BGIOSGA014351

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Revision as of 03:57, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA014351| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA014351, complete gene.| tag = H0525G0...")
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Gene Name

BGIOSGA014351

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA014351, complete gene.

LocusTag

H0525G02.6

Ensembl Transcript ID

BGIOSGA014351-TA

Ensembl Protein ID

BGIOSGA014351-PA

Length

3841

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:30233533..30237373

Sequence Coding Region

30236963..30237373,30236762..30236839,30234337..30236359,30234127..30234251,30233957..30234034
,30233814..30233873,30233533..30233643

Genome Context

<gbrowseImage1> name=IndicaChromosome04:30233533..30237373 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:30233533..30237373 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCCACCGCCTCCACCTCCGGCGACCCCACCGCCGCCGCCGGCGAGCCCACGCCGTCGTCCTCAGCATCCGCGCAGCCACGGCAGCCGGCGTCCCGCATATCCCACATCGTGCGCACCTACCTCGACCTCTCCTCCAACCCCAAGAAGCGCCGCGCCGCTCCCACGAGCCACCCCAAGCCCGCCGCCGCCGCCGCCGGCCAAGGCGCCCCCGATGCCGGAGACGGGAAGGACAGCGGCGGGAAGGCGGCGGTGACCCCATCGTCGGCGGCGCAGCCCACGACCACGCGGCTCCTCCGCGAGCTCGGCGTCCGGGTCTCCCGCTACACGCACGAGGAGCGCCGCGACATCGTCCTCCGCTACATGCAGAAGCGGAGCGGCCGCCAGGGCGTCAAGCGCGCCACCGCAAAGGCCCCATCGAGGCAGGCTCTCGCGGAGCGGCGGCGGCGGGGTGCGAGAGGGCAGTTCCTCGGCAAGGAGGGCGCCAAGACTGTAGATAAACCAGAAGAAGATCCAGAGGTGCCGCCAGAAGTTATTGCTAACGCTGGAGGAGTGCCCATGGTTGGAATGGTTTTCGAGAATGAAGAGAAAGCATATGAGTATTATGCTAGTTATGCTGGAAATATAGGATTCAGTGTTCGAAAAGGATTGTGGGATAAAACGGTGAAAAATGTTGCTAGGTCAAGGGTCTTTGTATGCTCTAGGGAGGGATTTCGCTCAAAGAATGAGGCCAAAAGACCTCGCCCAGAGACTAGGACAGGTTGTCCTGCACGAATAGCTATAAAATTGGTATCCAATGGCAAGTACCGGGTAGCAGAATTTGTGGAAGATCACAATCACCAGCTTGCTGCACCATTTGATATAGATATGCTGAAGTCAGAGAGAGTGTTGACCAAGGTTCAACCAGGAAACCGAAATGCTAGTAACATTCCTCCAGGATGCAAGAATTACATTCGGGCCAAGTCTTCAACACACATGAATTCAGAGGACCTTGGAGCTCTAATGGATTATTTTCGAAGAATGAAGAGTGATAATCCCTCTTTTTACTATGCCATTCAGGTGGATGAAAATGATAAAGCAACAAATGTCTTCTGGGCTGATGCAAGATCAATAGTAGACTATCATTATTTCTGTGATGTGATCTGCTTTGACACAACATACAGATCAAATGACTGCAGAAAACCCTTAGCTTTGTTTTTGGGTATGAACCATCATAGGCAAACAATCATATTTGGCTCTGCTTTTCTGTATGATGAAACTGTTGAATCTTTCAAGTGGCTTCTCGAGACCTTTAAGAGTGCCATGTGTGGGAAACAGCCAAAGACGATATTGACAGATCGATCTGCTGCTTTGAAGGAAGCCCTGAGTCTCACCTGGCCTGGTACAATTCACCGTTCTTGTGTGTGGCAAATATACCAGAATGCTTTTAAGTCCTTAGAACATGTTTTTAATACTCTTGAGGAATTCACACATGATTTTCACCACTGCATGTTTGATATCGAGGATGACCAGGAGTTTGATGAGATATGGAATGTGATAATCAAGAAGTACAGCCTCAAAGGAGAGGAATGGTTAACTAAGTTGTATGAAGATCGGGAAAATTGGGCCTTGCCATATAACCGGCAAATATTCTTTGGGGACATTAAAGGGATGTTACAAGTAGAAACTTCTTGCGTTGGGCTGAGAGAGTTCTTGGATTGTGAGAAAGATCTCTCTAAATTTTTTATGTTCTTTGAAAGCTCAATGGAGAAGAGGAGGCAAGAAGAGATACAAGCTGATTACCAAGCCAGCGAAGGGGCACCAAGAATATCTCTGCCACTGCTATGGCAAGCTGCAAAAGTGTATACACCAATCATCTTTGAGTTATTTAGAAAGGAATATGAACTGTGTATGGACTGTATGGCTTATAGTTGTGGGGAGTTTGGCTCTCTTTCTGAGTACATGATCACTGTTAAGAATAAAACTAAAGACCAGCTTGTGCGGTTTGACTCATCAGATGGCACAGTTGCATGTACTTGTAAAAAATTTGAAAATGCTGGAATATTATGTTGCCATATATTAAAGGTATATGAGCTGAGGAATGTTAAAGAGATCAGGCCGCAGTATTTTCTTAAGAGATGGAGAAAAGATGCAAAGGTGGGGTCCACCGATGAAACTAATAGATTTAATTTTGATAGTGGCACAAAATCTTCTGTTCCAGAACGCTATGCAGCTCTGTGCCGCTCGTTCTACAAGATAGCTGCTAAGGCTGCAGAGAATGCAGAGACATTTGCACTGATGGCAAGCCAATCAGATCGACTTGTTGAAGAAGTAGAACGGATTTTGCAATCTACACTGGCGAATAAGTCATCCGTAGGCCCTTCCATTAAGAACCAGTTAACTAGTATGGTTCAGAATGAATATCTCCTTAATAGTAGCAATGAAGTTGAGAAATCTACTGGAAAGAAGAAGACTGAAGTTTATCGCCATAAAAGTGCTGTGGTAACTAATAAAATGCAGAAAACAAGAAAAGACACAAGGCACCCTGATGAAGCAGCCACTGGAACAAGAGATGGAGAACTGAATATGACACCAGACAACAGGCAGTCAGAAGCAAGGAATTCTCCAAATCAGTTCCTCCCAGATCAATTAATGCAGGGGCATTATATACTTGGTCAGAACTATGGGCTTGGTACCTCAGAGAATCTTCATAACAATTTGAATCAGTTTGGTCAGGCTTCCTCACTTCCAACCATGCAACAGCAGGCATTTCCCGGAAACAATCAATTAACCCAAGGCTATCCTAGTGATATGCATGCACTACAGTTTGTAGGGGCAAATCCCCAGATGGAGCATCAGAATGGTGATCAGGGGCAGTCATCAATACCAGTGTGGGATTTTCTCTGA</cdnaseq>

