCTGTAGTTATTCTTCATATGGTTTCTCTCAACAGATTATAGATAGGGGCTGAATCAGCAGTTTAGCACTTAAATACGCACTAAGGCAACCAATTAGAAAAGCCCTGTGGTGCTTCATGGGTATTATTGCACTAGAAGCCAACAGCACCAATTCAGTGTGGGCTTATCATGATAAATTGTTTTAAGCTTATATATTCATCACTAGTGATCGCACTTGCTGAGGAGGATATGACCAAGGTTTACTGAGCAACTATTATCCTTTGCAGGTAAAGCAGCGATGTGAAAGGCGTGATTCGATTCTTGATGGAGAACATACGAATTTGAGGCAAATTCTGCACCCCAGACATGCCAACCTCCAGAATGTGACAATCACTGGCTTTAACTCTACAAAGAGCATGATTGAGCTAACAAGTCACATTCTTGAGAATGCACCATCGCTTAAGTGCATTACGCTGGATACAGCCAACTTCTATGATAAGAACCTTTTGACGATGGGTGAATGCTTGCCTATGAGGAAAGGAGGAATCTTGGAAGCACGGAAAGCTTTTGATGCAGCCAAAAGATACATCGCGGGGAAAGTACCGGCGCATGTTGAGTATAAGTTTCTGGAACCCTGCAGGAAATGTCATATTGGGTATTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA014306