BGIOSGA014380

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Revision as of 03:57, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA014380| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA014380, complete gene.| tag = DPK2| ...")
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Gene Name

BGIOSGA014380

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA014380, complete gene.

LocusTag

DPK2

Ensembl Transcript ID

BGIOSGA014380-TA

Ensembl Protein ID

BGIOSGA014380-PA

Length

3096

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:29680175..29683270

Sequence Coding Region

29682342..29683270,29680175..29680514

Genome Context

<gbrowseImage1> name=IndicaChromosome04:29680175..29683270 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:29680175..29683270 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGTGGAAGGCCCCAAGTTCGCCGGCATGATGGGCGGCGTCGTCGGCGGCGCCGGCGGCCATGACGACATTGGTGGGAATTTCTGCGACATGGCGTACTACCGGAAGCTCGGGGAGAGCTCCAACATGTCGATCGATAGCCTCAATAGCCTGCAGACCAGCACGCATGGCGGTGGCTCCGTGGCAATGTCGGTGGATAACAGCAGCGTCGGGTCTAGTGATTCCCACACCAGGATGCTCAACCACCCGGGCCTCAGGGGGCATGTCGCAGCCAATTACTCGGTTGGGCACAGCATTTTCCGCCCCGGGCGGGTGTCGCATGCGTTGAGTGAGGATGCGCTTGCACGGGCACTGATGGACCCGAGGTACCCGACTGAGACGCTCAAGGATTACGAGGAGTGGACGATCGATTTGGGTAAGCTCCACATGGGGATGCCCTTTGCACAGGGTGCATTTGGGAAGCTATACAAGGGCACCTACAATGGGGAGGATGTTGCCATCAAGCTTTTGGAGAGGCCAGAGGCGGATCCGGAGAGAGCCGGGCTAATGGAACAACAGTTTGTGCAAGAAGTTATGATGCTTGCAACTTTGAGGCATCCCAACATAGTTAAATTTATTGGGGCATGCAGGAAGCCGATGGTTTGGTGCATTGTGACAGAGTATGCAAAGGGTGGCTCAGTTAGGCAGTTTCTGATGAAGAGGCAGAACAGGTCAGTTCCATTAAAGCTTGCTGTGAAGCAAGCCTTGGATGTTGCAAGGGGCATGGCCTACGTCCATGCTCTTGGGTTCATTCATAGGGACCTCAAGTCAGATAATCTCTTGATTTCTGGCGATAAATCGATTAAGATAGCAGACTTTGGAGTTGCCAGGATTGAAGTCAAAACCGAGGGGATGACACCTGAAACAGGAACCTATCGTTGGATGGCCCCAGAAATGATTCAGCACAGGCCATATGACCAGAAAGTAGATGTCTATAGCTTTGGCATTGTTCTATGGGAGCTCATTACTGGCATGCTCCCTTTCGCTAACATGACAGCAGTACAAGCTGCATTTGCTGTGGTGAACAAGGGTGTCCGTCCAGCCATACCACAGGACTGCTTGCCTGTTCTCAGTGAGATCATGACAAGGTGCTGGGATCCAAACCCTGATGTTCGCCCTCCATTCACCGAAGTAGTTAGGATGCTGGAGCATGCTGAGGTGGTGATCCTGAGCACAGTCCGCAAGGCCCGATTTCGGTGCTGCATCTCCCAACCGATGACAACTGATTGA</cdnaseq>

Protein Sequence

<aaseq>MVEGPKFAGMMGGVVGGAGGHDDIGGNFCDMAYYRKLGESSNMSIDSLNSLQTSTHGGGSVAMSVDNSSVGSSDSHTRMLNHPGLRGHVAANYSVGHSIFRPGRVSHALSEDALARALMDPRYPTETLKDYEEWTIDLGKLHMGMPFAQGAFGKLYKGTYNGEDVAIKLLERPEADPERAGLMEQQFVQEVMMLATLRHPNIVKFIGACRKPMVWCIVTEYAKGGSVRQFLMKRQNRSVPLKLAVKQALDVARGMAYVHALGFIHRDLKSDNLLISGDKSIKIADFGVARIEVKTEGMTPETGTYRWMAPEMIQHRPYDQKVDVYSFGIVLWELITGMLPFANMTAVQAAFAVVNKGVRPAIPQDCLPVLSEIMTRCWDPNPDVRPPFTEVVRMLEHAEVVILSTVRKARFRCCISQPMTTD</aaseq>

