BGIOSGA014447

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Revision as of 03:58, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA014447| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA014447, complete gene.| tag = OSJNBA0...")
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Gene Name

BGIOSGA014447

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA014447, complete gene.

LocusTag

OSJNBA0009P12.18

Ensembl Transcript ID

BGIOSGA014447-TA

Ensembl Protein ID

BGIOSGA014447-PA

Length

2937

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:28827235..28830171

Sequence Coding Region

28830100..28830171,28829665..28829713,28829237..28829356,28829057..28829151,28828674..28828879
,28828393..28828581,28828111..28828314,28827706..28827859,28827568..28827631
,28827404..28827478,28827235..28827314

Genome Context

<gbrowseImage1> name=IndicaChromosome04:28827235..28830171 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:28827235..28830171 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCTGGGCCCTCTCCGCCGCGCCGCCGTGGCCGCGGGCGCGGCGTCCGCGTCGGCGGCGAGCCTCCGGCAGTTCCAGTGCGCTTACCATCGAAGCAATGAGAGATTACTGCCCTGTCGAGACCAAGAAGTTTCATATGGTCTTAATTGGGCTATTGCTGGAAGAGGTGTTGTTGTAAAAGATAAGGTCTTCTATAACCTGGAGAAATCGGAACTTCAGAAAGGTGGTGCTGCTTACACAGAGTGCCTGTCTGGCATTCCACTTCATGTTAGAGGAAATGTCATTAGCGGGATTCCTGATGTTTCAAGAGCTCAATTCGCAAAGCTTCTTAAACTGGTGACCTTTCATCTTTCATCTATCTCAAGTCTGTATGTCCAAGACGGTGCTGTTGGTTCCTCTGTGGAGTGTGATGCAAAGGTCCGTGTTATTAGCGATAACCCCTCTGCTGTTCTGTTGCTCTACAATATCCTTTGGAAAACACCAGATCGTTCTATTTCCCATGACACATGCCCATTGACTATATATGTTGCCAGCTCGATAAGTGCTAATGTCAGGAATTCTCTTGGTTCTGGATCACAATACGCCAATGGATTTGCAGCAGCAGACATAGAACGCTCGTCACTTATCCTATGTGGTAAAGCATTTGCTGATTCCGCTATGCTCAAAGGTGCTCTTAGTGCTTTGACTGCCCCTGTATTATCAGCAAGGGGAGGGCTACCATTTCCTGGGTGGCTCCTGTCTTTTGGTGGTTCTGCTGTATTGTTGTTTGCTCCAGTGGATGTCATAAAATCCTTAAAACTTCAGGACGTTCTCGTGTCCACTGACAGTGGTGTAGTTGTCTCCCCTAAAGGATCTAATGTGCTATTCGCCACAAAGGCTAGGGAACCAAATTTGTTTACCAGACCAACTCAAGTTATTATTGTATCATCGGATAGTACTGATGCCCTACCAGCATTATCAAAGCTTTCTCCAGGCCAGGCTGCTTACCATTTCTTAGCAGGATATTGTGATGGTAAATTTATCCCAGCTTACAGCAAGGACCCCTCCCCTCTTGACCCCATTGCCCTAGCAAATTCCTTATTTTCTCATCTGAAAGAAGATAATACACCTACTTATCTGATAAATGCCAAGAGCTCTGGAAAGTACATAGATGGCAAGGAGTTCGTGAGGCTAATAGAGGTGTTATTATCGAACAATCTGCCAGACCGCAAATCTGAAGATATTAGAGTGGGGGAATTGAAGGGAAAGTACAAGAGCTTTTTATCCAGCAAATTCGGCAAATATTTACCTAAGGAGTTCTCTTTCTGA</cdnaseq>

Protein Sequence

<aaseq>MLGPLRRAAVAAGAASASAASLRQFQCAYHRSNERLLPCRDQEVSYGLNWAIAGRGVVVKDKVFYNLEKSELQKGGAAYTECLSGIPLHVRGNVISGIPDVSRAQFAKLLKLVTFHLSSISSLYVQDGAVGSSVECDAKVRVISDNPSAVLLLYNILWKTPDRSISHDTCPLTIYVASSISANVRNSLGSGSQYANGFAAADIERSSLILCGKAFADSAMLKGALSALTAPVLSARGGLPFPGWLLSFGGSAVLLFAPVDVIKSLKLQDVLVSTDSGVVVSPKGSNVLFATKAREPNLFTRPTQVIIVSSDSTDALPALSKLSPGQAAYHFLAGYCDGKFIPAYSKDPSPLDPIALANSLFSHLKEDNTPTYLINAKSSGKYIDGKEFVRLIEVLLSNNLPDRKSEDIRVGELKGKYKSFLSSKFGKYLPKEFSF</aaseq>

