BGIOSGA014441

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Revision as of 03:58, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA014441| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA014441, complete gene.| tag = OSJNBA0...")
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Gene Name

BGIOSGA014441

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA014441, complete gene.

LocusTag

OSJNBA0006A01.10

Ensembl Transcript ID

BGIOSGA014441-TA

Ensembl Protein ID

BGIOSGA014441-PA

Length

4898

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:28882118..28887015

Sequence Coding Region

28886668..28887015,28885492..28886200,28884835..28885220,28884336..28884535,28884068..28884209
,28882473..28882723,28882283..28882371,28882118..28882179

Genome Context

<gbrowseImage1> name=IndicaChromosome04:28882118..28887015 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:28882118..28887015 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCAGCAGCATCCGCCGTCGCCTCGTCGTCGTCGTCACCGGCTCTGGAGCCCCACCCCGACCTCTCCCCGGTATTCTCGTCGCCGTCCGCGGCTTCCTCCTCCTCGTCCTCGTCGCGCGACGAGGGAGCGCGCGGGGTCTCGTGCGAGGGGGGCGGCGGTGATGACGTGTTCGACCTGGACGCCCCGTGGGTGGCGGCGGCCGAGGCGGAGTCGAGGCTGGAGGAGGCCGTGACGGTGGCGGCCGCGGCGCGGGTTGGTCTCTGCTGCACCGAGGAGAAGGGGAAGGGGAAGGGGGAGAAGGAGGAAGATGAGATACGAGACAACCGGCAGCGGCAGGAGGACGAGCTGATGGCTTTGGAGGCAATATATAGTGATGATCTGGCTGTATTCGGAAAGAAAGGGGGGCTCCACTATTTCGAGGTTCTTTGTGTTGGTCATCACTGTCGTTTCTACTGTTCTTGGATGGTGGAATTTTGTTTTGATGGTTTGCCTTCTGTGTTCGAGATTTACATACATTACGATTTGAATGATGGCGCTGAAGTGTGTGCTAAGCTTTCTTCAGCTAATGAGAAAAATCCAAAAGATGGAAGATGTTGCGTTGGAATAGAAGGGCATGGTGACGAACCAGAAGATTTTTCTTACACTTGTAATTTTGAGTACTTGCCTCCTTTGGTCTTGACATGCTTGCTTCCACTGTCCTATCCTAGCAAAGAACCCCCATATTTTACAGTCACTGTTAAGTGGATGGATGGGCCTAATGTTTCGCAGCTCTGTAAGATGCTTGACACCATTTGGGCAGAGTTACCAGGGCAGGAAGTGGTATACCGGTGGGTTGAGTCGCTAAGAAATTCTTCTCGGTCATATCTCTGGTTTGATGGAAAAATAACGTTAGGTCCAGATACTCCAATGCAGAAAGGAGATAATCGTGCAATCTCAAGAAGTCTCTCCTTGGAGTCTGTAATTCCATCCATGCTCAGTTACAGTAGTAAGAAGCGCTATCAAGCATTTCTTGAGGATCTCCACATGTGCATGATATGCCTCAGCCAGAGCAAAGGTTCAAACTTCATCAGGCTTCCATGCCAACACCTCTTTTGTGTGAAGTGCTTGGGGACGTTATGCAGGATGCATGTCAAGGAAGGTAGTGTGTTTCAGTTGGTATGCCCTGATACCAAGTGCAATGCTTCAATTCCACCCTATGTGTTGAAGAGACTTCTTACAGAAGATGAATTTGAACGTTGGGATAGGCTTACTCTTGAGAAAGCACTGGACTCCATGTCAGATGTGGTTTACTGTCCAAGATGCGTGATCGGTTGCTTGGAAGATGAGGATAATAATGCACAATGTCCAAAATGCTCCTTTTTCTTCTGCTCGTTTTGTAAGGAGCCATGCCATCCTAGGAGGCAGTGCTTGACTCCAGAGGAAAAGCTCCAGCGCCGGCAGGCGTCAGGGAGGATGTCTGAGAGAGAGGTGGCACAGGAAATACTGAACATCAAAGCATTATATAATGATGTCCGATTATGTCCAAAGTGCCGAATGGCCATCAGCAAAACTGCAGGGTGCAACAAAATGGTGTGCGGCAACTGCAGTCAGTTCTTCTGCTTCCGCTGTGGCAAGGCCATAAAGGGTTATGATCATTTCAGCGAATGTAAGCTCTTTGCGCCTAGAGACATATCAGCGTGGGAGAGACAAATGGAAGAGCAGTATGGAAATCATGTACGGCTTTCACTGCGCCCTGTAGGCGGTACAATCAGGTGTCCAAAATGCCGTGAAAGAAATTTCAAGTCCGCATTCGATATTCAGACGGTGCAATCAGCAAAGCCTGCAACCATGAAGAAACCCACACGCCAAATGGTGCCAGCCCTCGCCATCCTGGCTCTCTCCGTCGCCGGTCTCGCCGTCGCCGCCGCCGCGGCGCCGCCCACCCGGAGAGGGCAGGAGGTCCACCTGTTCGAGGCCACGGTGCGCGTCGCCGACGACGGCGTGGAAGATCCCGACGAGTACAACTACCGGTTGCTCGCCACCGTGCTCGGCAGCGTCGAGGCAGCTCAGAGCGTCACGTATGAGACTTACCCTGGGACATTCAGTGCGTTCCTCACGAACAACCAGGCCCGGAGATTGTCCAAAGTACCGGGGGTGCTGGAAGTTAGGCAAAGGGACGATCCTGTGCCTACGGATGGACAGTGA</cdnaseq>

