Os12g0613250

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Revision as of 10:37, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os12g0613250| Description = BTB domain containing protein| Version = NM_001190130.1 GI:297729390 GeneID:9272048| Length = 4841 bp| Definition =...")
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Gene Name

Os12g0613250

Description

BTB domain containing protein

Version

NM_001190130.1 GI:297729390 GeneID:9272048

Length

4841 bp

Definition

Oryza sativa Japonica Group Os12g0613250, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:26204023..26208863

Sequence Coding Region

26205687..26206913,26207207..26207276,26208673..26208731

Expression

GEO Profiles:Os12g0613250

Genome Context

<gbrowseImage1> name=NC_008405:26204023..26208863 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:26204023..26208863 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggttccatgaagctaagctccaagccggatgcattcacaaggcgagggcaagcatggtactgcacaacagggcttcccagcgatgttcttgttgaggttggggagatgtctttccaccttcacaagttccccctgctttcaaagagtgccatcctgggaagattgattgaggagaattcagacagcgatgaatgtgtcatcatattgtctgacatccctggtggcgcaaaatcattcgagttagtggcaaggttctgttatgggctgaagatagagctgtcttcagaaaatgtcgtctacctacgctgcgctgctgaacatcttgagatgacagaagaaacatctggggataatctgattaatcagacagagtcattctttaaccaagtagtcctccgaagctggaaagattccctggaagcgcttcggacatgtgatggccttctccctcatgctgaagaccttcacattgtgaagagatgcatcgaatcattggctggcaaagctagcatcgatccggacctcttcggctggccagtctcggaacatagtaccatgcaaagccccgggggaagtgtcttgtggaatggcataagcacgggtgcgaaggttaggaactgcagttcggactggtggtatgatgatgcttcctccctgagcttccctacatacaagaggcttatttcttccatggagtcaagaggcatcaaacaggagatcattgcgggttcgctcacatactacgccaagaagtttctcccagggttgaataggcgtcaaagcaccggaccaatgcccctgccggctgctaccctgtctgatgaagaacagaggcgcctgcttgaagagattgataggatgttgccacttcagagaggtttaatatccacaaatgttttgctctggctgctccggaccgccatgatcctgaaagtcgaccgcgcttgcatttcaaacttggagaaaagggtcgggatgcagctggacgaagccacattggaggatctactgctgccaaacttctcatacaccatggacacgctctacaacgtcgagtgcgttcacaggattctcgaccacttcttggcaatggatcagaccatgggtggcggtggcgcctccccatgcttggatgatgtgatggcatctccttcgttggcaccgatcaccgctgtcgcgaagctgattgatggctaccttgcagagattgcacctgatatcaacctaaagccactgaaattccagtctctggcagctgttttacctgaatatgctcggccactggatgacggtctttaccgcgccattgatgtatacctgaaggtacactttcgagccgctattcttgcataa</cdnaseq>

Protein Sequence

<aaseq>MGSMKLSSKPDAFTRRGQAWYCTTGLPSDVLVEVGEMSFHLHKF PLLSKSAILGRLIEENSDSDECVIILSDIPGGAKSFELVARFCYGLKIELSSENVVYL RCAAEHLEMTEETSGDNLINQTESFFNQVVLRSWKDSLEALRTCDGLLPHAEDLHIVK RCIESLAGKASIDPDLFGWPVSEHSTMQSPGGSVLWNGISTGAKVRNCSSDWWYDDAS SLSFPTYKRLISSMESRGIKQEIIAGSLTYYAKKFLPGLNRRQSTGPMPLPAATLSDE EQRRLLEEIDRMLPLQRGLISTNVLLWLLRTAMILKVDRACISNLEKRVGMQLDEATL EDLLLPNFSYTMDTLYNVECVHRILDHFLAMDQTMGGGGASPCLDDVMASPSLAPITA VAKLIDGYLAEIAPDINLKPLKFQSLAAVLPEYARPLDDGLYRAIDVYLKVHFRAAIL A</aaseq>

