BGIOSGA014436

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Revision as of 03:58, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA014436| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA014436, complete gene.| tag = OsI_172...")
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Gene Name

BGIOSGA014436

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA014436, complete gene.

LocusTag

OsI_17223

Ensembl Transcript ID

BGIOSGA014436-TA

Ensembl Protein ID

BGIOSGA014436-PA

Length

2543

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:28930707..28933249

Sequence Coding Region

28933111..28933249,28932604..28932650,28931827..28932104,28930707..28931505

Genome Context

<gbrowseImage1> name=IndicaChromosome04:28930707..28933249 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:28930707..28933249 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGGCGTGGGCTGACGCCGCGCTGCTCCGCGCCTCCTCCTCCCCCGGCTCCGGCAACGCCGACGCGTTCTCCTCGTCCTCGTGCTGCTGTCTTCGCAGGCCGAGCGCATCTCTGGGTCCGGCTACACCCCCGCAAGGTGCTTCCTTTAGTATACGAGATATGGTATTTAGGCTTTTTGATAAGAGCTTTCTTTATACCAGTAGCCCCAAATCTGGTTTCCTAATTAATAGTTGTCGAGCAAGGAGCTTGAAGGTTAAAGCAAAAATGGATTCTGGTGATGGCCTTACAAGACTTGCTCCACTTATGTTTGAAACTCCAAGCGGTCAACTTCTGGTCCAGATACTCCAATCACACCCTCACCTACTTCCTGCAACAGTTGACCAGCAACTTGAAAACCTTCAATCAGAGAAAGATGCTCAAGAGAAAGAAGCCTCGAAAGTTCCCCAGGACCTCCTTTACAAGAGAATAGCAGAAGTCAAAGAGAAGGAAAGGCAGAACACCTTGGAAGAGATCATCTACTGTTGGATTATTTATAAGTTCATGGAGAATGACATATCAATGACACCTGCATTAGCACCATTAGGTGGCCCTGTACGTGACATCTCCTCATTGCCTAACCAAGAGGATAGGTTGCAAAGCATACATTCCCCGGACGCTCTTGAGATGATACAAAATCATCTCAACCTTATAATGGGTGAAAAGGTAGCAGCCCCACTAGATACAGTTGTTGAAATCAGCAACTTAAATCTGGGAAAGCTTTATGCAGCATCCATCATGTATGGCTACTTCCTAAAGAGGGTAGATGAGCGATTCCAACTCGAGAAGAACATGAAGACTCTCCCGCCAAATCCTAAGCAACAGATAGTACTTGAAAACCTGAAGCCTAATCCATTCTGGGATATGGAATCATTGGTGCAAATTACACCTGATGGGGAGGAGATCGATTTGGATGATGAAGAATCAAATCCAAACAAGCTGAGGTCCTATGTTTCACGCTTGGATGCTGATACGTTGCAAAGGTATGCTACTATCAGATCAAAAGAGGCCGTCTCACTGATAGAGAAGCAAACACAGGCGTTGTTTGGACGGCCAGATATTAAAGTCTTAGATGATGGCTCTGTCAATGCAAAGGATGGTCAAATGATAACAATAACTTTCATAGAACTCACCCATCTTGTTTTGGAGGCAGCTGCTTTTGGATCCTTTTTGTGGGAAGCTGAGAGTCATGTAGAATCCAAATACCATTTTGTTAACAGTTAA</cdnaseq>

Protein Sequence

<aaseq>MAAWADAALLRASSSPGSGNADAFSSSSCCCLRRPSASLGPATPPQGASFSIRDMVFRLFDKSFLYTSSPKSGFLINSCRARSLKVKAKMDSGDGLTRLAPLMFETPSGQLLVQILQSHPHLLPATVDQQLENLQSEKDAQEKEASKVPQDLLYKRIAEVKEKERQNTLEEIIYCWIIYKFMENDISMTPALAPLGGPVRDISSLPNQEDRLQSIHSPDALEMIQNHLNLIMGEKVAAPLDTVVEISNLNLGKLYAASIMYGYFLKRVDERFQLEKNMKTLPPNPKQQIVLENLKPNPFWDMESLVQITPDGEEIDLDDEESNPNKLRSYVSRLDADTLQRYATIRSKEAVSLIEKQTQALFGRPDIKVLDDGSVNAKDGQMITITFIELTHLVLEAAAFGSFLWEAESHVESKYHFVNS</aaseq>

