BGIOSGA014527

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Revision as of 03:59, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA014527| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA014527, complete gene.| tag = OsI_170...")
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Gene Name

BGIOSGA014527

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA014527, complete gene.

LocusTag

OsI_17027

Ensembl Transcript ID

BGIOSGA014527-TA

Ensembl Protein ID

BGIOSGA014527-PA

Length

5716

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:27447131..27452846

Sequence Coding Region

27452727..27452846,27452316..27452605,27452101..27452218,27451278..27451985,27451092..27451193
,27450766..27450993,27449451..27449531,27448896..27449073,27448449..27448822
,27447131..27447481

Genome Context

<gbrowseImage1> name=IndicaChromosome04:27447131..27452846 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:27447131..27452846 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGAGCTTTGGAGTTGGAGATCACTTCGACGACGGCGTGGTCCCCGCCGGCATGCAGTTCCCGTTCTCCGGCGCTGGCCCGGGCGTCTTCACGTCATCGCCGGCGCTCTCCCTCGCGCTGGCGGACGCGGTGGCAGGCCGGAATAGCGGCGGCGGTGGGAAGATGGTTACCGCGGCCCATGGCGGCGTCGGCGGAGGAGGAGGAGGACGCGCGAAGGCGAGGGACGCGTTGGAGGTGGAGAACGAGATGAGCCGGTCCGGGAGCGACCACCTCGACGTCGTCTCTTGCGGCGACGCGGGCGGCGGCGGCGGCGACGACGACGATGACGAGGACGCCGAGCACGGCAACCCGCCCAAGCGCAAGAAGCGGTACCACCGCCACACGCCGCAGCAGATCCAAGAGCTGGAAGCGATGTTCAAGGAATGCCCCCACCCAGACGAGAAGCAGCGCGCCGAGCTGAGCAAGCGGCTCGGCCTCGAACCCCGGCAGGTCAAGTTCTGGTTCCAGAATCGGCGAACGCAGATGAAGATGCAACTGGAGCGACACGAGAACTCGCTGCTGAAGCAGGAGAACGATAAGCTGCGGTCCGAGAACCTGTCAATCCGGGAGGCCACGAGCAACGCGGTGTGCGTTGGCTGCGGCGGCCCGGCGATGCTCGGGGAGGTGTCCCTGGAGGAGCACCACCTTCGCGTCGAGAACGCGAGGCTCAAGGACGAGCTCAGCCGAGTGTGCGCGCTGGCCGCCAAGTTCCTTGGCAAGTCCATCTCTGTCATGGCGCCACCGCAGATGCATCAGCCTCATCCTGTGCCAGGCTCGTCGCTGGAGCTTGCGGTTGGGGGTATCGGTTCGATGCCATCAGCCACGATGCCCATCTCGACGATCACTGATTTTGCTGGCGCCATGTCCAGTTCAATGGGCACGGTGATCACGCCCATGAAGTCTGAGGCTGAACCATCGGCAATGGCTGGCATTGACAAGTCCTTGTTCTTGGAGCTAGCAATGAGTGCAATGGATGAGCTAGTCAAGATGGCTCAGATGGGGGATCCGCTATGGATTCCAGGTGCCTCCGTACCTTCCTCGCCGGCAAAGGAGAGTCTAAACTTCGAGGAGTACCTAAACACCTTCCCACCTTGCATCGGGGTGAAGCCTGAAGGGTATGTATCAGAGGCATCTAGAGAATCTGGCATTGTCATCATTGACGATGGCGCCGCGCTTGTGGAGACCCTCATGGATGAGCGACGGTGGTCCGATATGTTCTCATGCATGATTGCCAAGGCATCAACCACTGAGGAGATTTCTACTGGTGTTGCTGGGAGTAGAAATGGTGCATTGCTTCTTATGCAGGCAGAGCTACAGGTGCTTTCTCCTCTTGTGCCTATTAGAGAGGTGAAGTTTCTCAGGTTCTCCAAACAGCTGGCTGATGGTGTATGGGCTGTAGTGGACGTTTCGGCTGATGAATTGATGAGGGATCAGGGCATTACTTCTGCATCCTCGACTGCAAACATGAACTGCCGAAGGCTGCCTTCTGGTTGTGTGCTGCAGGACACTCCAAATGGATTTGTTAAGTATTTAGTTCAAATATCAGTATTTTCTGAAGTCTATAATCTCTCTATTGATCAGTTTCTGGATCTGCCTCCTGCTTTCATGGTCACATGGGTTGAACATACAGAATATGATGAGGCATCTGTGCACCCGCTCTACCGGCCTCTTCTCCGGTCTGGTCTTGCCCTTGGTGCAGGGCGATGGATCGCGACATTACAACGGCAGTGCGAATGCTTGGCCCTTCTCATGTCTTCTATTGCATTGCCAGAGAACGACTCATCAGCTATCCATCCTGAAGGTAAACGGAGCATGTTGAAGTTGGCAAGGAGGATGACGGACAACTTCTGTGCAGGGGTGAGCACATCATCTACCCGTGAATGGAGCAAACTGGTTGGATTGACAGGCAACATTGGGGAGGATGTGCATGTAATGGCGCGGAAGAGTGTGGATGAACCTGGAACGCCGCCAGGTGTGGTGCTTAGTGCTGCTACATCTGTGTGGATGCCTGTGATGCCTGAACGGCTCTTCAACTTCTTGCACAACAAGGGGCTGCGTGCTGAATGGGATATCCTCAGCAATGGTGGCCCTATGCAGGAGGTGACAAGCATTGCCAAGGGGCAACAGAATGGCAATACCGTATGTCTACTGAAGGCTAGTCCCACCAAAGACAAGCAGAACAGCATGCTGATCCTACAGGAGACGTGTGCAGACGCATCCGGTTCAATGGTTGTGTATGCTCCTGTAGACATCCCAGCAATGCACCTTGTCATGAGTGGTGGGGATTCGTCATGCGTCGCCCTTCTTCCATCAGGTTTTGCCATCCTGCCTGCTGGGCCTAGCATCGGCGCAGATCACAAGATGGGCGGTTCATTGCTCACCGTTGCATTCCAGATACTTGCCAACAGCCAGCCCAGTGCTAAGCTCACGGTGGAGTCAGTCGAGACCGTGAGCAACCTTATCTCCTGCACCATCAAGAAGATCAAGACGGCGCTGCATTGCGACGTGTGA</cdnaseq>