Gene Sequence

<dnaseqindica>1..929#2757..3096#ATGGTGGAAGGCCCCAAGTTCGCCGGCATGATGGGCGGCGTCGTCGGCGGCGCCGGCGGCCATGACGACATTGGTGGGAATTTCTGCGACATGGCGTACTACCGGAAGCTCGGGGAGAGCTCCAACATGTCGATCGATAGCCTCAATAGCCTGCAGACCAGCACGCATGGCGGTGGCTCCGTGGCAATGTCGGTGGATAACAGCAGCGTCGGGTCTAGTGATTCCCACACCAGGATGCTCAACCACCCGGGCCTCAGGGGGCATGTCGCAGCCAATTACTCGGTTGGGCACAGCATTTTCCGCCCCGGGCGGGTGTCGCATGCGTTGAGTGAGGATGCGCTTGCACGGGCACTGATGGACCCGAGGTACCCGACTGAGACGCTCAAGGATTACGAGGAGTGGACGATCGATTTGGGTAAGCTCCACATGGGGATGCCCTTTGCACAGGGTGCATTTGGGAAGCTATACAAGGGCACCTACAATGGGGAGGATGTTGCCATCAAGCTTTTGGAGAGGCCAGAGGCGGATCCGGAGAGAGCCGGGCTAATGGAACAACAGTTTGTGCAAGAAGTTATGATGCTTGCAACTTTGAGGCATCCCAACATAGTTAAATTTATTGGGGCATGCAGGAAGCCGATGGTTTGGTGCATTGTGACAGAGTATGCAAAGGGTGGCTCAGTTAGGCAGTTTCTGATGAAGAGGCAGAACAGGTCAGTTCCATTAAAGCTTGCTGTGAAGCAAGCCTTGGATGTTGCAAGGGGCATGGCCTACGTCCATGCTCTTGGGTTCATTCATAGGGACCTCAAGTCAGATAATCTCTTGATTTCTGGCGATAAATCGATTAAGATAGCAGACTTTGGAGTTGCCAGGATTGAAGTCAAAACCGAGGGGATGACACCTGAAACAGGAACCTATCGTTGGATGGCCCCGTAAGTTGAATAAAACAACTACATTAATACTATTTACCATATTATCTGTTAGTTCTAGCCGCGTGCAACACTTTATTTTAGTTAAGAGAATTTTGTTTGGTTACTGAATAAAACAACTACATTAATGCTATTTACCAAGTAGGATATAGTATGTTAGTTAAAGGCGTACTATAACAATTTTTCCTTGTTCTATTAATTGAGGATCTTTAGACTGCATAGCCATAGATGGAATGAAATTAATGCTTTGTTGTTCGGACAGTTAAGGGAAGCTTTGATTAAGAAGAGATGACAGCTTACCGTATGCATAAATGGAAAACTAGAGGATATATTCCAGCTAGGGCACCCACATTGTGGACAATAAGAGTGTTTCATAAGCATTTAGAACCTGGCTTTGTAAATTGTGACAAAGTTCAGAGCTCTGGAGCCGTTGCACTGACGGCGGGCAGCAATGGAGCTTTTGGACTGATCATGCTCATCTGATGACCACCCTATATCCACAGCTCCGCGCGTCCGCCGTCCGATGGTTGCCAACACTAAATCTGCTCGATGGGGACAGTGCCCCTTGGTCCTGGGTCCATTGGATGCTAGCGCTCGAGTAACTTCCCAGGTTCTTGCTGCCCTCCCTTGGTCTTTTCCTCTTGGGGATGCTGTCCCTGTTGCCTGGTGGTTACTGCCTCCTGGATCTACATGCCTGACTTCAGATTGCACCACTTTAGCAGGCCTTCGCTGCCTGCCCGATGACTGACTCTCAATATAAGGGAGAGGTGGATGGGGAGTCTAGTTGGGATTTTTTTTTACCATGTGGGACCCTCCTTAAGGTTCTGTTTGGTCATGTAGCAAGTTCTTGTTAGGCCTTGCTTAAAACCACGTTGGGCCTTGAGCATTAAGGATTCCAGGTTGAAATATCATATATGCAGGTACTTACCATAAATCAGATATAGGTCTTGCAATATGGTAGGGTAGTGCACATCAATTGCTTGTCTTCAGTGCATTCCTTAGTCCTTACCAGCGCAATCTGTTTACCATATGATTGCTGATAGATCTGAATTACCTTAACAGAATCTCTGTTACAAACTATAACAAATGTGTGCATATGTCTTTGCCTCGTTCCTTTTCTTCTGCATCACTAGAAGGCTTCATTTCAGCCCTTAAAATACTTATTACCTGTTATTGGGTCATTAGAATCTAATCCTGTCACCAGTTGTTACTCATTTAGGTTTGTGTAACTTTGTAGGTGAAATGTCAATCAGATTCTTTCTGGAGTCAAGAATATTTAATGTTCAATGTGATCATCATGGCTACCATCTCGGGATGCTAGTAGACTGTAGTAGTACTTAAGTTAAATCTGAGGTTGGGTACATGGTTTGATTGGTTTATCATACAAGGTCACAATTTGTTTGAATAATCTCCTGTTAGTTGTCCTGAACTCTAAATCCTTGGCCACACTTTTGAGTTTCCATCAGTGAGTACTAACTAGATTCTTTCTCAAGTCTAGTGGCACATGCATGTACATTGATGGTTTATAAAGCAAGTGGATGGTTATCTCTATAAGAAATCCAGTCAGTTTAGTCATTATTCCTCATGCCTTAATATTGCTAACACTGTGTTTCCTAGCAGTCTGGAAAAGAAGAAAACAGCATGAAAGCTAAAACTTGCCAATACTGACCTTGTTGTGTTTTACTTCATGGTAGTACATCGTAATATTTTTCAATAGGATACTGAGCAATGAGTTGTTTTCTATTTACTGTTTCAAATTGTAATTCGTTCAATACATTCATCTTATTAACTTGGTTCCTGATGTCTGACTCGCCTATTTTGATCCTGCAGAGAAATGATTCAGCACAGGCCATATGACCAGAAAGTAGATGTCTATAGCTTTGGCATTGTTCTATGGGAGCTCATTACTGGCATGCTCCCTTTCGCTAACATGACAGCAGTACAAGCTGCATTTGCTGTGGTGAACAAGGGTGTCCGTCCAGCCATACCACAGGACTGCTTGCCTGTTCTCAGTGAGATCATGACAAGGTGCTGGGATCCAAACCCTGATGTTCGCCCTCCATTCACCGAAGTAGTTAGGATGCTGGAGCATGCTGAGGTGGTGATCCTGAGCACAGTCCGCAAGGCCCGATTTCGGTGCTGCATCTCCCAACCGATGACAACTGATTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA014380