Protein Sequence

<aaseq>MATASTSGDPTAAAGEPTPSSSASAQPRQPASRISHIVRTYLDLSSNPKKRRAAPTSHPKPAAAAAGQGAPDAGDGKDSGGKAAVTPSSAAQPTTTRLLRELGVRVSRYTHEERRDIVLRYMQKRSGRQGVKRATAKAPSRQALAERRRRGARGQFLGKEGAKTVDKPEEDPEVPPEVIANAGGVPMVGMVFENEEKAYEYYASYAGNIGFSVRKGLWDKTVKNVARSRVFVCSREGFRSKNEAKRPRPETRTGCPARIAIKLVSNGKYRVAEFVEDHNHQLAAPFDIDMLKSERVLTKVQPGNRNASNIPPGCKNYIRAKSSTHMNSEDLGALMDYFRRMKSDNPSFYYAIQVDENDKATNVFWADARSIVDYHYFCDVICFDTTYRSNDCRKPLALFLGMNHHRQTIIFGSAFLYDETVESFKWLLETFKSAMCGKQPKTILTDRSAALKEALSLTWPGTIHRSCVWQIYQNAFKSLEHVFNTLEEFTHDFHHCMFDIEDDQEFDEIWNVIIKKYSLKGEEWLTKLYEDRENWALPYNRQIFFGDIKGMLQVETSCVGLREFLDCEKDLSKFFMFFESSMEKRRQEEIQADYQASEGAPRISLPLLWQAAKVYTPIIFELFRKEYELCMDCMAYSCGEFGSLSEYMITVKNKTKDQLVRFDSSDGTVACTCKKFENAGILCCHILKVYELRNVKEIRPQYFLKRWRKDAKVGSTDETNRFNFDSGTKSSVPERYAALCRSFYKIAAKAAENAETFALMASQSDRLVEEVERILQSTLANKSSVGPSIKNQLTSMVQNEYLLNSSNEVEKSTGKKKTEVYRHKSAVVTNKMQKTRKDTRHPDEAATGTRDGELNMTPDNRQSEARNSPNQFLPDQLMQGHYILGQNYGLGTSENLHNNLNQFGQASSLPTMQQQAFPGNNQLTQGYPSDMHALQFVGANPQMEHQNGDQGQSSIPVWDFL</aaseq>