Protein Sequence

<aaseq>MAAASAVASSSSSPALEPHPDLSPVFSSPSAASSSSSSSRDEGARGVSCEGGGGDDVFDLDAPWVAAAEAESRLEEAVTVAAAARVGLCCTEEKGKGKGEKEEDEIRDNRQRQEDELMALEAIYSDDLAVFGKKGGLHYFEVLCVGHHCRFYCSWMVEFCFDGLPSVFEIYIHYDLNDGAEVCAKLSSANEKNPKDGRCCVGIEGHGDEPEDFSYTCNFEYLPPLVLTCLLPLSYPSKEPPYFTVTVKWMDGPNVSQLCKMLDTIWAELPGQEVVYRWVESLRNSSRSYLWFDGKITLGPDTPMQKGDNRAISRSLSLESVIPSMLSYSSKKRYQAFLEDLHMCMICLSQSKGSNFIRLPCQHLFCVKCLGTLCRMHVKEGSVFQLVCPDTKCNASIPPYVLKRLLTEDEFERWDRLTLEKALDSMSDVVYCPRCVIGCLEDEDNNAQCPKCSFFFCSFCKEPCHPRRQCLTPEEKLQRRQASGRMSEREVAQEILNIKALYNDVRLCPKCRMAISKTAGCNKMVCGNCSQFFCFRCGKAIKGYDHFSECKLFAPRDISAWERQMEEQYGNHVRLSLRPVGGTIRCPKCRERNFKSAFDIQTVQSAKPATMKKPTRQMVPALAILALSVAGLAVAAAAAPPTRRGQEVHLFEATVRVADDGVEDPDEYNYRLLATVLGSVEAAQSVTYETYPGTFSAFLTNNQARRLSKVPGVLEVRQRDDPVPTDGQ</aaseq>

