BGIOSGA014434

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Revision as of 03:58, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA014434| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA014434, complete gene.| tag = OsI_172...")
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Gene Name

BGIOSGA014434

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA014434, complete gene.

LocusTag

OsI_17225

Ensembl Transcript ID

BGIOSGA014434-TA

Ensembl Protein ID

BGIOSGA014434-PA

Length

4575

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:28938690..28943264

Sequence Coding Region

28943247..28943264,28942904..28943063,28941697..28941831,28940893..28941224,28940672..28940782
,28940085..28940584,28939623..28939791,28939115..28939354,28938911..28939042
,28938690..28938824

Genome Context

<gbrowseImage1> name=IndicaChromosome04:28938690..28943264 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:28938690..28943264 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGTTACACCCGCCTCCGGTACGCCGCTGTGTCAGCAGGATGCCACGCAAGGTTGTCTCTGGGCCTGACTACGATGACGAGTACGACGATGACTATGATGAGTATGATGAGGACTACGATGATTACGGTGAGACCGGGCACAGTGACGACATTCAGCACCCCGTGAAGGAGGAGAAAGTCCATGGGATACCAAGTGATTTTGGGACACCTTCGATGCCGAAATCTGACTGTACCAAGATGCCAGTGAATACTCGTACTACAGACTTTGATGGTGACCCTGAGATAAAGAATGCTAGCATATCTCATGAGAAAGTTGGTTCCACGCAGTACACATCTGCTGGTAGCTCATCAGGCGCTGGGAAAAAGGTGAAACACATTGCACTTCCTGAAGATGTGCCTGTCGAGAGGACAGCTCAATTGATTTCTGATCATTTTCAGCTGAAGGAGGACCAGAGTAGTAGGGCTAGCAGTTCTGCGCAGAATGAGGATGTGGCCCAGAAACTTTCTTCTGACATACAGAAGCTAGGTTTAGAAAAGAATGAAGTAGATACTGCAAAACCTTATTTACCTGAAGAATATAAGCCTGAGAAGTGGATGTTCGCTAATGAGGAATCAGGAGTGCTGAGCCAACTAAACCTTGCAATAGTAGGTCATGTTGATTCTGGCAAGTCAACACTCTCTGGGAGACTGCTACATCTGTTAGGAAGGATATCGAAAAAAGATATGCACAAGAATGAGAAGGAGGCTAAAGAAAAAGGAAAAGGATCATTTGCTTATGCGTGGGCTATGGATGAAAGCAGTGAAGAAAGAGAAAGAGGCGTGACAATGACTGTGGCCGTGGCTTATTTGGAGACTAAGAAGTACCGTGTAGTTTTGCTTGACTCTCCAGGCCATAAAGATTTTGTACCAAATATGATATCTGGCGCAACGCAAGCTGATGCAGCTATTCTTGTTGTTGATGCTTGCACTGGTTCATTTGAAGCTGGCATGGACGGTGAAGGAGGGAAAAGTGTTGGCCAGACAAAAGAACATGCTCAGCTTATTAGAAGCTTCGGCGTTGAACAGCTTATTGTTGCGGTCAACAAGATGGATGCCATCGGCTACTCGAAAGAAAGATTTGAGTTCATCAAGGTTCAACTTGGTAGTTTTCTGCGGTCATGCAATTTCAAAGATTCATCTGTTACCTGGATTCCTCTTAGTGCTGTTGAAAATCAGAATTTGATCAAAATTCCTTCTGATGTCCGTTTAACTTCCTGGTATCAAGGATTTTGTCTCTTGGATGCTATAGATTCCTTGCAGCTTCCATCTCAGGATGTTTCAAAGCCCCTCATTCTTCCTATCTGTGATGTTATCAAGTCTCAGTCAACAGGGCAGTTTGCAGCCTTTGGAAAATTAGAGACTGGAGCTATTCGAATTGGTTCAAAGGTTTTAATTTCACCTTGTGGGGAAGTGGCGGCAGTGAAATCCATCGAGCGGGATTCAAATTCATGTGACATAGCAAGAGCTGGTGATAATGTAGCGGTTAGTTTACAGGGTATCGATGGGAGTAAGCTAATACCAGGTGGGATTCTTTGCAACCCTGGTTTCCCAGTGCCTGTCTCTAACTTCTTGGAGCTAAGGGTTCTAGTGTTAGACGTCACCATTCCTATCCTTATTGGCTATCAGGTCGAATTTCACATACATCATGTGAAGGAGGCTGCGAGGGTTACGAAAATCGTGGCATTGCTTGACAAGGCTGGCAAACCAAGCAAAACTGCACCTCGTTTTCTTAAGTCAAAGCAGAATGCAGTTGTGCAGGTTACCTTAGACGCTCCGGTCTGTGTTCAAGAATTCTCCAAATGCCGAGCTCTTGGCAGGGCATTCTTAAGGTCTTCTGGAAGCACGATCGCTGTTGGAGTCGTAACGCGGGTACTCCGGCAAGATCAGAACTGA</cdnaseq>

