BGIOSGA014348

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Revision as of 03:56, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA014348| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA014348, complete gene.| tag = OS04G06...")
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Gene Name

BGIOSGA014348

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA014348, complete gene.

LocusTag

OS04G0616200

Ensembl Transcript ID

BGIOSGA014348-TA

Ensembl Protein ID

BGIOSGA014348-PA

Length

6080

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:30247062..30253141

Sequence Coding Region

30253010..30253141,30252488..30252558,30252312..30252383,30251958..30252029,30251772..30251843
,30251347..30251418,30251032..30251106,30250884..30250955,30250402..30250446
,30250209..30250273,30249692..30250098,30249425..30249623,30248775..30248849
,30248571..30248689,30248134..30248344,30247823..30248054,30247584..30247734
,30247062..30247454

Genome Context

<gbrowseImage1> name=IndicaChromosome04:30247062..30253141 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:30247062..30253141 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCCGCCCTATCGCCGGAGATTTGGCTGGCCGGCGGCCGTCGTCGCCGGCCGCGTGCCGATGCTCGTGGGCCTGGAGGAGACCGTTGCTGGCGTTGCGGAGTTCGAGCGCCATGGCGCCTCGGAGCCAGCGGGACTTCAGAAGAATTATTTCACCGGGCCATTACCAGCGTTCATCGGAGAACTGACTGCTCTCAAGTACATTACTGTGGGCATCAATGCGTTGTCTGGACCTATCCCCAAGGAGCTTGGCAATCTTACAAATCTTGTATCGCTGGCATTGGGCTCAAATAATTTTAATGGATCACTTCCCGATGAGCTGGGTAAATTGACAAAACTTCAACAGCTGTACATTGATAGTAACGACTTCAGTGGTCCTCTACCAACGACTTTATCACAACTTACGAACCTGTCCACCTTGAGGCTCCAAGGGAACTCTTTTCAAGGTCCTATTCCTAGAAGCTTATATAATCTTGTCAAGTTGAGAAGCTTTGTCTTGAGAAACAGCAGGATTTCTGATTCACTTGCATCAGTGGACTTCTCCAAGTTTGGAAGTTTAAATCTACTGGATTTGAGTTTTAACAATATCACAGGTCAAATTCCTCCGTCAATCGTGAATCTTCCTTCTCTTACTTTTCTGAATTTGGTGGCAAATGACTTTGTGATTGATGGCACTGATATGAGTGGTCTGCCATGGGGATTGAATTGTCTTCAGCGGAATACCCCCTGTTTTCTCGGTTCTCCGAAGTCTGCCTCTTTCGCGGTGGACTGTGGTGGTAGTAGAACCATATCAGGCTCAGATAATGCCATGTATCAGGCTGATAACGCCAATCTTGGTGCTGCATCATACTATGTGGCAGGCACACCTACGTGGGGTGTTAGCACCACTGGAAGATTCATGGATCCACCCAATGGAAGTTACATAATCTACAGTTCACGCCAGTTCGATAATACACTAGATTCTGGACTGTTCCAAACAGCAAGGATGTCACCATCATCTTTGAGATACTATGGCATTGGACTCGAGAATGGGAACTACACTGTAACACTTCAATTTGCCGAGGTGGATTTCCCTGATGTGCAGTCTTGGAGGAGCAGAGGGAGGAGGATTTTTGACATCTACATTCAGGTGGCCTGCAAACTTACAATTTCTCTGGGGGAGCGTAAGGAGCAGAACTTTGACATAAGAAAGGCAGCAGGAGGGAAATCTTTCACTGTTGTTAAGAAGCAGTATGTTGTCCCTGTGACAAAAAATTTCCTTGAGATTCATCTCTTCTGGGCTGGCAAGGGTACTTGCTGCATTCCTCATCAAGGCTACTATGGGCCTGCAATATCAGCTTTGAGCGCTACTCCAATTTTTGCATTGGCTGCACTTGCTGGACACTTTATATGGAGACAGAAGAAGAGAAAGATATTATTGGAGCTAGAAGAGCTGTACAACATAGTTGGAAGACCAAATGTCTTCAGTTATAATGAGCTAAGGTCAGCTACGGAAAATTTTAGTTCTAGTAACCTACTTGGTGAAGGAGGATATGGATTGGTTCACAAGGGTAGATTAAGTGATGGAAGGGCGGTGGCAGTGAAGCAGCTCTCTCAGTCATCTAATCAGGGGAAAAAGCAATTTGCTACAGAAATCGAAACTATATCTCGAGTACAACACTGTAACCTCGTGACATTGTATGGTTGCTGCCTTGAGAGCAATACGCCGCTGTTGGTTTATGAGTATCTGGAGAATGGAAGCCTTGACCAAGCACTGTTTGGAAAGGGAAGCTTGAACCTGGATTGGCCAACAAGATTTGAGATATGCTTAGGCCTAGCAAGAGGTATAGCTTATCTTCACGAGGATTCTACCGTCCGCATCGTGCACAGGGACATAAAGGCCAGTAATGTCTTGCTAGATGCCGGTCTCAACCCTAAGATTTCAGATTTTGGGCTTGCCAAGCTCTATGATAACAAGAAAACTCACGTCAGCACAAAAGTTGCTGGCACATTTGGCTACCTTGCACCTGAGTATGCCATGAGAGGTCATATGACTGAGAAAGTTGATGTGTTTGCATTCGGCGTGGTCGCGTTGGAGACTGTTGCTGGTGAATCAAACTACCAGAATACACTTGAGGAAGACAGAACTTACATATTTGAAAGGGTCTGGGAGCTGTATGAAAACGGGCACCCGCTCGACTTCGTGGACCCAAAACTCTCGGAATTCAACAGCGAGGAGGTGATCAGAGTCATCCGTGTCGCCCTCCTCTGCACACAGGGCTCCCCTCACAAGCGGCCGCCAATGTCGAAGGTAGTCTCCATGCTCACCGGAGACGCCGACATAACCGAAGATGCCGCAAAGCCGAGCTACATCACGGAGTGGCAGATCAAGGTCGGGAGCTGCCACCACACGGGCAGCAGCCAGGTCGGCTCGGCGTCGACGCCGCCGTCCTCCGGTGATGGCGGCGCCGGCCAGGCGAGTAGCCAGGGCGCAGGGGAAGGCAGCCCGCTGACTCCCTCGCCATTGTTCACCTCCATCATCGACGAGGGCAGGTGA</cdnaseq>

