BGIOSGA014374

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Revision as of 03:57, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA014374| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA014374, complete gene.| tag = H0702G0...")
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Gene Name

BGIOSGA014374

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA014374, complete gene.

LocusTag

H0702G05.12

Ensembl Transcript ID

BGIOSGA014374-TA

Ensembl Protein ID

BGIOSGA014374-PA

Length

4549

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:29787703..29792251

Sequence Coding Region

29791814..29792251,29790088..29791468,29788961..29789211,29788680..29788883,29788502..29788594
,29788323..29788430,29787918..29788253,29787703..29787801

Genome Context

<gbrowseImage1> name=IndicaChromosome04:29787703..29792251 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:29787703..29792251 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGCCAGGGCGCGCTGCGGCGTCGGCGGCGGCGGAGGGAGGCTCGCCGGAGCCGCTGGAGGTGCGGTGCGCGGGGTGCGGGGAGACGCTGGAGGTGGAGCCGGGACTGACGGAGTTCATCTGCCCCGACTGCGCCATGCCGCAGTCGCTGCCCCCGGAGCTCATGCCGCCGCCGCCGCCACGGAGGAAGGCGCTGCCCCTGCCCCGCGGCGCCGCCGACGTCCGCGGCGCGCGGCTCCCCTGCGGCGCCTGCGGGGCGCTGCTCAGCGTGCCCGTCGGGCTGGCGCGCTGCGCCTGCCCCATCTGCGCCGCCGAGCTCGCCGTCGACACCGCGCGGCTCCGGCACTACCTCCTGTCGTCCGCCGCGGTGGAGGGCGCCGTCCCCGTGGTGCCGATCGGCACCTCGTCGCCACCGCCGATCCTCCAAGTCCGGGAGGCGCACGAAGAGCATCCTAATATTGCGAGTCGCACGGGACTCATCCAAGCAGAACCTAACGATCCACTAAATCGTATGGAACAGGGACATACAAAGCGTCCAAATCAGCTTCCGGAGCAGTCAGACCCGTATCGTTCTGATTACATGATGGATGGAGAAGGGATACATGGGGCCAATGAGATTATTAGAAGGCATCATAAGCAGAGAAACAGAGAATCTGTTGGCCGTGGAATCATAAGTGCAGAAAAGACACAAGAAAAGCCTCTGAACCAGTTCAGGCATCAGGCACAAGATCAACATTCTAGCTATGCTTTTCGTATGAAGCAGACACATCTAGATCATAGAGATAGAGTTAATGAAGTACAGGCAGATTCTATTGATCCCACAGTTTTTAGTGAGTCAAGATGCATTGCGCTGATTGATGAGACTACTGCAACGCGTATAAATTGCACAACGGTGCACTCTGTTGGACCCAAACCTATAAATGTAGATAAGAATCAGGCACAGGCTCCCAACTCCAAGCGGATCATACAACAGGCACAAAAACAGCCTTCTTATATTGCAATTTCTCAAGAGAATGCTCAGGATAAGCATGCAGATGGTGTGGTTCATGTCCAGGAAAAGCAATTGAGGACTGCAAGTCAAGTAAACCATAGACAAGAGACATGTGCTCAACTGGACAATCAGACTGTTGCAGGGGATAGCAGTGGGAGAATTAGATGCCCGGAAAAAGAACAATCGGAACCTTTTAGCTGCACAATTCGCAAGAGAAAAACGAAGAGTTTGTTGGCTAATTCAAATTCAGGTCTTGAACTTAGGCGCAGTAAACGTTTGGCCAAAGATTCTCCTGCTGCAAAAGACAAAAAACACAGCAAAAACAAGTCTTTTGAGCAGCAGGTTTCTCAAAATGACCAAGTATCTGCTGCAGTCATGGATACTGAATCAATACACAGGGATCCTGTTGAGAGGCAAGCTGCATCTTCAACTGGCCACATGCCAGCTGCCATCACAGACAGTGAACCATCAGAAAATGAGCCTGATGATCTGTATATGCCTTCTCCAGATCAGAGTTTGTCTAACTCTCCAGATATCGACAGAATCATTAACAGCATATGCCCTAGTTCATCCCCTAGGCATATGACCCCTGAAAAAGTCTCTAATGAGTTTGACAACGTCCAGTTAACTACACCACCACCTTCCGATATCGACATGTCTGATCCTGAGCATTTTGCATGTAACTACGTTCCGCAGGAAGTTAGAAAGGCCCTTGCGAAGCTAAGATCTAGTAATTCATCATTTGAGCGTGCGATGTCACAGGCAAGTTCTGGTGATGTGCATGCATTAAGTGATTCTGAAGATTGCGACGAACGCTGGAATGTTGGTACCAAGAGGAATCAAGGGTGTGGTCGTGGTCGTGGTCTTACACTCTGTCTCAAGGTGTGGAATTTGCCTAAGGGTGTCCGCATTCCAGTGCTATTGAACGCTTCGGGGGAGCCTGTTGGGAAAGAGGCAGGCACCTTATCTACCTTTCTGGGTGCATTAGCACGTGACGGAATATTGGCACCTCTGACACATCAAGATTGGAGACGTGTTCCAGAGAAAAACAAGGATGTGATGTATCATATTGTCAAGCTCAAATTTGACATTGCTCCAGCTGCTGAATTCTGGATCATGAAGTGTATAGGAAGAAAGTGGAAGAGTTGGAAAGCTCTCTTAAAACAAAAACATTATGATACTCATGAAACGGTGGAGGAATGCCTTGCTGATCAAAATCCTCGCGTTCTCAAGGAACAGTGGCAATATTTAGTTGCATATTGGGGTACGGAAAAAGCGAAGGCTGTGAGTAGTCGAAATAAAGCTTGTCGGGCAAATGTAACCGCTACGCATACTGCAGGAACAAAGAGCTTTGCACGGATAATTGAGGAGGAGAAGCAGAAGCGGCCTAACAATGAGGAGCCCACTGCTGCGGATTTGTTCCTATTGACTCATACACACAGAAACGGGAAGCCTATGAAGAAGGAAAAAGCTGATATCATTGCACGAGTCCGTGAACAATCTCATAAGCAAGCCGAATGCTCAGGAAGTGACTCTGCAGCACACAAAGTCGGACTTGAATCCTGCTCCATTGGCCTGCGTGGGAAGAGGGGTCATCGTCGGAAGGCAGTCTTGCAGGCATCCTTCAAGGAAGCTGAGGAGGCTAAAAGAAAGGCTGAAGACGAGGCAGCGACGCTGAGGAAGAAGATGGTGGCAATGGAAGAAAGTCAGAAGAAACTGCAAGAGGATTTGGCGAATATGAAGAGTACAGTTAGTGCTATGCAGAAGACGACGTCAACTGGTGACCTATCGGATGGTCAAACGCAAAACTTTCCACAGGTCCAAAATTCACGAAGCGCTCATGAGATTTTGCAGCCATATCTTGACTACTCTGCACTGTACGATCCTTCTGCCTCCCCTAGTCCACGATTTCGATGA</cdnaseq>