Protein Sequence

<aaseq>MLHPPPVRRCVSRMPRKVVSGPDYDDEYDDDYDEYDEDYDDYGETGHSDDIQHPVKEEKVHGIPSDFGTPSMPKSDCTKMPVNTRTTDFDGDPEIKNASISHEKVGSTQYTSAGSSSGAGKKVKHIALPEDVPVERTAQLISDHFQLKEDQSSRASSSAQNEDVAQKLSSDIQKLGLEKNEVDTAKPYLPEEYKPEKWMFANEESGVLSQLNLAIVGHVDSGKSTLSGRLLHLLGRISKKDMHKNEKEAKEKGKGSFAYAWAMDESSEERERGVTMTVAVAYLETKKYRVVLLDSPGHKDFVPNMISGATQADAAILVVDACTGSFEAGMDGEGGKSVGQTKEHAQLIRSFGVEQLIVAVNKMDAIGYSKERFEFIKVQLGSFLRSCNFKDSSVTWIPLSAVENQNLIKIPSDVRLTSWYQGFCLLDAIDSLQLPSQDVSKPLILPICDVIKSQSTGQFAAFGKLETGAIRIGSKVLISPCGEVAAVKSIERDSNSCDIARAGDNVAVSLQGIDGSKLIPGGILCNPGFPVPVSNFLELRVLVLDVTIPILIGYQVEFHIHHVKEAARVTKIVALLDKAGKPSKTAPRFLKSKQNAVVQVTLDAPVCVQEFSKCRALGRAFLRSSGSTIAVGVVTRVLRQDQN</aaseq>