Protein Sequence

<aaseq>MPPYRRRFGWPAAVVAGRVPMLVGLEETVAGVAEFERHGASEPAGLQKNYFTGPLPAFIGELTALKYITVGINALSGPIPKELGNLTNLVSLALGSNNFNGSLPDELGKLTKLQQLYIDSNDFSGPLPTTLSQLTNLSTLRLQGNSFQGPIPRSLYNLVKLRSFVLRNSRISDSLASVDFSKFGSLNLLDLSFNNITGQIPPSIVNLPSLTFLNLVANDFVIDGTDMSGLPWGLNCLQRNTPCFLGSPKSASFAVDCGGSRTISGSDNAMYQADNANLGAASYYVAGTPTWGVSTTGRFMDPPNGSYIIYSSRQFDNTLDSGLFQTARMSPSSLRYYGIGLENGNYTVTLQFAEVDFPDVQSWRSRGRRIFDIYIQVACKLTISLGERKEQNFDIRKAAGGKSFTVVKKQYVVPVTKNFLEIHLFWAGKGTCCIPHQGYYGPAISALSATPIFALAALAGHFIWRQKKRKILLELEELYNIVGRPNVFSYNELRSATENFSSSNLLGEGGYGLVHKGRLSDGRAVAVKQLSQSSNQGKKQFATEIETISRVQHCNLVTLYGCCLESNTPLLVYEYLENGSLDQALFGKGSLNLDWPTRFEICLGLARGIAYLHEDSTVRIVHRDIKASNVLLDAGLNPKISDFGLAKLYDNKKTHVSTKVAGTFGYLAPEYAMRGHMTEKVDVFAFGVVALETVAGESNYQNTLEEDRTYIFERVWELYENGHPLDFVDPKLSEFNSEEVIRVIRVALLCTQGSPHKRPPMSKVVSMLTGDADITEDAAKPSYITEWQIKVGSCHHTGSSQVGSASTPPSSGDGGAGQASSQGAGEGSPLTPSPLFTSIIDEGR</aaseq>

