BGIOSGA014428

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Revision as of 03:58, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA014428| Description = | Definition = Oryza sativa Indica Group BGIOSGA014428, complete gene.| tag = | tid = BGIOSGA014428-TA| pid = BGIOS...")
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Gene Name

BGIOSGA014428

Description

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Definition

Oryza sativa Indica Group BGIOSGA014428, complete gene.

LocusTag

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Ensembl Transcript ID

BGIOSGA014428-TA

Ensembl Protein ID

BGIOSGA014428-PA

Length

2673

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:29029803..29032475

Sequence Coding Region

29032070..29032475,29031452..29031861,29029803..29030156

Genome Context

<gbrowseImage1> name=IndicaChromosome04:29029803..29032475 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:29029803..29032475 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGATCCCAACGATGCCTTCTCGGCCGCGCACCCGTTCCGGTGGGACCTCGGCCCGCCGGCGCCGGCGCCCGTGCCCCCGCCGCCACCGCCACCGCCACCGCCGCCGCCGGCTAACGTGCCCAGGGAGCTGGAGGAGCTGGTGGCAGGGTACGGCGTGCGGATGTCGACGGTGGCGCGGATCTCGGAGCTCGGGTTCACGGCGAGCACGCTCCTGGCCATGACGGAGCGCGAGCTCGACGACATGATGGCCGCGCTCGCCGGGCTGTTCCGCTGGGACCTGCTCCTCGGCGAGCGGTTCGGCCTCCGCGCCGCGCTGCGAGCCGAGCGCGGCCGCCTGATGTCTCTCGGCGGCCGCCACCATGGGCACCAGTCCGGGAGCACCGTGGACGGCGCCTCCCAGGAAGTGTTGTCCGAGGAGCATGACATGGCGGGGAGCGGCGGCATGGGCGACGACGACAACGGCAGGAGGATGGTGACCGGCAAGAAGCAGGCAAAGAAGGGATCCGCGGCGAGGAAGGGCAAGAAGGCGAGGAGGAAGAAGGTGGACGACCTAAGGCTGGACATGCAGGAGGACGAGATGGATTGCTGCGACGAGGACGGCGGCGGCGGGTCGGAGTCGACGGAGTCGTCGGCCGGCGGCGGCGGCGGGGAGCGGCAGAGGGAGCATCCGTTCGTTGTGACGGAGCCCGGCGAGGTGGCGAGGGCCAAGAAGAACGGGCTGGACTACCTGTTCCATCTGTACGAGCAGTGCCGCCTCTTCCTGCTGCAGGTGCAATCCATGGCTAAGCTGCATGGACACAAGTCCCCAACCAAGGTGACGAACCAGGTGTTCCGGTACGCGAAGAAGGTCGGGGCGAGCTACATCAACAAGCCCAAGATGCGGCACTACGTGCACTGCTACGCGCTGCACTGCCTGGACGAGGAGGCGTCGGACGCGCTGCGGCGCGCCTACAAGGCCCGCGGCGAGAACGTGGGGGCGTGGAGGCAGGCCTGCTACGCGCCGCTCGTCGACATCTCCGCGCGCCACGGATTCGACATCGACGCCGTCTTCGCCGCGCACCCGCGCCTCGCCATCTGGTACGTGCCCACCAGACTCCGCCAGCTCTGCCACCAGGCGCGGAGCAGCCACGCCGCCGCCGCCGCCGCGCTCCCGCCGCCCTTGTTCTAA</cdnaseq>

Protein Sequence

<aaseq>MDPNDAFSAAHPFRWDLGPPAPAPVPPPPPPPPPPPPANVPRELEELVAGYGVRMSTVARISELGFTASTLLAMTERELDDMMAALAGLFRWDLLLGERFGLRAALRAERGRLMSLGGRHHGHQSGSTVDGASQEVLSEEHDMAGSGGMGDDDNGRRMVTGKKQAKKGSAARKGKKARRKKVDDLRLDMQEDEMDCCDEDGGGGSESTESSAGGGGGERQREHPFVVTEPGEVARAKKNGLDYLFHLYEQCRLFLLQVQSMAKLHGHKSPTKVTNQVFRYAKKVGASYINKPKMRHYVHCYALHCLDEEASDALRRAYKARGENVGAWRQACYAPLVDISARHGFDIDAVFAAHPRLAIWYVPTRLRQLCHQARSSHAAAAAALPPPLF</aaseq>