Gene Sequence

<dnaseqindica>1..139#600..646#1146..1423#1745..2543#ATGGCGGCGTGGGCTGACGCCGCGCTGCTCCGCGCCTCCTCCTCCCCCGGCTCCGGCAACGCCGACGCGTTCTCCTCGTCCTCGTGCTGCTGTCTTCGCAGGCCGAGCGCATCTCTGGGTCCGGCTACACCCCCGCAAGGTGCGTTACGTGCTCCCTCCCCTCTTCGCTCCCTGTCAATTTGATGTGTCGCTGCCGCTGCGCGCTTCTGTTCCTCCGTTGGGATTCGCTCGGCAACTGTTTGTTGAATGCCCTGACGGGGGTTCTCGTGAGTGTATTGGCAACCTGGGATCGTCAGCTGTTCTGTTCATCCATGTATGTATGATGGGGCTCCTTAAAAATTGGAGCGCCTCCTTGCTAGTAGTAAGATTTATTTAGCTGAGATTTTTGGTGGAAAGTGTTGGATGTACGTCGGGTTGCAAAAGAAAGGGGGTCTGGAGAATAATTTAGGAATATAATACTTGGTTAAATCATTTCCAATATGGTATGCAGTCCGCTTTGCTTTGCTATAGTAACCGTAACCAATAGCTGTGTTGCACTGTGTGCTCTGTGCTGCTTTACTTTGAAATACATCTTCTCCTGCTATAGCAACATTGATAAGGTGCTTCCTTTAGTATACGAGATATGGTATTTAGGCTTTTTGATAAGGTGCTTCCTTTAGTATACGAGATATGGTATTTAGGCTTTTTGGATGCCGGGTTTTACTTTTCAGTTTTCAGCATAAATTGTACACGTTTAGTTCTTGTATTTTATTCGAGCTACGCTATAGATTTTTGATATTTTGTGATTCCTGCCATTGCAAAGCCAACTCCTAAGATGTTCTGTCAGATTATCCATATTTCTCACTTGTTATGCTCATTCAATTGCCAAGGGAGTTGGCTGTCCAATCTCTTGGTTGATTTTTTTAGACAACGTGAGGCTTGTATTGTAGTTGACATTGGATAATGATCATCACATTAAGCCTTTCTGGCCATTGGGCTTAGCATTAGTATCCTAATTTACCAGTGTTACAACTCAATGCTTATACCATGATTCTTAATGGAATGATAAACACTAATATATTGTATAGCAGTAATATACTAGTGTACACCCCTGCCCCAACCTAAGTTATATCGGGTCAACTGGATGATGGTTTGTTGTTCTGCAGAGCTTTCTTTATACCAGTAGCCCCAAATCTGGTTTCCTAATTAATAGTTGTCGAGCAAGGAGCTTGAAGGTTAAAGCAAAAATGGATTCTGGTGATGGCCTTACAAGACTTGCTCCACTTATGTTTGAAACTCCAAGCGGTCAACTTCTGGTCCAGATACTCCAATCACACCCTCACCTACTTCCTGCAACAGTTGACCAGCAACTTGAAAACCTTCAATCAGAGAAAGATGCTCAAGAGAAAGAAGCCTCGAAAGTTCCCCAGGACCTCCTTTACAAGTAAGTATCCCCAGAATTGTAGGATGCCATTTCCTTCATGATCATTTATGCTATTCTATTATTCATCATGTTTTAGTGTTTTACACTCAGATATAACCCCACTACCTGGCATGTATTGTTAGTCGCACAATATTTAAAAACAAGTCCATATGTTCTACTGCCAAAGGCTGCAATTCAGTGCATATAAAAAAAAGACGTGGAGAAAAATCTTTAGTATGCATAGCATAGATGATAAAGAAATGGTAAGGACAGAACATTAGATGTTCTAGTGGAGGATGCATTTAAAGAACTGACTGAAAAGCTAAGCTGATTGAATTACAGGAGAATAGCAGAAGTCAAAGAGAAGGAAAGGCAGAACACCTTGGAAGAGATCATCTACTGTTGGATTATTTATAAGTTCATGGAGAATGACATATCAATGACACCTGCATTAGCACCATTAGGTGGCCCTGTACGTGACATCTCCTCATTGCCTAACCAAGAGGATAGGTTGCAAAGCATACATTCCCCGGACGCTCTTGAGATGATACAAAATCATCTCAACCTTATAATGGGTGAAAAGGTAGCAGCCCCACTAGATACAGTTGTTGAAATCAGCAACTTAAATCTGGGAAAGCTTTATGCAGCATCCATCATGTATGGCTACTTCCTAAAGAGGGTAGATGAGCGATTCCAACTCGAGAAGAACATGAAGACTCTCCCGCCAAATCCTAAGCAACAGATAGTACTTGAAAACCTGAAGCCTAATCCATTCTGGGATATGGAATCATTGGTGCAAATTACACCTGATGGGGAGGAGATCGATTTGGATGATGAAGAATCAAATCCAAACAAGCTGAGGTCCTATGTTTCACGCTTGGATGCTGATACGTTGCAAAGGTATGCTACTATCAGATCAAAAGAGGCCGTCTCACTGATAGAGAAGCAAACACAGGCGTTGTTTGGACGGCCAGATATTAAAGTCTTAGATGATGGCTCTGTCAATGCAAAGGATGGTCAAATGATAACAATAACTTTCATAGAACTCACCCATCTTGTTTTGGAGGCAGCTGCTTTTGGATCCTTTTTGTGGGAAGCTGAGAGTCATGTAGAATCCAAATACCATTTTGTTAACAGTTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA014436