Gene Sequence

<dnaseqindica>1..18#202..361#1434..1568#2041..2372#2483..2593#2681..3180#3474..3642#3911..4150#4223..4354#4441..4575#ATGTTACACCCGCCTCCGGTGAGCACCCGTGCCGACGCACATCCTCTTTCTTTGCCATCCCTCCCGTTCTACCCACACCCTTTTTCTCTCGAATTTGCCTCAACCTTATCATCTCTTCTAGATCTGGAAGCTAGGTTTTCTCTTTGCCTTTTTATTAACCTTTTAGTTTTACTAATAACACTAATTTTTGTTCCCCATTAGGTACGCCGCTGTGTCAGCAGGATGCCACGCAAGGTTGTCTCTGGGCCTGACTACGATGACGAGTACGACGATGACTATGATGAGTATGATGAGGACTACGATGATTACGGTGAGACCGGGCACAGTGACGACATTCAGCACCCCGTGAAGGAGGAGAAAGGTATTATGTCGAAGGTTTGAAGCTAGTACTAGACAGTGTACACCTCAGCTTGTAAGAATGGTGAAATAGCTATTAGAGTCGCTTCATGATGCACACTTAACATATCTACTCGTGTAGGTTAGTTACGGCGGTGTAGGTTACAAGGAGCGTTCACCCGGTTATCATAATTTGCTCAGTGGTGTTAAATGTTGTTAATGACATTACATTGTTTCCATCCTGCATTTGTACTTGCTATCGCATCCTCTATTGCCTGAATATGCAAATAAGAACACGGTATGCTTAATTACTCTAAAACTTCCAATAGCATTGCTTGTTCAAACAAATGCAGTGATCGTGTAGCTTATGTCTGCCGATTACCTGGCCTTGCTCTAATTTCCTTGCCCATTTATCCCATCATATGCACTTCAGATATTTGTTGTCTCGAAGGCATTGTTATTCAACATGCATTTTTTGGAATGAGTCAAATATCATTCATCCAGTTAGTCCATCAAAATAAAAACTTACTGCAAATCAAATCTACCCAAATTGGGTGAGAATCGAAACATAGCTGGCTGCCAGTTAGAACTACCAGGGTTACCTACTGGTTGCTTACTGAATCCTGGTGCATATGCATATTATTGTTCTATATATTTGAGGCCTTTTGAAATAATTCATATGCCTATACATTTAACCGTTGCTTTCCTCATAAGCTCCATGCACTGAATGCTTCACTTTGTTGTTGTACAGTGAGTTTTTTTTTGTGATTTATTCAGCATATCAAGCTAACTGCGTCTAGTACAGCTCCCTTGATCTCTAATATTATGTCACCACTCTATTGTGCAGAGTCATCGAAGAAGTCCTCAAGTACGGTGCCTGTGCTTTGGAGATGCTCCATGTGCATGTTCGATAATCATGAAAGCATGGTGTATTGTGAGATGTGTGGGTTTTTCGAGAATCCTTTATGAAATCTGCCAAGGATGGTTCAATAAAAGGTAACATGCTTCACCCATTCTAATTTTCTTTGAATCACAATTTGTATTCCAACAAGGAATTCTAATGTAATCATAGTGTACTTATAACTATTAAATTACAGTCCATGGGATACCAAGTGATTTTGGGACACCTTCGATGCCGAAATCTGACTGTACCAAGATGCCAGTGAATACTCGTACTACAGACTTTGATGGTGACCCTGAGATAAAGAATGCTAGCATATCTCATGAGAAAGGTACTGCTGGTGCAAATGGTAGATGCTTTACAATTTTGTGTATGCAACTCTGTTCTACCTTTAAACTAGCTTCTCCTTCTATAACACCTTATTGAGTTATGAAAAGGATAATTCATAATTCACCATATAAAAGAAGCACATTAGATCATCTTATGTGCGGGAAGCAGATTTTGATCCTTTTCTTTCCCAAGCACCATTGTTACTTAGTGTGGCTGAACAGATTGTTCCCTTGCATACCACTTAAAAATGTTTCACCTGTTGGGCAACAACAACCCACAGCTCACGTGTCATGCACTCCAAAGACTGAAGCAAGCTGACTGTTTGAAGGGTGACTTATTTTGTACTCGATTTGCAGATCTTCCCAACCAGTTGTATCATCTGTTGGTTGATAAGCCTTCCTGTTGAAAATAAGCGTCCTGTTAGCTGTGTTTTTTATTGTCACCTTAATTTAAATTATTTTATTATTCAACAGTTGGTTCCACGCAGTACACATCTGCTGGTAGCTCATCAGGCGCTGGGAAAAAGGTGAAACACATTGCACTTCCTGAAGATGTGCCTGTCGAGAGGACAGCTCAATTGATTTCTGATCATTTTCAGCTGAAGGAGGACCAGAGTAGTAGGGCTAGCAGTTCTGCGCAGAATGAGGATGTGGCCCAGAAACTTTCTTCTGACATACAGAAGCTAGGTTTAGAAAAGAATGAAGTAGATACTGCAAAACCTTATTTACCTGAAGAATATAAGCCTGAGAAGTGGATGTTCGCTAATGAGGAATCAGGAGTGCTGAGCCAACTAAACCTTGCAATAGTATGCTATACTCATCTTCTGTTCTGAATATGGCATATGTTCCTTAACAATTTTGTTATTCTAAAAGTGCTTTGTCTAAATAGGTTACTGTCTACGAACAATTTGTTTAGGTAGGTCATGTTGATTCTGGCAAGTCAACACTCTCTGGGAGACTGCTACATCTGTTAGGAAGGATATCGAAAAAAGATATGCACAAGAATGAGAAGGAGGCTAAAGAAAAAGTAAGTTTATTATTGTTGTTATTGTACTCTACTTGATCCTGATGTTCCATTCATATTCTTTGTATTATGGAAATTATTTTTTACCAGGGAAAAGGATCATTTGCTTATGCGTGGGCTATGGATGAAAGCAGTGAAGAAAGAGAAAGAGGCGTGACAATGACTGTGGCCGTGGCTTATTTGGAGACTAAGAAGTACCGTGTAGTTTTGCTTGACTCTCCAGGCCATAAAGATTTTGTACCAAATATGATATCTGGCGCAACGCAAGCTGATGCAGCTATTCTTGTTGTTGATGCTTGCACTGGTTCATTTGAAGCTGGCATGGACGGTGAAGGAGGGAAAAGTGTTGGCCAGACAAAAGAACATGCTCAGCTTATTAGAAGCTTCGGCGTTGAACAGCTTATTGTTGCGGTCAACAAGATGGATGCCATCGGCTACTCGAAAGAAAGATTTGAGTTCATCAAGGTTCAACTTGGTAGTTTTCTGCGGTCATGCAATTTCAAAGATTCATCTGTTACCTGGATTCCTCTTAGTGCTGTTGAAAATCAGAATTTGATCAAAATTCCTTCTGATGTCCGTTTAACTTCCTGGTAAGTTATGTTTTGACACACTACTTCCATGCCATTCGGAACACTACATCGTGTAGAATTTTTCAACAGAGGTGGCTGTTTCATGCATCTTGCAATTTCTAACCTTTTCACATGGTAATATCGACATATCGTAGTAAGCACCCATTTGGGTCAAATCAGATAGTTTGGATGATTTGAACATATATGAGAATAGCATTACTGATCTTTTGAAATATTTGGGACCATACCGTCTTCTCAGAATAAAAAAAATCATATATCTGAACAACAGGAATCTTGAACTGATGTCCTTTCAGGTATCAAGGATTTTGTCTCTTGGATGCTATAGATTCCTTGCAGCTTCCATCTCAGGATGTTTCAAAGCCCCTCATTCTTCCTATCTGTGATGTTATCAAGTCTCAGTCAACAGGGCAGTTTGCAGCCTTTGGAAAATTAGAGACTGGAGCTATTCGAATTGGTTCAAAGGTACATTCCTCACAAATCAGCAGGGACTGTTGATACTTGTATATTTAACTGAGATCAGCTCCAAATATGAGGATAGAGGAAAGATTGATAAATAGCGTTTACATTGTGACATTTGCTAGTTGCATATTTGCATGCCAATCTTTCAGTAACAGCATGGTGTCGGAATTTGGTCTTTTTTCAAAAAAAATATATTTATACTTGCTTTTGTACACAAATATTTGTCTTGACATTTCTATCTGTTCTGACAGCTTGGAACTTGCTGTTGCAGGTTTTAATTTCACCTTGTGGGGAAGTGGCGGCAGTGAAATCCATCGAGCGGGATTCAAATTCATGTGACATAGCAAGAGCTGGTGATAATGTAGCGGTTAGTTTACAGGGTATCGATGGGAGTAAGCTAATACCAGGTGGGATTCTTTGCAACCCTGGTTTCCCAGTGCCTGTCTCTAACTTCTTGGAGCTAAGGGTTCTAGTGTTAGACGTCACCATTCCTATCCTTATTGGCTATCAGGTAAAGATATGACCAAAAGCTCTCTTTGATTATTTTCTTCCCTGATGCAATCTGATAATAATACGGGCCTAGGTCGAATTTCACATACATCATGTGAAGGAGGCTGCGAGGGTTACGAAAATCGTGGCATTGCTTGACAAGGCTGGCAAACCAAGCAAAACTGCACCTCGTTTTCTTAAGTCAAAGCAGAATGCAGTTGTGCAGGTAACAACTGATCACAGATCCTTGTGAGGAGCCATTGCTTACGAAGTCATCATCTGCGATGTTTTGATTTTCTTGATATTTGTCAGGTTACCTTAGACGCTCCGGTCTGTGTTCAAGAATTCTCCAAATGCCGAGCTCTTGGCAGGGCATTCTTAAGGTCTTCTGGAAGCACGATCGCTGTTGGAGTCGTAACGCGGGTACTCCGGCAAGATCAGAACTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA014434