BGIOSGA014440

From RiceWiki
Revision as of 03:58, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA014440| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA014440, complete gene.| tag = OS04G05...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA014440

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA014440, complete gene.

LocusTag

OS04G0594100

Ensembl Transcript ID

BGIOSGA014440-TA

Ensembl Protein ID

BGIOSGA014440-PA

Length

1323

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:28890217..28891539

Sequence Coding Region

28891401..28891539,28891165..28891294,28890217..28891060

Genome Context

<gbrowseImage1> name=IndicaChromosome04:28890217..28891539 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:28890217..28891539 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGGGAAGGGCCGGGCACCGTGCTGCGCCAAGGTGGGGCTGAACAAGGGGTCGTGGACGCCGGAGGAGGACATGAGGCTCGTCGCCTACATTCAGAAGTACGGCCACGCCAACTGGCGCGCCCTGCCCAAGCAAGCAGGTTTGCTCCGGTGCGGGAAGAGCTGCCGACTCCGGTGGATCAACTACCTCCGGCCGGACCTCAAGCGCGGCAACTTCACCGCCGAGGAGGAGGAGACCATCATCAAGCTTCACGGCCTTCTCGGCAACAAGTGGTCGAAGATCGCGTCGTGCCTGCCGGGGAGGACGGACAACGAGATCAAGAACGTCTGGAACACGCACCTCAAGAAGCGGGTGTCGCCGGAGCAGAAGAAGGGTGGGGGCAAGAGCAAGAAGAAGACGACCTGCACCGACGTGCTCGTCCCGTCCCCATCGCCGTCGTCGTCCACCACCACCACGACCAACTGCTCCAGCGGCGACTCAGCCGGCGAGCAGAGCAACACGAGCAAGGAGGAGGAGGAGGAGACGGACAAGATCGAGATCCCCATGCTCGAGCTCGACCCCTGCTGCTTCGACTTCGACATGCTGGTTGACCCCGTTGTCCCGGACACGTACTGCCCCGCGGTGTCGGCGTCGGCGTCGGCGTCGGCGCCGACGTCGCCGTGCTCGTCCACGTCCCCGTCGTGCGCCCGTGCAGGCGTGGACCCGCTGCTCGACCTGCCCGAAATCGTGGACCTCGGGCCGGAGCTATGGAGCATCATGGACGGCGGCGCCGGCGACGGGTGCACCGAAGCGCCGCCGCCGGCGTGGAGCAATGCGGCGGCGGCGGCGGCGGCCAATGCAACAGTGGCCACCACGACCAGCCTGGAGGAGGAGGGGAAGGAGTGGTGGTTGGAGGACTTGGAGAAGGAGCTCGGGCTGTGGGGGCCCACGGACGACTACCACTGCCACCCGGGCCCACAAGGTCAGCCCGGTCGCGCGGGCCCACCACCCTCCGCCGTCGTGGAGGACCCAGTGTCGTGCTACTTCCAAGCGGGCCCCACGGCAGCCGCCACGTGGCAGGGACACGAGCCCTCGGCTGTCATCACGAGTAACCCCATGGATTACTACGTGTAA</cdnaseq>

Protein Sequence

<aaseq>MGKGRAPCCAKVGLNKGSWTPEEDMRLVAYIQKYGHANWRALPKQAGLLRCGKSCRLRWINYLRPDLKRGNFTAEEEETIIKLHGLLGNKWSKIASCLPGRTDNEIKNVWNTHLKKRVSPEQKKGGGKSKKKTTCTDVLVPSPSPSSSTTTTTNCSSGDSAGEQSNTSKEEEEETDKIEIPMLELDPCCFDFDMLVDPVVPDTYCPAVSASASASAPTSPCSSTSPSCARAGVDPLLDLPEIVDLGPELWSIMDGGAGDGCTEAPPPAWSNAAAAAAANATVATTTSLEEEGKEWWLEDLEKELGLWGPTDDYHCHPGPQGQPGRAGPPPSAVVEDPVSCYFQAGPTAAATWQGHEPSAVITSNPMDYYV</aaseq>

Gene Sequence

<dnaseqindica>1..139#246..375#480..1323#ATGGGGAAGGGCCGGGCACCGTGCTGCGCCAAGGTGGGGCTGAACAAGGGGTCGTGGACGCCGGAGGAGGACATGAGGCTCGTCGCCTACATTCAGAAGTACGGCCACGCCAACTGGCGCGCCCTGCCCAAGCAAGCAGGTAACGCATCGCCGCCGCAGAGAGAGCAGCTTGTTGTTGTCGTTGCAGAGGTGGAAGAAAGAGCAGGTTCTGATGAATCGTGGGTGTTTTTTTTTGTCGTGTGAAGGTTTGCTCCGGTGCGGGAAGAGCTGCCGACTCCGGTGGATCAACTACCTCCGGCCGGACCTCAAGCGCGGCAACTTCACCGCCGAGGAGGAGGAGACCATCATCAAGCTTCACGGCCTTCTCGGCAACAAGTACGTACGCCGCTGTAGCCATGGGAATTTCGAGTGCGATTCTTGATTTGAATAAGTTGGATTCCGTGCGCTGATTGTCTGAGTTTGTGATCGAATTTTCTCAGGTGGTCGAAGATCGCGTCGTGCCTGCCGGGGAGGACGGACAACGAGATCAAGAACGTCTGGAACACGCACCTCAAGAAGCGGGTGTCGCCGGAGCAGAAGAAGGGTGGGGGCAAGAGCAAGAAGAAGACGACCTGCACCGACGTGCTCGTCCCGTCCCCATCGCCGTCGTCGTCCACCACCACCACGACCAACTGCTCCAGCGGCGACTCAGCCGGCGAGCAGAGCAACACGAGCAAGGAGGAGGAGGAGGAGACGGACAAGATCGAGATCCCCATGCTCGAGCTCGACCCCTGCTGCTTCGACTTCGACATGCTGGTTGACCCCGTTGTCCCGGACACGTACTGCCCCGCGGTGTCGGCGTCGGCGTCGGCGTCGGCGCCGACGTCGCCGTGCTCGTCCACGTCCCCGTCGTGCGCCCGTGCAGGCGTGGACCCGCTGCTCGACCTGCCCGAAATCGTGGACCTCGGGCCGGAGCTATGGAGCATCATGGACGGCGGCGCCGGCGACGGGTGCACCGAAGCGCCGCCGCCGGCGTGGAGCAATGCGGCGGCGGCGGCGGCGGCCAATGCAACAGTGGCCACCACGACCAGCCTGGAGGAGGAGGGGAAGGAGTGGTGGTTGGAGGACTTGGAGAAGGAGCTCGGGCTGTGGGGGCCCACGGACGACTACCACTGCCACCCGGGCCCACAAGGTCAGCCCGGTCGCGCGGGCCCACCACCCTCCGCCGTCGTGGAGGACCCAGTGTCGTGCTACTTCCAAGCGGGCCCCACGGCAGCCGCCACGTGGCAGGGACACGAGCCCTCGGCTGTCATCACGAGTAACCCCATGGATTACTACGTGTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA014440