Protein Sequence

<aaseq>MSFGVGDHFDDGVVPAGMQFPFSGAGPGVFTSSPALSLALADAVAGRNSGGGGKMVTAAHGGVGGGGGGRAKARDALEVENEMSRSGSDHLDVVSCGDAGGGGGDDDDDEDAEHGNPPKRKKRYHRHTPQQIQELEAMFKECPHPDEKQRAELSKRLGLEPRQVKFWFQNRRTQMKMQLERHENSLLKQENDKLRSENLSIREATSNAVCVGCGGPAMLGEVSLEEHHLRVENARLKDELSRVCALAAKFLGKSISVMAPPQMHQPHPVPGSSLELAVGGIGSMPSATMPISTITDFAGAMSSSMGTVITPMKSEAEPSAMAGIDKSLFLELAMSAMDELVKMAQMGDPLWIPGASVPSSPAKESLNFEEYLNTFPPCIGVKPEGYVSEASRESGIVIIDDGAALVETLMDERRWSDMFSCMIAKASTTEEISTGVAGSRNGALLLMQAELQVLSPLVPIREVKFLRFSKQLADGVWAVVDVSADELMRDQGITSASSTANMNCRRLPSGCVLQDTPNGFVKYLVQISVFSEVYNLSIDQFLDLPPAFMVTWVEHTEYDEASVHPLYRPLLRSGLALGAGRWIATLQRQCECLALLMSSIALPENDSSAIHPEGKRSMLKLARRMTDNFCAGVSTSSTREWSKLVGLTGNIGEDVHVMARKSVDEPGTPPGVVLSAATSVWMPVMPERLFNFLHNKGLRAEWDILSNGGPMQEVTSIAKGQQNGNTVCLLKASPTKDKQNSMLILQETCADASGSMVVYAPVDIPAMHLVMSGGDSSCVALLPSGFAILPAGPSIGADHKMGGSLLTVAFQILANSQPSAKLTVESVETVSNLISCTIKKIKTALHCDV</aaseq>