Gene Sequence

<dnaseqindica>1..411#535..612#1015..3037#3123..3247#3340..3417#3501..3560#3731..3841#ATGGCCACCGCCTCCACCTCCGGCGACCCCACCGCCGCCGCCGGCGAGCCCACGCCGTCGTCCTCAGCATCCGCGCAGCCACGGCAGCCGGCGTCCCGCATATCCCACATCGTGCGCACCTACCTCGACCTCTCCTCCAACCCCAAGAAGCGCCGCGCCGCTCCCACGAGCCACCCCAAGCCCGCCGCCGCCGCCGCCGGCCAAGGCGCCCCCGATGCCGGAGACGGGAAGGACAGCGGCGGGAAGGCGGCGGTGACCCCATCGTCGGCGGCGCAGCCCACGACCACGCGGCTCCTCCGCGAGCTCGGCGTCCGGGTCTCCCGCTACACGCACGAGGAGCGCCGCGACATCGTCCTCCGCTACATGCAGAAGCGGAGCGGCCGCCAGGGCGTCAAGCGCGCCACCGCAAAGGTGAGCTCCTCGATCCATATCATCGCCAAGAAGGAAGAATTCGCGTTTGAGTTTAGGTTAAAGATGGATAGAAATTTGATCATTATTAGTATTATTTTTTGATGGCGCCATTGTTGGCTGCAGGCCCCATCGAGGCAGGCTCTCGCGGAGCGGCGGCGGCGGGGTGCGAGAGGGCAGTTCCTCGGCAAGGAGGGCGCCAAGGTATATAGACCGGGGATCCATGGTTTCTGATTGATTTCTCAGAGAATTGTTTGAGAGATTTCGTGTGTTCCATGTGGCGCATTTCATGGTTGTTTTTTAGATAATGGGAATTTATATAACCCGGCTTCTACACCAACACCAACGGCTTCTGAAAACCCGGCTTTCATGGTTGGATATTGCAAGTGTCAAGTAGGCTAATGTAGATGCGCATTGAGTTCAGCATGTCTTGGAGTTAGTAGCATTGGTGCACAATCATGTCAAATGGAGTCTGATTTTAGGATTTTTACAGAATACCGGTAGGGAAAAACATTCTTGGTACAAATGACCAAGAAGCACTTTGATGCTGTGGTAGATGTATGACATTGTGTATTTGTCTGCACTTACGTTATCGTTTCCTCCCAGACTGTAGATAAACCAGAAGAAGATCCAGAGGTGCCGCCAGAAGTTATTGCTAACGCTGGAGGAGTGCCCATGGTTGGAATGGTTTTCGAGAATGAAGAGAAAGCATATGAGTATTATGCTAGTTATGCTGGAAATATAGGATTCAGTGTTCGAAAAGGATTGTGGGATAAAACGGTGAAAAATGTTGCTAGGTCAAGGGTCTTTGTATGCTCTAGGGAGGGATTTCGCTCAAAGAATGAGGCCAAAAGACCTCGCCCAGAGACTAGGACAGGTTGTCCTGCACGAATAGCTATAAAATTGGTATCCAATGGCAAGTACCGGGTAGCAGAATTTGTGGAAGATCACAATCACCAGCTTGCTGCACCATTTGATATAGATATGCTGAAGTCAGAGAGAGTGTTGACCAAGGTTCAACCAGGAAACCGAAATGCTAGTAACATTCCTCCAGGATGCAAGAATTACATTCGGGCCAAGTCTTCAACACACATGAATTCAGAGGACCTTGGAGCTCTAATGGATTATTTTCGAAGAATGAAGAGTGATAATCCCTCTTTTTACTATGCCATTCAGGTGGATGAAAATGATAAAGCAACAAATGTCTTCTGGGCTGATGCAAGATCAATAGTAGACTATCATTATTTCTGTGATGTGATCTGCTTTGACACAACATACAGATCAAATGACTGCAGAAAACCCTTAGCTTTGTTTTTGGGTATGAACCATCATAGGCAAACAATCATATTTGGCTCTGCTTTTCTGTATGATGAAACTGTTGAATCTTTCAAGTGGCTTCTCGAGACCTTTAAGAGTGCCATGTGTGGGAAACAGCCAAAGACGATATTGACAGATCGATCTGCTGCTTTGAAGGAAGCCCTGAGTCTCACCTGGCCTGGTACAATTCACCGTTCTTGTGTGTGGCAAATATACCAGAATGCTTTTAAGTCCTTAGAACATGTTTTTAATACTCTTGAGGAATTCACACATGATTTTCACCACTGCATGTTTGATATCGAGGATGACCAGGAGTTTGATGAGATATGGAATGTGATAATCAAGAAGTACAGCCTCAAAGGAGAGGAATGGTTAACTAAGTTGTATGAAGATCGGGAAAATTGGGCCTTGCCATATAACCGGCAAATATTCTTTGGGGACATTAAAGGGATGTTACAAGTAGAAACTTCTTGCGTTGGGCTGAGAGAGTTCTTGGATTGTGAGAAAGATCTCTCTAAATTTTTTATGTTCTTTGAAAGCTCAATGGAGAAGAGGAGGCAAGAAGAGATACAAGCTGATTACCAAGCCAGCGAAGGGGCACCAAGAATATCTCTGCCACTGCTATGGCAAGCTGCAAAAGTGTATACACCAATCATCTTTGAGTTATTTAGAAAGGAATATGAACTGTGTATGGACTGTATGGCTTATAGTTGTGGGGAGTTTGGCTCTCTTTCTGAGTACATGATCACTGTTAAGAATAAAACTAAAGACCAGCTTGTGCGGTTTGACTCATCAGATGGCACAGTTGCATGTACTTGTAAAAAATTTGAAAATGCTGGAATATTATGTTGCCATATATTAAAGGTATATGAGCTGAGGAATGTTAAAGAGATCAGGCCGCAGTATTTTCTTAAGAGATGGAGAAAAGATGCAAAGGTGGGGTCCACCGATGAAACTAATAGATTTAATTTTGATAGTGGCACAAAATCTTCTGTTCCAGAACGCTATGCAGCTCTGTGCCGCTCGTTCTACAAGATAGCTGCTAAGGCTGCAGAGAATGCAGAGACATTTGCACTGATGGCAAGCCAATCAGATCGACTTGTTGAAGAAGTAGAACGGATTTTGCAATCTACACTGGCGAATAAGTCATCCGTAGGCCCTTCCATTAAGAACCAGTTAACTAGTATGGTTCAGAATGAATATCTCCTTAATAGTAGCAATGAAGTTGAGAAATCTACTGGAAAGAAGAAGACTGAAGTTTATCGCCATAAAAGTGCTGTGGTAACTAATAAAATGCAGAAAACAAGAAAAGGTGGGACTCCAATTTTTTTGTGGATTTCAAGTTCTAACTGTTTATAATTGCACAATTAAATTTGTAAATTTTCTTTTGTTGCTAGACACAAGGCACCCTGATGAAGCAGCCACTGGAACAAGAGATGGAGAACTGAATATGACACCAGACAACAGGCAGTCAGAAGCAAGGAATTCTCCAAATCAGTTCCTCCCAGATCAATTAATGCAGGTTGATTTTTCTTCAAGACAGTACTTTTTTTCGATGTTCCTTTCATCACTGTGGAACAGTTATTTATTACAGGTGTTGATTTCCTTGTTCAGGGGCATTATATACTTGGTCAGAACTATGGGCTTGGTACCTCAGAGAATCTTCATAACAATTTGAATCAGTTTGGTCAGGTATGTGATCATCTATTACTTTAAAAAATATATCTCATTCTATTGAAGTATCGTATTCATCAGCTTCTTGTGGCTTACTGTAGGCTTCCTCACTTCCAACCATGCAACAGCAGGCATTTCCCGGAAACAATCAATTAACCCAAGTGAGTTATATACTATCGACGTTGTCGAGAAGTTTTATGCCTTTTTTTTCAGCATTTGACATTCTTGTCCACTAATGAAGTAATAGCCTAAGGTCAAAGCTAAGAGTGCAACCATGCTGCAGATTCTATGTAGCCATGTTTGATGAACTGCTATCTACACACTCTTGCAGGGCTATCCTAGTGATATGCATGCACTACAGTTTGTAGGGGCAAATCCCCAGATGGAGCATCAGAATGGTGATCAGGGGCAGTCATCAATACCAGTGTGGGATTTTCTCTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA014351