BGIOSGA014439

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Revision as of 03:58, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA014439| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA014439, complete gene.| tag = OS04G05...")
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Gene Name

BGIOSGA014439

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA014439, complete gene.

LocusTag

OS04G0594400

Ensembl Transcript ID

BGIOSGA014439-TA

Ensembl Protein ID

BGIOSGA014439-PA

Length

3295

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:28908002..28911296

Sequence Coding Region

28911291..28911296,28909855..28909967,28909705..28909780,28908749..28908832,28908002..28908667

Genome Context

<gbrowseImage1> name=IndicaChromosome04:28908002..28911296 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:28908002..28911296 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGGCAAGCACTTTTAGCACAGTCAAGGTGAGCAATGTGTCACTGAAAGCATCACTGCGAGATGTAAAGGAATTCTTTTCCTTTTCTGGTGACATTGTGCATGTTGAAATGCAAAGCAGTGATGAGCTGTCTCAAGTTGCCTACATTACTTTTAAAGACAATCAAGGATCTGAGACGGCTATGCTTCTTACGGGTGCCACAATAGTTGATATGGCTGTCATTGTCACGCCAGCTACCGATTATGAGCTACCAGCTTCTGTTTTAGCTGCTCTAGAGCCCAAGGATAGTAAGCCTTCTGCCCTTCAAAAGGCAGAGGACATTGTTGGGACCATGCTGGCCAAGGGATTCATTTTAGGTAGGGATGCACTGGACAGAGCAAAAGCCTTGGATGAGAAGCATCAACTCACATCAACTGCAACTGCTAGAGTATCTTCCTTTGACAAGAAAATGGGTTTAAGCGAGAAGATCAGTGTTGGCACTTCGGCTGTAAATGATAAAGTGAAGGAAATGGATCAGAAATACCAAGTCTCTGAGAAGACAAGGTCAGCACTGGCAGCTGCTGAACAGAGTGTCTCTACTGCTGGATCTGCCATCATGAAGAACAGGTATGTCCTTACTGGAGCAGCATGGGTAACTGGTGCTTTCAATAAGGTTGCCAATGCTGCAAATGATGTTGGCACAAAAGCAAAGGAAAAAATAGCATCTGAGCAGGAGCACAAGACTGTAGAGCTTGAGTCTGCAGAACCTAACAGCTCAGAAGGCCATGGAACACAAAAGGATGTGGATGGTGAATTCGCCAAGATACAGGTCTCTGAATCCCCTGAAGATATTCCCATCTCTACGACTGCAACCGTCCCCATTACTGATGAGGATTCCAGTCAGGCGTCTCCACCTGCCGCCTCTCCCAAAAAGCCAGAACCTGCGCAGGGGTTGATACTATGA</cdnaseq>

Protein Sequence

<aaseq>MAASTFSTVKVSNVSLKASLRDVKEFFSFSGDIVHVEMQSSDELSQVAYITFKDNQGSETAMLLTGATIVDMAVIVTPATDYELPASVLAALEPKDSKPSALQKAEDIVGTMLAKGFILGRDALDRAKALDEKHQLTSTATARVSSFDKKMGLSEKISVGTSAVNDKVKEMDQKYQVSEKTRSALAAAEQSVSTAGSAIMKNRYVLTGAAWVTGAFNKVANAANDVGTKAKEKIASEQEHKTVELESAEPNSSEGHGTQKDVDGEFAKIQVSESPEDIPISTTATVPITDEDSSQASPPAASPKKPEPAQGLIL</aaseq>