Gene Sequence

<dnaseqindica>1951..3177#1588..1657#133..191#tttggagtgaagtgaagtggagtgtactctgttcttgtgtgctctcttggtgtgtgtgtgtgtggtggctcttcctcttctcctctccggagagagagagagagagagaggcagcctagatccatttgcaggatgggttccatgaagctaagctccaagccggatgcattcacaaggcgagggcaagcatggtacggtttttctctttgctctctctctctctctgttacaggttcagtttggtttttgtttagggttagtgtcatgtatggatgcttcttggccggataaagaattggtaaatttgatggtcttgtcttcttcttcttgttgtggttagtttgttgggggtgaattaaggaaaaagaacacatttttatggggatttgggaggatagaaatggaaggttgtttccccccttgtttcttgatctagtttatgtgtctaatctggtgtgagtgagcagcttatgctgcttcaatgtgcacattgtgatacttgccaaacaatttgtttgtgttgcttttgaaagctatggggatttcccattctacttttgtgcatttttcctgtcattggtttaccactttagtacctattgtgtccatgagggaggagctcaagatctttggagtaattcaaatctacttactgaaatttgcttgtcaaaattagtttttataggtgtgttggaagttacagatgccatacatgatacatttgcgcgaatgtttgtcaaatgtgaccctctagttgttttaagaaaagacgcttcagtgaataaactgctaaattttaggcataaggacattgtgaagctccagaatttacgagcaatacttatgtcgcatcttgttcacaagtcagatgcctcaagactcatgcctatgctcacctacatacttttttttcgataatggaagctttggggcacctacatactaatcactgatgaactgtgtggttaatattaaatgtaagaaggatttaactattccatcaataacgaagataaggttgactgttttgagtatgtagtgttaaaatgcttggggagggttcctttgtgtctcttgtgcatcatattagtcaaagattctggattttcaaactaatctatcggttcaagttgcattatactcacatgtgccagccaataagctagtatgctggtaggctgatagcacatatttcggtatggtgcatgaaaaatatagtaatatacacgtgacatgatacctcactctgatctcaattggatggttgtacattttttgttgggaaaagatagtgcaagtatctcagtttgaatagtttattgttagcctgcagcaatgttctgattctaatctactggcttatgcaggagctgtactggtttgtttaattaattcatcagcaatctgtatcaaaatatttagcacaatcactctgttttccttttttttttaacaatctatagtttcttaaaagaatctttacaccactgtagcaaatgcattttctcacttggttaacttagactgtatgaggtaaacgattaatgattcgttttactaatcgtcttcttcttgtgatcatcataggtactgcacaacagggcttcccagcgatgttcttgttgaggttggggagatgtctttccaccttcacaaggtaaattgctacacattgtaaatttgtagatgcatgaagcaatatgtacaactttgcttgtgattatggagaattttgaagaaatgagctttaatgaacaaccacaacttactttttgcacccccagttactcaagaaactttgatgaaagttattcttacagtcacagttactggctgattctcaagaggggcaaaaatgcttttataagtgatttttttcctctgtacttggtatgaacttgagatttgaaaatttgtcctttcctctaattgttctttatctgcttgcagttccccctgctttcaaagagtgccatcctgggaagattgattgaggagaattcagacagcgatgaatgtgtcatcatattgtctgacatccctggtggcgcaaaatcattcgagttagtggcaaggttctgttatgggctgaagatagagctgtcttcagaaaatgtcgtctacctacgctgcgctgctgaacatcttgagatgacagaagaaacatctggggataatctgattaatcagacagagtcattctttaaccaagtagtcctccgaagctggaaagattccctggaagcgcttcggacatgtgatggccttctccctcatgctgaagaccttcacattgtgaagagatgcatcgaatcattggctggcaaagctagcatcgatccggacctcttcggctggccagtctcggaacatagtaccatgcaaagccccgggggaagtgtcttgtggaatggcataagcacgggtgcgaaggttaggaactgcagttcggactggtggtatgatgatgcttcctccctgagcttccctacatacaagaggcttatttcttccatggagtcaagaggcatcaaacaggagatcattgcgggttcgctcacatactacgccaagaagtttctcccagggttgaataggcgtcaaagcaccggaccaatgcccctgccggctgctaccctgtctgatgaagaacagaggcgcctgcttgaagagattgataggatgttgccacttcagagaggtttaatatccacaaatgttttgctctggctgctccggaccgccatgatcctgaaagtcgaccgcgcttgcatttcaaacttggagaaaagggtcgggatgcagctggacgaagccacattggaggatctactgctgccaaacttctcatacaccatggacacgctctacaacgtcgagtgcgttcacaggattctcgaccacttcttggcaatggatcagaccatgggtggcggtggcgcctccccatgcttggatgatgtgatggcatctccttcgttggcaccgatcaccgctgtcgcgaagctgattgatggctaccttgcagagattgcacctgatatcaacctaaagccactgaaattccagtctctggcagctgttttacctgaatatgctcggccactggatgacggtctttaccgcgccattgatgtatacctgaaggtacactttcgagccgctattcttgcataaaaaatgccattgcgcgatttcatcctcttcatatgaatgaaagctatagtttctgaatctgatacttctccagtagtccagtgacaaaatgacactctatgtcactgtgtatactatcatcgaattcgcgatagaagttcttgagctgacaattgatcatatcatcataccgaaaagccatgtgccaagtgctaacatgagttcttcagacaagtcatcatttgcacttgtttccattctttcatacctgaaacccacatgaaaattgccatcctcactgtcttgattcttgaacaacgatggcgctgatgtgttcgcttcctctttttttttttttggcagtcgcatccttctgagcccgctattcttgtgtcaaaaacgctattacatggtttcctcctctttatatgaatgaaagctatatctcttgaatccgatacttttctccaaaggcaaaaaatgacactctatatcactatgtgtatactattaccgaattcgcgatagaggttcttgattacagttgatcatatcatatcatactgaaagccatgtgctaagtgctaacataaattcttcagacaagtcatcatttgcatttgtttacacctgaaactagccacacacacaaattgtcagtttgtcatccacactgtcttgattctggatttcttgaacaacaatggcgctgatgttgtttgcttccatttttttttgttggcagtcgcatccgacgctgcctgaagctgaacgggagcagctatgccggctgatcgactgccagaagctgtcgctggaggcgtgcacccacgccgcgcagaacgagcggctgccgctgcgggtggtggtgcaggtgctcttcttcgagcagctgcagctgaggacgtcggtggccggctgcctgctcgtctccgacaacctggaggcctcgtcgaggacgctccgcggcggcggcgcggtggcggcgtccggcgaggccgggtgctgggccacggccgccgtgagggagaaccaggcgctccgggtcggcatggacagcatgcggctgcggctgatggagctcgagcgggagtgctccgacatgcgccaggacatccgcaagctcggccgcggccgccgccgcctccgtggcggtggtggcatcgtcgccggtggcaaggacggcggcgggtgggcagcgcgggtgcagcggatgctgacgccgaggatgatgaagctgcagatgtgcagcgcgcagcatgacgccgccgagcagcagcggatgaacaatgagcacaagaaggtggagaaggtggccaagaacaagaagcagctgtccatggacgacggtgacgacgaggaggaggcctgaaacctgaaagatttcttcttcttcttgttgttgctgcgccatgatcgtgttggtcaaggtgaagtgtcactgagccgaagagggaagagattgatggcgtcatcagtttgtagttagtaaaagtataagtaactctttgagttgactaagtgactagtgagagcgagtgatttacctgtgagactgtgaatgacttctcatctctcaatctttgactctttttctcctgaaagcgtgcatgcagggagtacacagttcttcatttcgaatgactcccattcttattctcccaaattcagatactgcagtatcc</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0613250, RefSeq:Os12g0613250