Gene Sequence

<dnaseqindica>1..406#615..1024#2320..2673#ATGGATCCCAACGATGCCTTCTCGGCCGCGCACCCGTTCCGGTGGGACCTCGGCCCGCCGGCGCCGGCGCCCGTGCCCCCGCCGCCACCGCCACCGCCACCGCCGCCGCCGGCTAACGTGCCCAGGGAGCTGGAGGAGCTGGTGGCAGGGTACGGCGTGCGGATGTCGACGGTGGCGCGGATCTCGGAGCTCGGGTTCACGGCGAGCACGCTCCTGGCCATGACGGAGCGCGAGCTCGACGACATGATGGCCGCGCTCGCCGGGCTGTTCCGCTGGGACCTGCTCCTCGGCGAGCGGTTCGGCCTCCGCGCCGCGCTGCGAGCCGAGCGCGGCCGCCTGATGTCTCTCGGCGGCCGCCACCATGGGCACCAGTCCGGGAGCACCGTGGACGGCGCCTCCCAGGAAGGTATCTTACGACGCATCGATCATACCACTATCTTTCTCGTCTTGTTTCATGTGATTACCGAGCATTCTCGTGCGTACTGTGTGTTCTTGCGTGTGAATTGCGACGATGTCATCGTGCATGCATGCAAAAGCTGATCGGTTAAATTCTTAACCATGTTCCTGTGCTTGTTCTGTACACGATGCTGTGATGCATGCATGCACGCGAACAGTGTTGTCCGAGGAGCATGACATGGCGGGGAGCGGCGGCATGGGCGACGACGACAACGGCAGGAGGATGGTGACCGGCAAGAAGCAGGCAAAGAAGGGATCCGCGGCGAGGAAGGGCAAGAAGGCGAGGAGGAAGAAGGTGGACGACCTAAGGCTGGACATGCAGGAGGACGAGATGGATTGCTGCGACGAGGACGGCGGCGGCGGGTCGGAGTCGACGGAGTCGTCGGCCGGCGGCGGCGGCGGGGAGCGGCAGAGGGAGCATCCGTTCGTTGTGACGGAGCCCGGCGAGGTGGCGAGGGCCAAGAAGAACGGGCTGGACTACCTGTTCCATCTGTACGAGCAGTGCCGCCTCTTCCTGCTGCAGGTGCAATCCATGGCTAAGCTGCATGGACACAAGTCCCCAACCAAGGTACGCGTGATTTACGAGCATTACGTATCTTACGTACTCTATATCTTACGTACTCCTACCCTACTATGCTCGCGTTCTTGCATAAGCATGCAGACGTAAGACGATCTGAATAAGACTACTGTCATCCCAACGGCTCGACTTGTTTATTGTTTATTACTCATTCACAGTTACTCCTATAAGTACTACTATACTAGTAGGAGCAAATACATCGTGCTGCCGTCAGATATGGAGTAGGAGTATTCTGTTGGCCAGTCTTGAGTTAAAAAGGTTCGAAAGATTCATTATCATTGCATGGTAACAAACAGTTGATTACTAAAGCATCTAGTAAATAACTTGAGTATTTTCAATGCTTAAGTTTTCCGCCTATTCAAAACTTTTAGCATTGGCTCTTTGACTTAAAAGGGCGACAGTGTTTAAAATTTCTAGAAAATCAACTGTACAACGGGCAAAACCTTTTGAAAAACATTCGTAAAACAGCAGGAATGCTCACTCTCCTTCTGTAAGACTTGCTAGGGTGTTAATCTGTTCTACAATTCATGCACACAGACGAGGAACACACATCACATGGTAACAGGATGCTCCCTGTTTCTGTCATACCGGTATTTCTGCCATGCACTCGTGCTCTCCCTGTTTCATTAGTCCCATGCATAGCCGTCCGTTCGCTTTGTTACACGCAAACAGTGATTACGTAGTGGATGCTTCACGTACGCGGGTAGTAGAAGAATTCAGGAAGAGCTGGACACGCGCGCGTACGCCGATGCGCAGTAGTACCAAGTACCAACCTGAAAAAGAGTGCCGACGTGTCAGTTGCAGGTAGGCTGGCAAAGCCTGCGTTCCATGTGTTGTCTTGTCGGGCCCTAGCCATCAGCGTAGGCATGCATGGCAATGGAGCCACACCCCACAGCCATGGAGCCATATGGAGGTAGGGGGAGGAGGACGGCCACTTCCTCGGATTCCGTGGCGGCAATCCCTCGCACGTACGGCCATGTGAGCTCACCTGCCGCCGTGGATCAGGGCGCTCAGCTCGGAGACGGTGCAATGAAATGAATGCACGCACGGCCTGGTCGGGGTTCCAGGGTGATTGGATGGCTTTGCATCCCGTCCACTCACAGCCCGGACGGACCGGCTGCTGCATCGATGCGCTCCTGCGCCCCCAAGCAGCCGATCAGATCCGTGATCTCACTGTGCGACGCATGAGTCATGTGCACGAGCTAGCTGCACGCACACGCGAACGTCTCGGTGGTGAAACGCAATGAAATGGCCTTCATGCATCATGCATGTATGGGTGGATGCAGGTGACGAACCAGGTGTTCCGGTACGCGAAGAAGGTCGGGGCGAGCTACATCAACAAGCCCAAGATGCGGCACTACGTGCACTGCTACGCGCTGCACTGCCTGGACGAGGAGGCGTCGGACGCGCTGCGGCGCGCCTACAAGGCCCGCGGCGAGAACGTGGGGGCGTGGAGGCAGGCCTGCTACGCGCCGCTCGTCGACATCTCCGCGCGCCACGGATTCGACATCGACGCCGTCTTCGCCGCGCACCCGCGCCTCGCCATCTGGTACGTGCCCACCAGACTCCGCCAGCTCTGCCACCAGGCGCGGAGCAGCCACGCCGCCGCCGCCGCCGCGCTCCCGCCGCCCTTGTTCTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA014428