Gene Sequence

<dnaseqindica>1..6#1330..1442#1517..1592#2465..2548#2630..3295#ATGGCGGTGAGCATCCTGCTCTCTGTTTTTTTTCTCTCTCTTTCTCTTGATTGTATTGTTCGTGTCTTCATGAATCTCGTATGGGGCCGGATGGTGGTGGCTTTGGCATTTCCGATCCGAGCATTTTGTTGTGCTTTGGTATCGGAGCTTGAACAGATTTGGGGTTTATGCTACGGGTTCTTGATTTGGGTATAAGCTTAGTGTCGGCCGCATCTGGTTGACTACACGGGAAAGTAGCGATTCGTGGCTGGCTCCGCCTAATGGTGTTTGGTAGAAATGAAATGGACTGGCATTGGTTTGGCAGATTGCCAGGAAGCAGCCATTACCCCATTAGTTATCACTTGCCAAGTGCTACCCGGCCAAATCTCGATTGTACTACTTTAGCCAGCATTTTAGTCCTGTATGAGCTATATGGAATTACTGCCGCAGCAAATCTCACTGTAGATTGTTCTCTGGGTGCTGGAAATGTTTAAAAGATGCGGTCTCCTAGTTGATTCCTACAGATGGCACTGCTGATAAGCCATCAGTATGATTTATCTAGCTTGCTTGTTTAGTTGATATATAGCCTTATTCTGTCTTTATGCCTACTTGCTTATGCCCTAGGAGGCTAGGACTGATAAAGAAGGCCATTTAAACTTTGGTTCGTTACTTGTCCTCCTTGCAGCTTAATTAGTCACTAGTGACTCAAGTATGTAAGGAGACAAACATTATAGTGGCTTCCTTGCTGGTGGGCAAAACAATACCAACTATGCTGGATTGCTGGTTTATAATGTATGGTGATATTGAAGTATTGAACTGTATGCTATACTGACTAGAAAGCAAGTTGCAACTATAATAAGATTTAATAGTACACACATACTATGCACATAAGCATATAGGCATTGAAAAGCTTCATACAGATGGTCAATATTGTCCCCAAAAGGTTGTCTGGCATTACCCTATTTAAAACCGTTTGAAAAGAACTGGGAGCAGAGGCCTTGCTTACGTCACAGGATGGAAGCACTGATTCCTTTGTGTAGATTGGGACTGCATGCCGTTTATTAGTTAGGTCTATGCAGCAATTGTTCCCATTGGATGTGAGAATGGTTAGTTGCTTACAGCTCCTGGCAAACTACAATGATTTTATAAGTACAATTGGACCATTTGGTATGATTCAAACTGTCTGTAAGAAATTGGGCATTTGGACATGCAAAGTTTGAGGGATGAAACAAAGTTCACATTTGCATTAACCTTTTTAAGATCTTATAAACATTTACGGTGTTATTTGTATATATTAGCACACCACCATCAGATCACTGATTAGAATTTTTTTCCATGTATTGTTTTAAGGCAAGCACTTTTAGCACAGTCAAGGTGAGCAATGTGTCACTGAAAGCATCACTGCGAGATGTAAAGGAATTCTTTTCCTTTTCTGGTGACATTGTGCATGTTGAAATGCAAAGGTCAGTGCCATTTTCATGTTGCTTGTTTTCCACATTTGTACCATGAATTGCAATAACCTTTTAGTGCTTTGCAGCAGTGATGAGCTGTCTCAAGTTGCCTACATTACTTTTAAAGACAATCAAGGATCTGAGACGGCTATGCTTCTTACGGTATTCTTTCTCACATCAATGGAAATATAAGTTTTCCATTGGTGCCCTTGTATTGTTCAGAGATTGTGCACAGATTGATGGTTGAAGACATACTTGATGAATGTGGTTGACCAGCTTCATTAACCTAAACCTTTTTGGGGTATGAAACAAAATACACTGCAGATTATAGGGAAAAAACTCGAACGACAGGGAAAAGACCGCCCCCACGGCTTTTCCTAAGAAGAAACTCAGCCACAGTCAGCTGAGAAAAAGGCCACGAACCCTGGCCCCTTGATACGTTGATACTCCCCTCGGGCCTTAACCCGTGCTTTGAGGCCCTTGCTCCATACACAAACACAAGGGCCCACCCACCATAGGCCATTTCTTATTTTAACCAAGGGGCCAGCGAGTGACCTTTTTAAACCAACTCTGAAAATTCATTCCTGAGGGGAGTCGAACCCTGGCGCTGGTAGGTGCTACTGCAGTGCTGCAACCACTAGGTTATAGACTCATCAGCACACACTGCAGATTATTGCCCTGGCATTCTCATATCCTAACAAAAAATGGTCTGAAAAATATTGTTTGATTGATTTAAGAGAAATACTTTGTTAAGACTTGCAAAAAAGGATACCTAAGTTACATTAAGGAAACCTTAATGATATACCAAATTTCCAGACTTGCTTGTTGAATTCTGCCATTTACATAATCCAGAATCCAACTAATATTTTAATATCTACTAGGAAAATCCTGAGCTTTTGATATGAAGGATAATTTATTTGCAAAAATATAATTGGTCACATTACTATGTCCTTATATGCTGCCTAATCATATATCCCTGCTGGAACAGCTTATGTATTCGAAAATTTGTAACATATATTTTGTTGTTGTCCCAGGGTGCCACAATAGTTGATATGGCTGTCATTGTCACGCCAGCTACCGATTATGAGCTACCAGCTTCTGTTTTAGCTGCTCTAGAGGTACAATTAGAACTGCAGTATATTTACAGTCTGATATGATATTCTTCTGGTGGTAATATAACTCCATAGCATGCTTTGCAGCCCAAGGATAGTAAGCCTTCTGCCCTTCAAAAGGCAGAGGACATTGTTGGGACCATGCTGGCCAAGGGATTCATTTTAGGTAGGGATGCACTGGACAGAGCAAAAGCCTTGGATGAGAAGCATCAACTCACATCAACTGCAACTGCTAGAGTATCTTCCTTTGACAAGAAAATGGGTTTAAGCGAGAAGATCAGTGTTGGCACTTCGGCTGTAAATGATAAAGTGAAGGAAATGGATCAGAAATACCAAGTCTCTGAGAAGACAAGGTCAGCACTGGCAGCTGCTGAACAGAGTGTCTCTACTGCTGGATCTGCCATCATGAAGAACAGGTATGTCCTTACTGGAGCAGCATGGGTAACTGGTGCTTTCAATAAGGTTGCCAATGCTGCAAATGATGTTGGCACAAAAGCAAAGGAAAAAATAGCATCTGAGCAGGAGCACAAGACTGTAGAGCTTGAGTCTGCAGAACCTAACAGCTCAGAAGGCCATGGAACACAAAAGGATGTGGATGGTGAATTCGCCAAGATACAGGTCTCTGAATCCCCTGAAGATATTCCCATCTCTACGACTGCAACCGTCCCCATTACTGATGAGGATTCCAGTCAGGCGTCTCCACCTGCCGCCTCTCCCAAAAAGCCAGAACCTGCGCAGGGGTTGATACTATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA014439