Protein Sequence

<aaseq>MAPGRAAASAAAEGGSPEPLEVRCAGCGETLEVEPGLTEFICPDCAMPQSLPPELMPPPPPRRKALPLPRGAADVRGARLPCGACGALLSVPVGLARCACPICAAELAVDTARLRHYLLSSAAVEGAVPVVPIGTSSPPPILQVREAHEEHPNIASRTGLIQAEPNDPLNRMEQGHTKRPNQLPEQSDPYRSDYMMDGEGIHGANEIIRRHHKQRNRESVGRGIISAEKTQEKPLNQFRHQAQDQHSSYAFRMKQTHLDHRDRVNEVQADSIDPTVFSESRCIALIDETTATRINCTTVHSVGPKPINVDKNQAQAPNSKRIIQQAQKQPSYIAISQENAQDKHADGVVHVQEKQLRTASQVNHRQETCAQLDNQTVAGDSSGRIRCPEKEQSEPFSCTIRKRKTKSLLANSNSGLELRRSKRLAKDSPAAKDKKHSKNKSFEQQVSQNDQVSAAVMDTESIHRDPVERQAASSTGHMPAAITDSEPSENEPDDLYMPSPDQSLSNSPDIDRIINSICPSSSPRHMTPEKVSNEFDNVQLTTPPPSDIDMSDPEHFACNYVPQEVRKALAKLRSSNSSFERAMSQASSGDVHALSDSEDCDERWNVGTKRNQGCGRGRGLTLCLKVWNLPKGVRIPVLLNASGEPVGKEAGTLSTFLGALARDGILAPLTHQDWRRVPEKNKDVMYHIVKLKFDIAPAAEFWIMKCIGRKWKSWKALLKQKHYDTHETVEECLADQNPRVLKEQWQYLVAYWGTEKAKAVSSRNKACRANVTATHTAGTKSFARIIEEEKQKRPNNEEPTAADLFLLTHTHRNGKPMKKEKADIIARVREQSHKQAECSGSDSAAHKVGLESCSIGLRGKRGHRRKAVLQASFKEAEEAKRKAEDEAATLRKKMVAMEESQKKLQEDLANMKSTVSAMQKTTSTGDLSDGQTQNFPQVQNSRSAHEILQPYLDYSALYDPSASPSPRFR</aaseq>

