BGIOSGA014445

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Revision as of 03:58, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA014445| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA014445, complete gene.| tag = OSIGBA0...")
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Gene Name

BGIOSGA014445

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA014445, complete gene.

LocusTag

OSIGBA0142I02-OSIGBA0101B20.18

Ensembl Transcript ID

BGIOSGA014445-TA

Ensembl Protein ID

BGIOSGA014445-PA

Length

6037

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:28839594..28845630

Sequence Coding Region

28845283..28845630,28844435..28844617,28844083..28844232,28843396..28843598,28843023..28843308
,28842808..28842942,28842578..28842696,28841800..28841956,28841457..28841703
,28841295..28841371,28840704..28840823,28840274..28840404,28840026..28840200
,28839594..28839938

Genome Context

<gbrowseImage1> name=IndicaChromosome04:28839594..28845630 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:28839594..28845630 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCTTCGTCGCAGGGCCTCAAGAAGAACTACCGCTGCGACCGCTCGCTGCAGCAGTTCTACACGGGCGGGCCGTTCGCCGTCGGGAGCTCTCCCGGAGGCGGCGAAGGCGAAGTCGAAGGAGGCGAGGCCGAGGCCGAGGCGTTCCTCGCGTGCGCCTGCGGCGGGGAGGTGCGCCTGGTGTCCGCCGCCGACGCGTCCGCCATCGGGGAGCCGATCGAGGGCGAAAACGAGGCCGTCACGGCGCTCGCGCTGTCCCCCGACTCCCGCCTCCTCTTCACCGCGGGGCACAGTAGGCTTATTCGAGTCTGGGACCTCGCGTCCCGCACTTGCACACGCAGCTGGAAGGGGCATGATGGTCCTATTAGGGCCATGGCCTGCCATGCTTCTGGTGGGTTGCTTGCAACTGCTGGAGCAGACAAAAAGGTGTGCGTTTGGGATGTTGATGGTGGGTTTTGCACACATTTCTTTAGAGGCCACGCAGGTGTTGTGACGACTGTTATGTTCCACAAAGATCCGAAGCGCCTTCTGCTATTTTCTGGAAGTGAAGATGCCACTGTGAGAGTTTGGAACCTTGAAAGCAAAACTTGTGTCGCTGTGCTGAAAGAGCATTTTTCAGCTGTGACATCATTAGCCTTATCTGAAGATGGACAAACATTGCTTAGTGCTGGGCGGGATAAGATTGTGAATGTGTGGGATGTTCGTAAGTACAACTCAAAGAAGACAATACCAGCATTTGAAATGATAGAAGATGTTTCCTTCATTGGACCAGGAAGTAATTTATTGTCTTGTTTGGGTGAACCGGCAAATATAAAACGCAAAACAGATGGTTATTTTCTTACGGTTGGTGAACGTGGAGTAGTTCGCATCTGGTGCTTGGAAAGTGCTCAGTGTATATATGAGCAGCAATCATCCGATGTAACCATTAACACAGAGAATGAGGAGTCTAGAAGGGGTTTTACTTCTGCTGTTATGTTGTCAGATGATCAAGGACTGCTATGTGCCACTGCCGATCAGCAGTTTTTGTTCTACTGTCCCACGAGAACTGACGGAGGGGACTTCCAGCTGAACTTATATAAACGCCTAGTAGGTTATAATGATGAGATTCTTGATTTGAAGTTTGTTGGGGAGGATGAACAATATCTTGCTGTAGCTACTAACTTGGAGCAGGTCCGTGTTTATGACGTTGCATCGATGTCATGTTCTTATGTGCTGTCTGGCCACACTGAAATTGTTGTTTGCATCGACACTTGTATTTCTTCTTCTGGGAAGACACTTGTTGTGACTGGGAGCAAAGATAGCACTGTGAGACTCTGGGATATGGAAAGGAGAAGCTGCATTGGTATTGGTAAAGGTCATCTGGGAGCTATTGGTTCCGTTGCATTCTCAAAGAAATCTAAGAATTTTTTTGTTAGTGGAAGCAGTGATCGGACCATCAAGATATGGAGCTGGGATGATACACTTGATGATGTTGGCAGTGAAGTTCCTCTCAAAGCAAAAGCTGTTGTAGCTGCACATGACAAAGATATTAATTCTCTTTCTGTCTCGCCTAATGACGGTCTTGTTTGCAGTGGTTCTGAGGACCGTACTGCATGCATATGGAAACTTCCAAACTTAGTGCCCTCTGTTGTCCTTAAAGGGCATAAAAGGGGCATTTGGTCAGTCGAGTTTTCTCCTGTGGAGCAGTGTGTCATTACATCATCTGGTGACAGAACAGTCAAAATATGGGCTGTTGCTGATGGTTCATGCTTGAAGACATTTGAGGGCCATACATCTAGTGTTTTACGAGCCTCATTCCTTTCACACGGGACCCAATTTGTTTCTTGTGGAAGCGATGGCCTTGTTAAGCTATGGACCATCAAAACAAATGAATGCATTGCTACTTTCGATAAGCATGATGGGAAGGTTTGGGCACTGGCTGTTGGCAAGAAAACTGAAATGCTTGCTACTGGCGGAACTGATGCTGTTCTTAACCTTTGGCATGACTGTACCATGGAAGATAAACAGGAAGATTTTCGTAAAAAGGAGGAGGAACTGTTGAGAGGTCAGGAATTAGAAAATGCAGTATCAGATTATGACTATGCAAAAGCAATACAACTTGCATTTGAGCTTAGAAGACCCCACAGGCTTCTTGAGTTATTCACACAGCTTTGCAGGGAGTCTGATCTGGAGGACCCAATAGAAAAAGCCCTTATTGGTCTTCCAAAGGAAGGGCTTCGCGTACTTCTTGAGTATATCCGGGAATGGAACACAAAACCTAAGCTTTGTCATGTTGCACAGTTTGTGCTTTTTCGGGTATTGAGGAGCTTGCCTCCCACTGATATCCTGGAGATAAAGGGCATCAGTGAGCTCCTTGAGGGACTTATTCCATATTCACAGAGGCATTTCAGCAGAGTTGATAGACTAGTACGAAGCACATTTTTATTGGACTACACCTTGACCCGGATGTCTGTTGTAGATCCGGACATAGATGAGGGCACAACCAGAGATGACGCAAATGGCTCATCAGTAGAGAATTGTGAAATTGCACAGGCGAAGCCTGATGCATTGGTAGCAGAAGAGAACTTGCAAAAGTCGGTAAAGAAAAGAAAATCAAGCAAATCAAGCAAAAAAGGCGGTAAGAAGGTGAAGATTGCGTCCACGGGGGGCAGTAAGGATGTTCCTATTGAGGCTTAA</cdnaseq>