Gene Sequence

<dnaseqindica>1..348#816..1524#1796..2181#2481..2680#2807..2948#4293..4543#4645..4733#4837..4898#ATGGCAGCAGCATCCGCCGTCGCCTCGTCGTCGTCGTCACCGGCTCTGGAGCCCCACCCCGACCTCTCCCCGGTATTCTCGTCGCCGTCCGCGGCTTCCTCCTCCTCGTCCTCGTCGCGCGACGAGGGAGCGCGCGGGGTCTCGTGCGAGGGGGGCGGCGGTGATGACGTGTTCGACCTGGACGCCCCGTGGGTGGCGGCGGCCGAGGCGGAGTCGAGGCTGGAGGAGGCCGTGACGGTGGCGGCCGCGGCGCGGGTTGGTCTCTGCTGCACCGAGGAGAAGGGGAAGGGGAAGGGGGAGAAGGAGGAAGATGAGATACGAGACAACCGGCAGCGGCAGGAGGACGAGGTCTGGTACACTGATCTACTGATCGGATCAGGAAATTTCAATAATTTGTTGATTTTGGTCTGTGCTTTGGTGAATTTTCTTGCAATGGGGTTGCTGTATTCGTAGTCTCGTGTGATATTGAGCTGGGAACGTTTGGAATTGCAGGGTTTTGGGCGAGGGTTTTGCACAAAGTTGCGATCTTTTTTCCCCTTCGAGAGGAAAAAAAATGCAGGCTTTCGCTTTCAATTTGAGGAAGCGATCCAGAGATCATTAGCATATAAACTGCGTTGAGGAAAAGGAGCTGGTTATACGCTTTGCATGCGATTTTGTAATCATTTAGTTCTTTACAGAAGAAAAGAAATCATTTTTAGTGGGGGAACCAAAGGAGGAATTGTTGTACTCTGTAGGTTTTCTATTGAACCGATAATAGTTACATTTCATCGTAATAAGGGTACTGCTTGTTTACTTGATGTGACCATTTGTTGCAGCTGATGGCTTTGGAGGCAATATATAGTGATGATCTGGCTGTATTCGGAAAGAAAGGGGGGCTCCACTATTTCGAGGTTCTTTGTGTTGGTCATCACTGTCGTTTCTACTGTTCTTGGATGGTGGAATTTTGTTTTGATGGTTTGCCTTCTGTGTTCGAGATTTACATACATTACGATTTGAATGATGGCGCTGAAGTGTGTGCTAAGCTTTCTTCAGCTAATGAGAAAAATCCAAAAGATGGAAGATGTTGCGTTGGAATAGAAGGGCATGGTGACGAACCAGAAGATTTTTCTTACACTTGTAATTTTGAGTACTTGCCTCCTTTGGTCTTGACATGCTTGCTTCCACTGTCCTATCCTAGCAAAGAACCCCCATATTTTACAGTCACTGTTAAGTGGATGGATGGGCCTAATGTTTCGCAGCTCTGTAAGATGCTTGACACCATTTGGGCAGAGTTACCAGGGCAGGAAGTGGTATACCGGTGGGTTGAGTCGCTAAGAAATTCTTCTCGGTCATATCTCTGGTTTGATGGAAAAATAACGTTAGGTCCAGATACTCCAATGCAGAAAGGAGATAATCGTGCAATCTCAAGAAGTCTCTCCTTGGAGTCTGTAATTCCATCCATGCTCAGTTACAGTAGTAAGAAGCGCTATCAAGCATTTCTTGAGGATCTCCACATGTGCATGATATGCCTCAGCCAGAGCAAAGGTAAGCTCCTACAAAACACCATCCTTCTCACATTGCAATCATACGAACCAAATTCGCTCCATGCCTTTCATTTGTTGAATCTGTGCCATAGCTGTAACAATTAACTGGCTGAAACTTTCATGCTTCACACATTAATTGTAATTGTGTGCTAATAAGGCCCAATGAACCTGTTATTTCACCGGTTTATTTCTAAGATTTTTCATAGGAAACTGAACACGCTCAATCTGAAGTTCTTTTCCCTGTAAACTAACTTAAGTTTTGAAACAATTAGGTTCAAACTTCATCAGGCTTCCATGCCAACACCTCTTTTGTGTGAAGTGCTTGGGGACGTTATGCAGGATGCATGTCAAGGAAGGTAGTGTGTTTCAGTTGGTATGCCCTGATACCAAGTGCAATGCTTCAATTCCACCCTATGTGTTGAAGAGACTTCTTACAGAAGATGAATTTGAACGTTGGGATAGGCTTACTCTTGAGAAAGCACTGGACTCCATGTCAGATGTGGTTTACTGTCCAAGATGCGTGATCGGTTGCTTGGAAGATGAGGATAATAATGCACAATGTCCAAAATGCTCCTTTTTCTTCTGCTCGTTTTGTAAGGAGCCATGCCATCCTAGGAGGCAGTGCTTGACTCCAGAGGAAAAGCTCCAGCGCCGGCAGGTACAAAATGAAATATATCCAGTGAATTCTTTTCTATATTAGCAGTTGATTGTCATTCTAGTAGTAGTGATCTGTTAATCTCCGATAAACATATCTGATGGTTCATCAGTAAATCCTTCAATGATATACAAATTATGAGTACTTGGTGAGAAATCTCATCAAAACTATTTCAAGGGTACCATACAGAATACGCTTTTGGCACCTTTGTGCTACAGAGTTATTCAATGAGTTGCAAAATGCTGACATTATACTCTAGGGACATTTTTCCTTTTATTGACTTACTTGTTTCATGTTTGCAGGCGTCAGGGAGGATGTCTGAGAGAGAGGTGGCACAGGAAATACTGAACATCAAAGCATTATATAATGATGTCCGATTATGTCCAAAGTGCCGAATGGCCATCAGCAAAACTGCAGGGTGCAACAAAATGGTGTGCGGCAACTGCAGTCAGTTCTTCTGCTTCCGCTGTGGCAAGGCCATAAAGGGTTATGATCATTTCAGGTAGGCCATCAACTGTAACTTCTAAAATGAAGTATCCCTTATCTTGGAAACAGGGGAAGGCATCCAGGATATTTGAGCTGTATATATCTATGCATGTATGGTTTGACAAGCTCTTGCCCATTGCAGCGAATGTAAGCTCTTTGCGCCTAGAGACATATCAGCGTGGGAGAGACAAATGGAAGAGCAGTATGGAAATCATGTACGGCTTTCACTGCGCCCTGTAGGCGGTACAATCAGGTGTCCAAAATGCCGTGAAAGAAATTTCAAGGTAAAGAAACCTATCTTCTCCATCTATTCATGAGGCATGAATGTTGCAGCATTTGGTAAATTTCCCTGCGTATACATCTAACCAATGACAATACGCATCCAGGATGATGAGAAATATATCTTCTGCTGGGCATGCCGAGCCAGGACAAGAGGGGGCACTTTGGGTCACCGGAATGCGTGGGGCTTGAAGATTTCTAGCATCTGATCTGTGTACTCCTATGGTCACATTTTTACAGTTTACGAAGTTAGCTGTTATGTCAAATGCTCAATCTGACGTCGTGTGTAATCGATTGATGAGAACCATATACTCCTATCTAAAAGCTGCAACAAGAGTTGTTGTCACCTTTACCTTATATTCATGCATGGTTAATTTATACTCCATTTTGCTGACATGTTCTGTTTCATTGGCAAGTGCAACAAAAGCACCTGTAATCTGTGTGATCAGCACTCGTGCCAACAGTTCTTACAATATATGAGCAAGGCTTGAGAATTGAGAGAGTTTATTGCTTATTACTCCCTCCATTCTAAATTGATCTACATAAAGTTTTTTTTGAGGTTATTCCTAAATGATTTATATATTTGTGTTCATTCATTAAGTATATTCGTTATTTGTGCATTTGGAGTAAATGGACATTGATGCATGCATCCATGCACACAAGTATTTATAACCCACATACAATATCTTGATTTGTCATTGGCTAGAAAATAGTGGGGATGGTACATGCATCGAGTTTGTTGCTAGAGTAAGGCCCTGTTTGTTTCAGCTTAAGATTATTATAATCTAGATTATTAAATCAGATTACTCTAAGCTGGATTATAATAAGCTGACATAGAATAAGCTGAGCTGTTTGTTTCTCTAGATTATGAAGGCATCTAAGGGTAGTGGGTCTTTAGCCACCCAATAATATGAAAAAAGCTCCTCCACAGGAGATTATTAGATTATAGAAATCTGGCTTATAGATTATAATAATCTATCATAATAATCTACTTGTTTGTTTCAGCTTACTCCTAATAATTCAGATTATAATAATCCTAAGCTGAATCAAACATGACCTAAATATTTTAGTATGAGAGAGTTATTATTTTTTCTTGGTCTTGGTGTATCTATGAAATATTTAGATCAATTTGGAATGGAGGGAGTATGTATGAGTAGTAGGTAGTAACACACGCAGCTAGTCAGCTACACCCTACAGATCTGCTATTTGCAGGCTATCGCATTGATCTACAGCTCCTGGAAACGTCAGTTGCCGTGAATGATCTTAATAAGCGTCGTGTAACAGCTGAAACTCTTGAAGGAGATTATGTCTGTTAATCCATCAAACACACTATAAAAAATGGCCAAAAGTCCGCATTCGATATTCAGACGGTGCAATCAGCAAAGCCTGCAACCATGAAGAAACCCACACGCCAAATGGTGCCAGCCCTCGCCATCCTGGCTCTCTCCGTCGCCGGTCTCGCCGTCGCCGCCGCCGCGGCGCCGCCCACCCGGAGAGGGCAGGAGGTCCACCTGTTCGAGGCCACGGTGCGCGTCGCCGACGACGGCGTGGAAGATCCCGACGAGTACAACTACCGGTTGCTCGCCACCGTGCTCGGCAGGTCGCCTTCTGCTTCTCTGATATGAGCTCCATTGTTCACATCATTTTGCTTCTTCTTTCTTTTTTTTTTTTCTGACGGTGATCTCCATTTTTCGCATGAAGCGTCGAGGCAGCTCAGAGCGTCACGTATGAGACTTACCCTGGGACATTCAGTGCGTTCCTCACGAACAACCAGGCCCGGAGATTGTCCAGTGAGTGAAATTCATACCGCTACAGCTCCAAATTTTCGAATAGAGTAGATGATTTATTAGATTACTGATGTATGCATAATCTGTTCGTGATTTCATTTGACAGAAGTACCGGGGGTGCTGGAAGTTAGGCAAAGGGACGATCCTGTGCCTACGGATGGACAGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA014441