Gene Sequence

<dnaseqindica>1..438#784..2164#3041..3291#3369..3572#3658..3750#3822..3929#3999..4334#4451..4549#ATGGCGCCAGGGCGCGCTGCGGCGTCGGCGGCGGCGGAGGGAGGCTCGCCGGAGCCGCTGGAGGTGCGGTGCGCGGGGTGCGGGGAGACGCTGGAGGTGGAGCCGGGACTGACGGAGTTCATCTGCCCCGACTGCGCCATGCCGCAGTCGCTGCCCCCGGAGCTCATGCCGCCGCCGCCGCCACGGAGGAAGGCGCTGCCCCTGCCCCGCGGCGCCGCCGACGTCCGCGGCGCGCGGCTCCCCTGCGGCGCCTGCGGGGCGCTGCTCAGCGTGCCCGTCGGGCTGGCGCGCTGCGCCTGCCCCATCTGCGCCGCCGAGCTCGCCGTCGACACCGCGCGGCTCCGGCACTACCTCCTGTCGTCCGCCGCGGTGGAGGGCGCCGTCCCCGTGGTGCCGATCGGCACCTCGTCGCCACCGCCGATCCTCCAAGTCCGGGAGGTACGCTTCCACTCCCGTGTCCTCAATTGAATTGACTCAATTCAATGGCTACCATATCACTTCTTTTTAGAGGAGGTAGAATGGTGTTCAGCAAAGCGATGTACTGTGACTCTATGAGTGATGAAAGTGTTGCTAGAAAGGTTAGGGCAAATGCCCCATTTGATGTTAAAAAACAGTTTGACTACAGCTATGTTTTGTTTCATGATTCCTGGCTTGATTGAGTGAAGCATATTCTCAATTGGAGAAATTATCATGAAGTTGATGCTAAATATTCTCTCCATTGAACTGATATGCTACACTGCTGTCTCTAATAGTGCATTGGTTCGTGTTGATGTTGTAATGCAGGCGCACGAAGAGCATCCTAATATTGCGAGTCGCACGGGACTCATCCAAGCAGAACCTAACGATCCACTAAATCGTATGGAACAGGGACATACAAAGCGTCCAAATCAGCTTCCGGAGCAGTCAGACCCGTATCGTTCTGATTACATGATGGATGGAGAAGGGATACATGGGGCCAATGAGATTATTAGAAGGCATCATAAGCAGAGAAACAGAGAATCTGTTGGCCGTGGAATCATAAGTGCAGAAAAGACACAAGAAAAGCCTCTGAACCAGTTCAGGCATCAGGCACAAGATCAACATTCTAGCTATGCTTTTCGTATGAAGCAGACACATCTAGATCATAGAGATAGAGTTAATGAAGTACAGGCAGATTCTATTGATCCCACAGTTTTTAGTGAGTCAAGATGCATTGCGCTGATTGATGAGACTACTGCAACGCGTATAAATTGCACAACGGTGCACTCTGTTGGACCCAAACCTATAAATGTAGATAAGAATCAGGCACAGGCTCCCAACTCCAAGCGGATCATACAACAGGCACAAAAACAGCCTTCTTATATTGCAATTTCTCAAGAGAATGCTCAGGATAAGCATGCAGATGGTGTGGTTCATGTCCAGGAAAAGCAATTGAGGACTGCAAGTCAAGTAAACCATAGACAAGAGACATGTGCTCAACTGGACAATCAGACTGTTGCAGGGGATAGCAGTGGGAGAATTAGATGCCCGGAAAAAGAACAATCGGAACCTTTTAGCTGCACAATTCGCAAGAGAAAAACGAAGAGTTTGTTGGCTAATTCAAATTCAGGTCTTGAACTTAGGCGCAGTAAACGTTTGGCCAAAGATTCTCCTGCTGCAAAAGACAAAAAACACAGCAAAAACAAGTCTTTTGAGCAGCAGGTTTCTCAAAATGACCAAGTATCTGCTGCAGTCATGGATACTGAATCAATACACAGGGATCCTGTTGAGAGGCAAGCTGCATCTTCAACTGGCCACATGCCAGCTGCCATCACAGACAGTGAACCATCAGAAAATGAGCCTGATGATCTGTATATGCCTTCTCCAGATCAGAGTTTGTCTAACTCTCCAGATATCGACAGAATCATTAACAGCATATGCCCTAGTTCATCCCCTAGGCATATGACCCCTGAAAAAGTCTCTAATGAGTTTGACAACGTCCAGTTAACTACACCACCACCTTCCGATATCGACATGTCTGATCCTGAGCATTTTGCATGTAACTACGTTCCGCAGGAAGTTAGAAAGGCCCTTGCGAAGCTAAGATCTAGTAATTCATCATTTGAGCGTGCGATGTCACAGGCAAGTTCTGGTGATGTGCATGCATTAAGTGATTCTGAAGATTGCGACGAACGCTGGAATGTTGGTAATTCACACTTCTATTGTCCTTCACTCTTATTATTATGTGTTGCACCATGGAGAATAAGTTTTCTTAGAAAGAGATATTTTCTTTGGGATTATGAATCTTATTAAGCAACAACCCATATCCTTTTTAACTCAGTAGGCTATTACGCTTCACTCTTATTATTGTGCCTCACATTAGGGCGAATAAGCCTCCATATAAAGATAAAATATTTTTCTAAGGATGACGAATCTTATTAAGCCCTGGTACATATCCTTTTGAACTCAGTGAGCCATTGTCCTTGCTCTTATTATTGTCTATTTTACACTGATGAGAATAAACCTCCTTATAAAGATAAAATAATTTCATTGGGATTATGAATCTTATTAAGCAATGATGCAAATCCTTTTAAACTCATTAAGCTATTCTCCTTCACTCTTATCCGTTACACTGCTGAGGGTAAACATATCTATAAAGAATTCTTGGGGATTAGAAGTGTTTTCTTTCTTTGGAAATTAGGAGCAGCGATTATGAGTCTTATTAAGCTATAATACATATCATTTTGAACTCAGTAAGCTATCTGCCCATGATTACCATAGTTGGAGGGTTTTTTTTTTATTATTTTTTTTGCATTTTATCCATGCTGAATCCACAGAAGAATGGAGACTCGTGGGTACCGAGAGGAACTTGTCACACTAAAATATTCATTTTCCCATGTAGACCACTAAACATATAATAAATTGGATTTGTTTGAAACAAACTGTTCACACTCCCCTGTTTCATTATCAAATCCTGTTCATTTCCTTATTCATACTCTGTCTATAAAGAACACCACCATTTGACAGCTGTTCTTGTTATGCTCATCTGATTGTCTCATTGTTTTTTTTTCCTTTCAAGCAGGTACCAAGAGGAATCAAGGGTGTGGTCGTGGTCGTGGTCTTACACTCTGTCTCAAGGTGTGGAATTTGCCTAAGGGTGTCCGCATTCCAGTGCTATTGAACGCTTCGGGGGAGCCTGTTGGGAAAGAGGCAGGCACCTTATCTACCTTTCTGGGTGCATTAGCACGTGACGGAATATTGGCACCTCTGACACATCAAGATTGGAGACGTGTTCCAGAGAAAAACAAGGATGTGATGTATCATATTGTCAAGGTATGCAGTTTTATATGGTTACTGCTGCTTTCTGTGCCTTTAGTTTCTTCTCTGACACCCCTTGTTTGTTGATGTAGCTCAAATTTGACATTGCTCCAGCTGCTGAATTCTGGATCATGAAGTGTATAGGAAGAAAGTGGAAGAGTTGGAAAGCTCTCTTAAAACAAAAACATTATGATACTCATGAAACGGTGGAGGAATGCCTTGCTGATCAAAATCCTCGCGTTCTCAAGGAACAGTGGCAATATTTAGTTGCATATTGGGGTACGGAAAAAGCGAAGGTAACACCGACCATTCTATTTTCTTGCCATCTTGTTTGCAATTTGGCAGGCTTGTTAAATGATTGGTAACTTTATCTTTGATCAGGCTGTGAGTAGTCGAAATAAAGCTTGTCGGGCAAATGTAACCGCTACGCATACTGCAGGAACAAAGAGCTTTGCACGGATAATTGAGGAGGAGGTAATTAAAATCCTGTTGCTTTGCTTTCACTATCACCAATGACGTGCTAATTGTATTACCGCATGCAACAGAAGCAGAAGCGGCCTAACAATGAGGAGCCCACTGCTGCGGATTTGTTCCTATTGACTCATACACACAGAAACGGGAAGCCTATGAAGAAGGAAAAAGCTGATATCATTGTGAGACACAAGGAAGTAATTTATACTAATAATTTTCTGGTTGAGATCTGAGTTTTATTTTCCATGCAGGCACGAGTCCGTGAACAATCTCATAAGCAAGCCGAATGCTCAGGAAGTGACTCTGCAGCACACAAAGTCGGACTTGAATCCTGCTCCATTGGCCTGCGTGGGAAGAGGGGTCATCGTCGGAAGGCAGTCTTGCAGGCATCCTTCAAGGAAGCTGAGGAGGCTAAAAGAAAGGCTGAAGACGAGGCAGCGACGCTGAGGAAGAAGATGGTGGCAATGGAAGAAAGTCAGAAGAAACTGCAAGAGGATTTGGCGAATATGAAGAGTACAGTTAGTGCTATGCAGAAGACGACGTCAACTGGTGACCTATCGGATGGTCAAACGCAAAACTTTCCACAGGTAAATGGAGTATCCAGCTATAATCCATTTTGCACCTCCAGAAAGTATCTATCATTGTAACAGCTTATCCCACTGTTTCTGATCCGGAATCCATGCTTCCTCCTCATCCATTCCAGGTCCAAAATTCACGAAGCGCTCATGAGATTTTGCAGCCATATCTTGACTACTCTGCACTGTACGATCCTTCTGCCTCCCCTAGTCCACGATTTCGATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA014374