Gene Sequence

<dnaseqindica>1..132#584..654#759..830#1113..1184#1299..1370#1724..1795#2036..2110#2187..2258#2696..2740#2869..2933#3044..3450#3519..3717#4293..4367#4453..4571#4798..5008#5088..5319#5408..5558#5688..6080#ATGCCGCCCTATCGCCGGAGATTTGGCTGGCCGGCGGCCGTCGTCGCCGGCCGCGTGCCGATGCTCGTGGGCCTGGAGGAGACCGTTGCTGGCGTTGCGGAGTTCGAGCGCCATGGCGCCTCGGAGCCAGCGGTGCGCTGGGACGTGCGGCTGCGTCGAGATCGCGGAGGTGATGATGGATTGATGGTGTTCGATCTTATTCCCAATCCAATCCGTTTTGGGATCGTATTAGGAGCAGATTAGCCAGTGTCCTCCATTGCGATTGTTGGCCTTGCTCCTGCGACCACCACATTCTCGCGCTCCCCAATTTTGTCTGTTTGAACTTTGATGTTTGGTTCGTCAGTTTTTTTTTTTTGGGTGTTTTGGTTCGTCAGTTAATTAGGTCAGCATCGAGTTATGATGTTCGGTTCGTCAGTTTATGATAGGTCGTCATCGAGTTCTACTTGGGGATGAACACTGCATATCAGTAGCTACTAGCTAGCTGAGTTTGTGAACAGCTTGGGAAAACCAAAGCTTGTAGGATGTATAAGATGTGACTGATGTGTGTAACTAACGTCGCTGGTATCTGGTATTGTGATTTCAGGGACTTCAGAAGAATTATTTCACCGGGCCATTACCAGCGTTCATCGGAGAACTGACTGCTCTCAAGTACATGTAAGAGTTACAGCTCATAGTATAATTATTTGCTCTTTACATTTCAATTTTCTTGTCTTGCTTTCAACACCAATCCTACATTCTTTTTCCTTGAAAATCAACAGTACTGTGGGCATCAATGCGTTGTCTGGACCTATCCCCAAGGAGCTTGGCAATCTTACAAATCTTGTATCGCTGTAAGCTTCAATCTTGCTGTTCTGAACTTCTGATAAGCAGTAAGCTTTTTTAATAGGGTAACACTCCAACATAGTTGGCGAATGTAGCAATGAATTTTATTTTTGTTAATGTGTCTTTCCATTCGTGAAAAAAATTGAAATCTATATCGTGGAAGAGGGAGCCTGACACAATAATATGCCTTTCTCATCATATATTAACCAACCTTTTTTTAAAAAAAAAAATCAGCACTTCCTTGTGAATATTTTCCTGGAGCTAACCTATTTAAAATCTTATACTCTCAGGGCATTGGGCTCAAATAATTTTAATGGATCACTTCCCGATGAGCTGGGTAAATTGACAAAACTTCAACAGCTGTAAGTTATCCGTTTGGTCTTGTTTTCATTTTATTTTATATGATCATCAGTTTTTGTTTGTTGTTTAGAGGTGATAATCATCTGCTTGAATGAAGTTGTATGTCTGAATTGTAGGTACATTGATAGTAACGACTTCAGTGGTCCTCTACCAACGACTTTATCACAACTTACGAACCTGTCCACCTTGTAATTTCGCAAAGCAGTGTTTGGGATTTTATTGTTTCTCATGAAATTTCAACAAATAATTATGGACACCATTGTCATTGTGCATCCCGCTGGGCATTGGATAATAATTTCACTGGGCAATACCTGATTATCTTGGGAGTTTGACCATCTAACCCAACTGTAAGATCTATCTTTGGCCAATTACCGATATTTAACCCCTTTTTTTTCTAACTGTTCTCTTGGCACAAATAGCAAGGAAATGCTGTGCATGTTTTGCTAGCATGAAATGTTTATGTGAAATGCATCTTGTTTCTCACGAAGAGCTAGAATAGTCCGCGTTGCTTATTTATGACCAAACATATGTCTATTTTTAGGAGGCTCCAAGGGAACTCTTTTCAAGGTCCTATTCCTAGAAGCTTATATAATCTTGTCAAGTTGAGAAGCTTGTAAGTTCCTAGTGTTTCAGTGACAATGACTGTGTTTTTGTTGCAAACATAAGCTTATGGCAGTGATAGAAGCATTGATTGTCCCAATTTAACAGAAGAATAGGGGATATAGTAAATGGAAGCTCTTCACTGGCGTTCATTGGAAGCATGACATCTTTGGGTGATCTGTACGGCACTTTCACACCACTTTACTTCTCGTAACAGTTTAAGATCTTAAGAATTTAACTTTTTGTCTTTCAGTGTCTTGAGAAACAGCAGGATTTCTGATTCACTTGCATCAGTGGACTTCTCCAAGTTTGGAAGTTTAAATCTACTGTAAGAATTTTCACCTATCACAAAAATCTCCGACAAGTTTTCCATGCCGTTGTCTAACTCATTATTGTTGGTGCAGGGATTTGAGTTTTAACAATATCACAGGTCAAATTCCTCCGTCAATCGTGAATCTTCCTTCTCTTACTTTTCTGTAAGTGCTGGTGCAGGGATTCTAACCTTGTTTTTGCAACAATGTTTTTCTTTTTGCTGTGTGCTGATGTTTGCAAATATCTTATTCCAAAACATGTTTGAGTCAGATTTCTTGGGAATAATAGCCTTTCAGGAAGTCTGCCAGCCATGAAAAGTCCTCTGCTTTCAAATTTGTATGTTCATATTTTCCTTGTATGTTCCCATTTTGTTTCAATGATCAAAATATGTATCGATCTAATTCTAAAATATCCCATGTTACTTTTCAGAGATTTTTCATACAACCACCTCTCAGGAAACTTTCCTTCTTGGACTGCCCAGAAAGATTTACAACTGTATGTTTCATGGCTTGAAACTTCTGTATATACCTCTTTACGATTGAATATACAAATTACAAAGACAGAAAAATCTAAAAGTGATATCTGATGTGCATTTTCTAAGGAATTTGGTGGCAAATGACTTTGTGATTGATGGCACTGATATGAGGTACTTGCCAGTTGCTACCATTTTTTTTTTCTTATTAAGACCATTAGCTCCTTTAGGTAAAACACTATATTCATTTCAGCTTGTAAGTTGTAAATAGAATTTAAAATAGTGATGTATTCTATCTGTAGTGGTCTGCCATGGGGATTGAATTGTCTTCAGCGGAATACCCCCTGTTTTCTCGGTTCTCCGAAGTGTAAGCCTTCATCTCTGTAACTTTGTGCATATGCCTACTTCAGAGAATTCAAAACTATAAAATCGTAGTTGCAGATTACTAAGACTTTTGATTTGATATTTTTCCTCCAGCTGCCTCTTTCGCGGTGGACTGTGGTGGTAGTAGAACCATATCAGGCTCAGATAATGCCATGTATCAGGCTGATAACGCCAATCTTGGTGCTGCATCATACTATGTGGCAGGCACACCTACGTGGGGTGTTAGCACCACTGGAAGATTCATGGATCCACCCAATGGAAGTTACATAATCTACAGTTCACGCCAGTTCGATAATACACTAGATTCTGGACTGTTCCAAACAGCAAGGATGTCACCATCATCTTTGAGATACTATGGCATTGGACTCGAGAATGGGAACTACACTGTAACACTTCAATTTGCCGAGGTGGATTTCCCTGATGTGCAGTCTTGGAGGAGCAGAGGGAGGAGGATTTTTGACATCTACATTCAGGTGGCCTGCAAACTTACAATTTCTCTGGTATTTGATGCTTTTAGCTCATTAGCTCTGATCAAAACTATTTTTCTTCATTTTTGTATCTTGTATAGGGGGAGCGTAAGGAGCAGAACTTTGACATAAGAAAGGCAGCAGGAGGGAAATCTTTCACTGTTGTTAAGAAGCAGTATGTTGTCCCTGTGACAAAAAATTTCCTTGAGATTCATCTCTTCTGGGCTGGCAAGGGTACTTGCTGCATTCCTCATCAAGGCTACTATGGGCCTGCAATATCAGCTTTGAGCGCTACTCCAAGTACTGATCTAAACTAGAATTTTTTTTCGTTCTATATTTCTGTTATACTAACTGTTCACAACGCCATTTGGGAGTCATCTAAGATATATCGGTATACCTCTTCTGGTTGAAAAAAAAAATCATCACTGTGACATGCTGATGCATGCTTTGATATTTTCTAAAAAAAAACTTTGGGCAATGATCCACCATGTTTGGTGCTAGAGGTACTTCCATCATGTTTTAAAGATTTAACTGAATATGCAATTCTAAAGTGAATGATCAAAAGCCTCTGTAATGAAGTTAGCAGTCTGTGCCAGCAAAATATTTGGCTATAAGACCAATATATAAATATCCCTCTTAAATTTATGGATGAATTAAGTTGAATGAATATGTTTCAAACGCATATAAATATCAAAACACACATGATCAATGTTTTGTAGTTGTACATATTATTTTTTTTAAGTTTTATTTGAACCTTTTCATGCTCTGACTTAGTTAGCTTTCTCCAGACTTCATCCCAACGGTCCGTAGCCCTGCAGACAACAAGAGCAGGAGCAAAATTGCTGTGATCATTGTAGTTATGGTTGGTGTTGCAGTTTTTGCATTGGCTGCACTTGCTGGACACTTTATATGGAGACAGAAGAAGAGAAAGATATTATTGGAGCTAGAAGGTATTTCATATACCAGTGTCACGTTGTGTGCTTCAACTTGACGTGGAGGTTATGCTAACAAGTTTTGTTGTGATTTAATCTCCAGAGCTGTACAACATAGTTGGAAGACCAAATGTCTTCAGTTATAATGAGCTAAGGTCAGCTACGGAAAATTTTAGTTCTAGTAACCTACTTGGTGAAGGAGGATATGGATTGGTTCACAAGGTCTGTTTGTGTAGTAAATTTCTGGATTTGCATGCCATGTTTGAATTTGGTTGCCGAAAGCAAGTTCGTGGTAATTTAAATATTAGTACACAGGAAAGTCAAAACTCAAGAGATATGCCTTTTATTGTAAACTAGTGCCTTTTCAAGTGCATTCATCGGCATAACTTGTTTAACTCCCTGAATTATGAAATGCCCTGCATAGTTGACAAGTGCAACTTTCTTGCAGGGTAGATTAAGTGATGGAAGGGCGGTGGCAGTGAAGCAGCTCTCTCAGTCATCTAATCAGGGGAAAAAGCAATTTGCTACAGAAATCGAAACTATATCTCGAGTACAACACTGTAACCTCGTGACATTGTATGGTTGCTGCCTTGAGAGCAATACGCCGCTGTTGGTTTATGAGTATCTGGAGAATGGAAGCCTTGACCAAGCACTGTTTGGTATAAGTTTATTTGGTTTTACATGACTTGGAATTTTACTTAAATGCCAAAATTTTAAAACATCAAACTTTATCTTCAGGAAAGGGAAGCTTGAACCTGGATTGGCCAACAAGATTTGAGATATGCTTAGGCCTAGCAAGAGGTATAGCTTATCTTCACGAGGATTCTACCGTCCGCATCGTGCACAGGGACATAAAGGCCAGTAATGTCTTGCTAGATGCCGGTCTCAACCCTAAGATTTCAGATTTTGGGCTTGCCAAGCTCTATGATAACAAGAAAACTCACGTCAGCACAAAAGTTGCTGGCACATTGTAAGTGATCTATCACCTGACTGTTCTATGTTACTGTGCTATTGACGGATATGTTCTAACTGCCATTGGTCGACTTCACTTTGCCCAGTGGCTACCTTGCACCTGAGTATGCCATGAGAGGTCATATGACTGAGAAAGTTGATGTGTTTGCATTCGGCGTGGTCGCGTTGGAGACTGTTGCTGGTGAATCAAACTACCAGAATACACTTGAGGAAGACAGAACTTACATATTTGAAAGGGTAAGGCCAGAATTCATCATCCACAGAGCACCTTGAATTCATCCTTTTCCCCTTTACATTGCAAACCATACATGTCGATACACTGTAAGTCTGTAATGTATAATTTGCTAAAAATTCTCAATGTTTCAGGTCTGGGAGCTGTATGAAAACGGGCACCCGCTCGACTTCGTGGACCCAAAACTCTCGGAATTCAACAGCGAGGAGGTGATCAGAGTCATCCGTGTCGCCCTCCTCTGCACACAGGGCTCCCCTCACAAGCGGCCGCCAATGTCGAAGGTAGTCTCCATGCTCACCGGAGACGCCGACATAACCGAAGATGCCGCAAAGCCGAGCTACATCACGGAGTGGCAGATCAAGGTCGGGAGCTGCCACCACACGGGCAGCAGCCAGGTCGGCTCGGCGTCGACGCCGCCGTCCTCCGGTGATGGCGGCGCCGGCCAGGCGAGTAGCCAGGGCGCAGGGGAAGGCAGCCCGCTGACTCCCTCGCCATTGTTCACCTCCATCATCGACGAGGGCAGGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA014348