Gene Sequence

<dnaseqindica>1..72#459..507#816..935#1021..1115#1293..1498#1591..1779#1858..2061#2313..2466#2541..2604#2694..2768#2858..2937#ATGCTGGGCCCTCTCCGCCGCGCCGCCGTGGCCGCGGGCGCGGCGTCCGCGTCGGCGGCGAGCCTCCGGCAGGTGAGGGTTAGCTTCCGTACTACTCCGCCGGCGTGTGCGTTTTACGAATCCCGCGGTTTATTCGGCGAGGGTTTCGGAGTGCCTCGATTCTGAACCGAGAGTTGGAGAAGGAGCTCTAGTTCGATAGCTGATTTGGAGGAGTTGGCTTCGTGGTTTATGCTCGTGCGATGCGTCGTTGGGTGATCGAAGGGCTGGTTGAATGTGTCGATTTCTGTTGAATTTGGTGGGATTCGCCCGGAGAGAATTTTGATGGGATTCTGTGCGAGACGCAAGGTTTTTTAGTTCTGTGATGCGAAAATATTGCGATTGTTCAATAGCTCTGATTTTGAAATGCTAGTGTATATTGGGGAGTCTGACGGTAAATTTTGGCTTCTGAAATGGTGCAGTTCCAGTGCGCTTACCATCGAAGCAATGAGAGATTACTGCCCTGTCGAGGTAAGCGTGGCCATACCATACACTTTTCATCCTATATATGCTTGTAAACTCTGATTTTTTATTTTTTACACAAAACACAATGTTCTACTGTGCAAGATCACATGATGACTTTTTTAGATGGTGGATAGAATCTGGCCTCTATATCCACAAGGGGATATACACAGCCAATTACATGATGACCTGACGACTTGATTACATTGTTTGGTGTTTCGTCTACCAAGTTAGATGTTCGGTTCATTCAAATTGCACCAGTCAATACAAACAAAATATTTGAACTACTTTAATGTACTATTTGTTGCACAGAGAAGACCAAGAAGTTTCATATGGTCTTAATTGGGCTATTGCTGGAAGAGGTGTTGTTGTAAAAGATAAGGTCTTCTATAACCTGGAGAAATCGGAACTTCAGAAAGGTGGTGCTGCTTACACAGGTATGTGAGTATATGTATTATGCGTACATACAATTGATATGATTGATGCTAATGTAGAACTTGTTACCTTCTTCTGGGCATGGAGAGTGCCTGTCTGGCATTCCACTTCATGTTAGAGGAAATGTCATTAGCGGGATTCCTGATGTTTCAAGAGCTCAATTCGCAAAGCTTCTTAAACTGGTACATTTGTATTTTTTATTCAATTATTCATGCGATGTTATCTCAGAATTGTAAATTGATCTGGATTAGTTTGCCACCTATTGCAAACAGTATTTAAGGTTCCTCTTATCAGTTGAGCTACAGTGCCTCAATTTAGCTGGCCTCCTTATGTTTTGATGGGCTGTTATCTTTCTATAGGTGACCTTTCATCTTTCATCTATCTCAAGTCTGTATGTCCAAGACGGTGCTGTTGGTTCCTCTGTGGAGTGTGATGCAAAGGTCCGTGTTATTAGCGATAACCCCTCTGCTGTTCTGTTGCTCTACAATATCCTTTGGAAAACACCAGATCGTTCTATTTCCCATGACACATGCCCATTGACTATATATGTTGCCAGCTCGATAAGGTAATCTTTTCTTTGCATCAGCAAAAGCCACCACACCTTTAGCTGATGATAGCGCCAAAAACTAATATTTCTTGATGCATGTTTTTGGACAGTGCTAATGTCAGGAATTCTCTTGGTTCTGGATCACAATACGCCAATGGATTTGCAGCAGCAGACATAGAACGCTCGTCACTTATCCTATGTGGTAAAGCATTTGCTGATTCCGCTATGCTCAAAGGTGCTCTTAGTGCTTTGACTGCCCCTGTATTATCAGCAAGGGGAGGGCTACCATTTCCTGGGTGGTAGGATGTGCTCTTTTCTATCTCTCTCCATAAGTATATTTTTCCCTCTTTCATAATTATCATATTTGTCTTCCATAGGCTCCTGTCTTTTGGTGGTTCTGCTGTATTGTTGTTTGCTCCAGTGGATGTCATAAAATCCTTAAAACTTCAGGACGTTCTCGTGTCCACTGACAGTGGTGTAGTTGTCTCCCCTAAAGGATCTAATGTGCTATTCGCCACAAAGGCTAGGGAACCAAATTTGTTTACCAGACCAACTCAAGTTATTATTGTATCATCGGATAGGTAATGAAGAACCTGTGCTTCAAAGGGTGCACAACATCATTTGCTGTTTTGCCTCTCATTTACAGAATATTGTGACAAGATAGTTTGCAAAAGTAACAAGAAGTGCTTCATTTTTCTGCATGTTTAAGATCCACATAAATTGTAGCTAGAAGGAATGGGACAACATATATGTACTGCTGTTTGTTGCGTTATCTACAGTTTTTCTAAAACTGAGTTTGCTAACAATGTGTTTGGTTTCCTTTTACGTTCAGTACTGATGCCCTACCAGCATTATCAAAGCTTTCTCCAGGCCAGGCTGCTTACCATTTCTTAGCAGGATATTGTGATGGTAAATTTATCCCAGCTTACAGCAAGGACCCCTCCCCTCTTGACCCCATTGCCCTAGCAAATTCCTTATTTTCTCATGTAAGTTCCCTTCATGATTACCACTCTTAGCATTCTGGTATATATGCCAAAAGACCAATGTTCTACCTTTCCAGCTGAAAGAAGATAATACACCTACTTATCTGATAAATGCCAAGAGCTCTGGAAAGTACATAGATGGTAATAAAATTTCTGGCTTTTCATGTATATAATTCTGTTTGCTTTACTTTAGTGAAGGGCTTTTAGCTTTCAAACATTGTCAAATACAGGCAAGGAGTTCGTGAGGCTAATAGAGGTGTTATTATCGAACAATCTGCCAGACCGCAAATCTGAAGATATTAGAGGTAAATAATTCATGAAACTAGAATGCAGTTAACATCAACCATATAGTGTGACCCTTTTTTGATGGAAGAATGCATGGCTTTTACTGCAGTGGGGGAATTGAAGGGAAAGTACAAGAGCTTTTTATCCAGCAAATTCGGCAAATATTTACCTAAGGAGTTCTCTTTCTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA014447