Protein Sequence

<aaseq>MASSQGLKKNYRCDRSLQQFYTGGPFAVGSSPGGGEGEVEGGEAEAEAFLACACGGEVRLVSAADASAIGEPIEGENEAVTALALSPDSRLLFTAGHSRLIRVWDLASRTCTRSWKGHDGPIRAMACHASGGLLATAGADKKVCVWDVDGGFCTHFFRGHAGVVTTVMFHKDPKRLLLFSGSEDATVRVWNLESKTCVAVLKEHFSAVTSLALSEDGQTLLSAGRDKIVNVWDVRKYNSKKTIPAFEMIEDVSFIGPGSNLLSCLGEPANIKRKTDGYFLTVGERGVVRIWCLESAQCIYEQQSSDVTINTENEESRRGFTSAVMLSDDQGLLCATADQQFLFYCPTRTDGGDFQLNLYKRLVGYNDEILDLKFVGEDEQYLAVATNLEQVRVYDVASMSCSYVLSGHTEIVVCIDTCISSSGKTLVVTGSKDSTVRLWDMERRSCIGIGKGHLGAIGSVAFSKKSKNFFVSGSSDRTIKIWSWDDTLDDVGSEVPLKAKAVVAAHDKDINSLSVSPNDGLVCSGSEDRTACIWKLPNLVPSVVLKGHKRGIWSVEFSPVEQCVITSSGDRTVKIWAVADGSCLKTFEGHTSSVLRASFLSHGTQFVSCGSDGLVKLWTIKTNECIATFDKHDGKVWALAVGKKTEMLATGGTDAVLNLWHDCTMEDKQEDFRKKEEELLRGQELENAVSDYDYAKAIQLAFELRRPHRLLELFTQLCRESDLEDPIEKALIGLPKEGLRVLLEYIREWNTKPKLCHVAQFVLFRVLRSLPPTDILEIKGISELLEGLIPYSQRHFSRVDRLVRSTFLLDYTLTRMSVVDPDIDEGTTRDDANGSSVENCEIAQAKPDALVAEENLQKSVKKRKSSKSSKKGGKKVKIASTGGSKDVPIEA</aaseq>

Gene Sequence

<dnaseqindica>1..348#1014..1196#1399..1548#2033..2235#2323..2608#2689..2823#2935..3053#3675..3831#3928..4174#4260..4336#4808..4927#5227..5357#5431..5605#5693..6037#ATGGCTTCGTCGCAGGGCCTCAAGAAGAACTACCGCTGCGACCGCTCGCTGCAGCAGTTCTACACGGGCGGGCCGTTCGCCGTCGGGAGCTCTCCCGGAGGCGGCGAAGGCGAAGTCGAAGGAGGCGAGGCCGAGGCCGAGGCGTTCCTCGCGTGCGCCTGCGGCGGGGAGGTGCGCCTGGTGTCCGCCGCCGACGCGTCCGCCATCGGGGAGCCGATCGAGGGCGAAAACGAGGCCGTCACGGCGCTCGCGCTGTCCCCCGACTCCCGCCTCCTCTTCACCGCGGGGCACAGTAGGCTTATTCGAGTCTGGGACCTCGCGTCCCGCACTTGCACACGCAGCTGGAAGGTAACATCTCTTCTGTGAGAACTCGATGTGTTGTGCACTTATGCGGTGATTTCATGTACTGTCTCCAATTTGAATGATGTGCAAGGGATATGGTGAATTCGCCTTACTTTTAGCAATTTCATTGGAGTCATATTTGCGTCCCTGAAAGTATATTGTTGGCTTAACACTCTGTGCTGTGAACTGTTCATATTGTGCGTTTTTATGATACAATACAAATAAGCACACTAGATAAACCTCACAAACCTCTATTTTTGGATTATATTGTGCATTGCTTTGTTTTTATGAATGTGGAACTTATGTAGTGGTGGGACTGTAATACCTTTCCCCCCACCCTCTCCTCTTACCGAGTCGATCCGAATGATGTGCCTCAATCCGTTAGTGAGTGTAATGTTACACATATTAATGACTAAAACGACATGTTATAGTGGTCAGCCAAATTTACTGTCTCCATGTAGATTCAATTAAATGAGAAAAAAAATCTGTTCATCAACTGCTTTTTGCAATCATAAGTTCATCAGAAGTGGGGCTTCCCTGATAACTTTTAACTTCTTTTGCCACTCAAAGTAGTTCACTTCAGTAAATTATTAATTTATTATGGCACATTGGCAAGCTTTTCCCGGTATAACATGTGTGATAAGCTTATGTATTTCTTTTATGACTTACAGGGGCATGATGGTCCTATTAGGGCCATGGCCTGCCATGCTTCTGGTGGGTTGCTTGCAACTGCTGGAGCAGACAAAAAGGTGTGCGTTTGGGATGTTGATGGTGGGTTTTGCACACATTTCTTTAGAGGCCACGCAGGTGTTGTGACGACTGTTATGTTCCACAAAGATCCGAAGCGCCTTCTGGTAAGTAGAAGTACGATATGTGAATGTCATCAATGAAAATGCTCTTTGAGCTTGTTAGGCTAAGCCGCTTGATTTCCATAATCAGATGTACTTGGTTTTAATGATATATTTACTCCAGTGTTGTTTATTCAGTATTCACATCTTCATTGTATTCTTCTACTCTTGGTACTATAAAAATTACCCTTGTTTCTTTGTTCTCTAGCTATTTTCTGGAAGTGAAGATGCCACTGTGAGAGTTTGGAACCTTGAAAGCAAAACTTGTGTCGCTGTGCTGAAAGAGCATTTTTCAGCTGTGACATCATTAGCCTTATCTGAAGATGGACAAACATTGCTTAGTGCTGGGCGGGATAAGGTAAGATTGAGATACTGAATCTCTTCTAATTAATAAAAAAAGCGTTATGTGGCAATGCCTGTCATGTTCCAGCAATACTATAGATGTTGCCTGTGATGCCTCTGTTTCAGTGTTGCATGTTCATATTTTTATTTGCTACCGGAGTTCTAAAATCAGTTGGCATTGATTGGAACAATCATAAATTACAAGGTTTTTTTTGTGCTCTTTGAGTGCATCCATGTACATAAAACTACCCAACCGAATGCAAGTTACTCTCTTAATAAATTCCTAGGCTCTATAACACCATGGTAGGTTTTAGCTGTTCGTATTGCCAAGTTTTAATAAAGAACAAATAGGCTAGTATATCATTGTCCTGTTTATTTTTCTAGATGAGTCCTGTTGACTAGACTTTCAGCATTCTTGATTATATACTCTACTATGTCCTCTGTTTTCTCTTTCTCTCTGGAGCTGCATGCAATTTTGAGTATATATGGAACATCTGCAGATTGTGAATGTGTGGGATGTTCGTAAGTACAACTCAAAGAAGACAATACCAGCATTTGAAATGATAGAAGATGTTTCCTTCATTGGACCAGGAAGTAATTTATTGTCTTGTTTGGGTGAACCGGCAAATATAAAACGCAAAACAGATGGTTATTTTCTTACGGTTGGTGAACGTGGAGTAGTTCGCATCTGGTGCTTGGAAAGGTACGTCAGTCGTTGCATTTTCAGTTCAGTGCTATTTTGCTTAGCTCTGGACTGCATGAAATTGATTGCTTCTTGGTCATTCCACAGTGCTCAGTGTATATATGAGCAGCAATCATCCGATGTAACCATTAACACAGAGAATGAGGAGTCTAGAAGGGGTTTTACTTCTGCTGTTATGTTGTCAGATGATCAAGGACTGCTATGTGCCACTGCCGATCAGCAGTTTTTGTTCTACTGTCCCACGAGAACTGACGGAGGGGACTTCCAGCTGAACTTATATAAACGCCTAGTAGGTTATAATGATGAGATTCTTGATTTGAAGTTTGTTGGGGAGGATGAACAATATCTTGCTGTAGCTACTAACTTGGAGCAGGTGAGTTGCCCCTAAATCTTAGTACAGTTCTTGTGGACATATGTATTTTAGCTTTCTCACACTATTTCCTCCGTATGTAGGTCCGTGTTTATGACGTTGCATCGATGTCATGTTCTTATGTGCTGTCTGGCCACACTGAAATTGTTGTTTGCATCGACACTTGTATTTCTTCTTCTGGGAAGACACTTGTTGTGACTGGGAGCAAAGATAGCACTGTAAGTTGTAGTGGTCTATTCTGACTGAAACTGACATATTTTCCTTTTCTTTTTTTTTGTTTTATTTTTGCAGTCTTTTCTCGTGTTGCATTTGACTTTTGCATTTCGCAGGTGAGACTCTGGGATATGGAAAGGAGAAGCTGCATTGGTATTGGTAAAGGTCATCTGGGAGCTATTGGTTCCGTTGCATTCTCAAAGAAATCTAAGAATTTTTTTGTTAGTGGAAGCAGGTTAGTTTTCAAGTTATTTCTGTTCCACTTTAGATAATCAGTTCCTCTGATTTTTGTATGCTATGTAATTCTGTTTATCTATTGACCAATCGTTATATTCATTTCCTCCAATTATTCATGTTTCTCTGATGCATCATGTTTATTAGCTACTGACAACTCTTGTGAGACTAGGCTTAGTTCTTTTCTTCAACTCCAAACTTCAACTTCCTCATTTTCCGTTAGCACGCTTTTCAAACTGTTAAATGGTGATTATTTTGCAAAAGAAAATTCTATATGGAAGTTGTTTTTAAAAAATCAAATAAATCTATTTTTCAAGTTTATAATAGTTAATACTTAATTCATTATGTGCTAATGAGCTTTCTCGTTTCGTGTGCGTTGCAAATCTTCCTCTAGAGTCGTGCAAAGAACGCATTAATTCAGATGCCATGTTTTGGTTTGATTCTCCCTGTGCATGAGCATAAGTGGCGAGTGTTATGAGGATATCCAACTTTGCCTTAGTAGCAGAACTATTCATGGACTCCTGAGTATTAGTTTTGAGAATAATAGTACCATTTCTCATGTAATTCTTTCCAGTGTTTTACTGTTGACATTGTTCTAAAATTGAGGTTTTCTTGTTATTAGTGATCGGACCATCAAGATATGGAGCTGGGATGATACACTTGATGATGTTGGCAGTGAAGTTCCTCTCAAAGCAAAAGCTGTTGTAGCTGCACATGACAAAGATATTAATTCTCTTTCTGTCTCGCCTAATGACGGTCTTGTTTGCAGTGGTTCTGAGGTTAGATTGCAGTATGTTATACTTAATGGTCATCGGCTTTTTATTTGGCTTAAATCATCGAACTTGTCATTAGATCTCATTACCTTGCTTCTGCAGGACCGTACTGCATGCATATGGAAACTTCCAAACTTAGTGCCCTCTGTTGTCCTTAAAGGGCATAAAAGGGGCATTTGGTCAGTCGAGTTTTCTCCTGTGGAGCAGTGTGTCATTACATCATCTGGTGACAGAACAGTCAAAATATGGGCTGTTGCTGATGGTTCATGCTTGAAGACATTTGAGGGCCATACATCTAGTGTTTTACGAGCCTCATTCCTTTCACACGGGACCCAATTTGTTTCTTGTGGTAAGAAGAAACAGGACAAATTCTTAAGGTACTTTTCAAGGGAGAAACTTTATTGACACTATTCTTGCGATGTTCCTTGTCGTAGGAAGCGATGGCCTTGTTAAGCTATGGACCATCAAAACAAATGAATGCATTGCTACTTTCGATAAGCATGATGGGAAGGTATGATAGTCTCATCTGCTCTGTTTTTCATTGAAAACCCTAGCAGTATATCAACCTATTATTATCACAATTCCAGTATGTCAATAGTGCAATCTCTTCATTGAGTTGAGAATTATAACACTATCTATTGTAGTTTTTACCAATATTTATAGAATTAGGAACGAACCTATTTGTGCTCAGTCAAGCAGAAAACTGTTGCCATTGTTGTTCATGGCTTATGGCTTTCTGACAATCTAACATTCACTTTGGCTATGCCATGAACTTGCCTTTTCTGATAAATTGGGACCTCTTTTGCTCTAAAATTCCTCTTTGGGAAGAACGTGTAGTTTATGAAATTATTCAGTATGTATTTCAGTACCTGACAAAAACTTTGCAATATCGAGATCATTAATATTTAATAGGCAATGTGGAAGAGATCTTTTCTGGTACATGTTTAAGATGGACTTGGCAATTGATTCAGTCATTCAACAGGTTTGGGCACTGGCTGTTGGCAAGAAAACTGAAATGCTTGCTACTGGCGGAACTGATGCTGTTCTTAACCTTTGGCATGACTGTACCATGGAAGATAAACAGGAAGATTTTCGTAAAAAGGTAAGTGATGTGTTCTATTATACTTTCAGTGCAGTGCTTCTTGAGTTCTTGTAAAGACATAAGAGATGTACTTGTGTCTGTTACTGTGTTGAACACATGGTCTGATGACTGATGTCAATCTAGTAATTAATATCTTTTTTTTTTCTGCCCACCAATCTTTGTGGGTTTAGACTTTTCCCTTGTATTTCCAGATCAGCTACACTTGTTTCTTTTACAAAGGTGGCTCTTGGAATCTATATAGAAATATTTTTATTTAATTTCCACACTTGCAATACTCATTACATTCACCATTGTTGCAGGAGGAGGAACTGTTGAGAGGTCAGGAATTAGAAAATGCAGTATCAGATTATGACTATGCAAAAGCAATACAACTTGCATTTGAGCTTAGAAGACCCCACAGGCTTCTTGAGTTATTCACACAGCTTTGCAGGTACTCATAATCCTTTATTGAAGCTCACTAGTTTTTCTTTGATAACAAATTGATATATCACATGAGTGTGCAGGGAGTCTGATCTGGAGGACCCAATAGAAAAAGCCCTTATTGGTCTTCCAAAGGAAGGGCTTCGCGTACTTCTTGAGTATATCCGGGAATGGAACACAAAACCTAAGCTTTGTCATGTTGCACAGTTTGTGCTTTTTCGGGTATTGAGGAGCTTGCCTCCCACTGATATCCTGGAGGTACTTCCTTTCCCCCTTTCTGAGTTATGTCCAAGAGCCTCATATAACAAACTTTTACTCTTTTTATGACACCATTTGTTTCTGCAGATAAAGGGCATCAGTGAGCTCCTTGAGGGACTTATTCCATATTCACAGAGGCATTTCAGCAGAGTTGATAGACTAGTACGAAGCACATTTTTATTGGACTACACCTTGACCCGGATGTCTGTTGTAGATCCGGACATAGATGAGGGCACAACCAGAGATGACGCAAATGGCTCATCAGTAGAGAATTGTGAAATTGCACAGGCGAAGCCTGATGCATTGGTAGCAGAAGAGAACTTGCAAAAGTCGGTAAAGAAAAGAAAATCAAGCAAATCAAGCAAAAAAGGCGGTAAGAAGGTGAAGATTGCGTCCACGGGGGGCAGTAAGGATGTTCCTATTGAGGCTTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA014445