Gene Sequence

<dnaseqindica>1..120#242..531#629..746#862..1569#1654..1755#1854..2081#3316..3396#3774..3951#4025..4398#5366..5716#ATGAGCTTTGGAGTTGGAGATCACTTCGACGACGGCGTGGTCCCCGCCGGCATGCAGTTCCCGTTCTCCGGCGCTGGCCCGGGCGTCTTCACGTCATCGCCGGCGCTCTCCCTCGCGCTGGTACGCGCGCCTTCTTCGCTGACGTGTTGGGGGGTTTTTGTTTCTTTTTTTTTTTGGTGGTGATACGGTCGAGTGATTCGGAAAGGCGCGTCTTTTCTTTGGTTGGTTCGGTTTGTCGCAGGCGGACGCGGTGGCAGGCCGGAATAGCGGCGGCGGTGGGAAGATGGTTACCGCGGCCCATGGCGGCGTCGGCGGAGGAGGAGGAGGACGCGCGAAGGCGAGGGACGCGTTGGAGGTGGAGAACGAGATGAGCCGGTCCGGGAGCGACCACCTCGACGTCGTCTCTTGCGGCGACGCGGGCGGCGGCGGCGGCGACGACGACGATGACGAGGACGCCGAGCACGGCAACCCGCCCAAGCGCAAGAAGCGGTACCACCGCCACACGCCGCAGCAGATCCAAGAGCTGGAAGCGTAAGCGCGCCCCCACCCACGAACAACGATTCGTTGCATTCTCCTGTGCTTGGCTGCTTGCTTTGGCTCATGCATGGATACTGGCTCATCGGTGCAGGATGTTCAAGGAATGCCCCCACCCAGACGAGAAGCAGCGCGCCGAGCTGAGCAAGCGGCTCGGCCTCGAACCCCGGCAGGTCAAGTTCTGGTTCCAGAATCGGCGAACGCAGATGAAGGTAAGCGATCGAAACGAACAGCAAACCATCTTTGCACTCCGATCGATGGTGCAGTGCAGTTCTTGACACTGTGTGTGTGTCTCTCTCTCTCCCTGTGGTGATTGAATTGGCAAAGATGCAACTGGAGCGACACGAGAACTCGCTGCTGAAGCAGGAGAACGATAAGCTGCGGTCCGAGAACCTGTCAATCCGGGAGGCCACGAGCAACGCGGTGTGCGTTGGCTGCGGCGGCCCGGCGATGCTCGGGGAGGTGTCCCTGGAGGAGCACCACCTTCGCGTCGAGAACGCGAGGCTCAAGGACGAGCTCAGCCGAGTGTGCGCGCTGGCCGCCAAGTTCCTTGGCAAGTCCATCTCTGTCATGGCGCCACCGCAGATGCATCAGCCTCATCCTGTGCCAGGCTCGTCGCTGGAGCTTGCGGTTGGGGGTATCGGTTCGATGCCATCAGCCACGATGCCCATCTCGACGATCACTGATTTTGCTGGCGCCATGTCCAGTTCAATGGGCACGGTGATCACGCCCATGAAGTCTGAGGCTGAACCATCGGCAATGGCTGGCATTGACAAGTCCTTGTTCTTGGAGCTAGCAATGAGTGCAATGGATGAGCTAGTCAAGATGGCTCAGATGGGGGATCCGCTATGGATTCCAGGTGCCTCCGTACCTTCCTCGCCGGCAAAGGAGAGTCTAAACTTCGAGGAGTACCTAAACACCTTCCCACCTTGCATCGGGGTGAAGCCTGAAGGGTATGTATCAGAGGCATCTAGAGAATCTGGCATTGTCATCATTGACGATGGCGCCGCGCTTGTGGAGACCCTCATGGATGAGGTTGTGCTTGTGCCACCTTACCCCCTTTCATGTTTCTGTTGCTTGTTTGTTTGGACTCACCTGTAGTTTGAATTCTTGCGACAGCGACGGTGGTCCGATATGTTCTCATGCATGATTGCCAAGGCATCAACCACTGAGGAGATTTCTACTGGTGTTGCTGGGAGTAGAAATGGTGCATTGCTTCTTGTGAGTGATGAACATTCTGTTGTGGCCATCCCATGAGTTTCATGTGGTTAATCATACTAGCATAACCCCTGAATGGTAAATTTCGATCATTGCAACAGATGCAGGCAGAGCTACAGGTGCTTTCTCCTCTTGTGCCTATTAGAGAGGTGAAGTTTCTCAGGTTCTCCAAACAGCTGGCTGATGGTGTATGGGCTGTAGTGGACGTTTCGGCTGATGAATTGATGAGGGATCAGGGCATTACTTCTGCATCCTCGACTGCAAACATGAACTGCCGAAGGCTGCCTTCTGGTTGTGTGCTGCAGGACACTCCAAATGGATTTGTTAAGGTACTGAGACTGATTATCTTTGTTAGCTCCTGCTCCTTAGATATTCTTAGGTAAATGTCTTAAACCGTGATATCCTTGACTAGTTCACTTCAGGGTAGTATGTGGTTTTACATCTATTAATTCACACTAGTCAGCATGCTATCGGTTGACGTGAAACTCATCTACCTTGCAAAGTCGCAGCTCGGTAGTACCCACGACGCTGCCACTAGAAGTCTGTCAAAACCAGCCATATTAGTTGCAAAGCTTGTTAGCTCTACTCATATGATAATCATACATATGGAGAGTGCTTTATTAGTTCAGGCTCTCTGCAACTAACATGACACTCATGGAAAAGAGTATTCGTGTATTCTTTCGTAATGTTTCAAATAATGTATGTTAGTTTAATGTGTCATCTGGTGATCACCATGCAATATTTTGTTCGTATTCACAAGTCATGGCGTAGGCTCATGTCTCCTATAGATATGTTGTGGTTATGAGTCCATAATCCGAAGTTAAGTATTGTATTGGTCAGCGGGGAGGGGAGTAAATAAATGATTTAGGAATACTTAAGTGGTTCTGAGATCCAACACTTTTCCCCAAGTACGCTCCCTTGCTTTTGTTTAGTCCTGAGTTCAGTTCTCCTAGGGGATTAGATACTTCTTCTACTCCTGGGATGGTGCCCCTTGGGTAACTTCTTGTCCGCAGTTTAATCGATGCGTCTCGTTGAAATCTTGACTGCTTCCTCTATTGTTTTGTCTCAATGTAAAAGTCCTCTTCACCTTGGGTTTTGTACCAGAGTTTTATATAGCCTTGATCCAAATTGCTCTGGGGCGCACACATGCACGAACGATTCTATTCAAAATTCTAAATTGGACATCTGAATGGGACAAATATATCTAGTCTACAATGGTAGAAACATGATTCGATGAGTTATAACGTCTCATTACTATAGATTACACTGTATAAGTTAATCTGATGTAAACCCACAGGTTGAAAGCAGGAAGTGGTTCTTTATTTTAAGGGTTCAGGAACACAATATTTTGGAACACTAGTGGTGTGCCATTCTTGGGGCATACCATAAGTCAAAATAATTAACGATGAAGATACTGTGATCAGAACCATGCTTTATAAAATGTAAACAAAGTCAATCTCAGACAGATCAGCTAATCCTAGATCAAACTAGAGATACTGTCGTCTCTCAAGATTTCTACTTTTCTTCTGTAATTTCATTTATGTGCTTTTGGTGCTTTTACAGTATTTAGTTCAAATATCAGTATTTTCTGAAGTCTATAATCTCTCTATTGATCAGTTTCTGGATCTGCCTCCTGCTTTCATGGTACTTCTATGGTTTATTCTATGCAAAACAGAATAGACAAATGTGTTACTATTATCCATTAGTCCTATGGCCTATGGTTCTCTTACAAAGTACTAGTTACAATGCTGGGGCCCCACTATGGGCTAATATTTCGAGGTAGCCTCTATTTTAAAACATTATGTTGATGTCCTTTTTATGTTCCATTGATTGGGCAAAAAGAAATTAAAAAAAAAACTTAGATGGAAAAATAATATTAATTGTACCATTCAGCTTGTGTAGTAGTTGCGTACTCCAGGAAAACTGCACCTCAGGCCTCTTTTGGTGTATTACCTCTCAAGACATTTGCATTTTGTGCGTGCATTTAAGTCCTAACAGCAGATCTTGAATGTACGCTGTAGGTCACATGGGTTGAACATACAGAATATGATGAGGCATCTGTGCACCCGCTCTACCGGCCTCTTCTCCGGTCTGGTCTTGCCCTTGGTGCAGGGCGATGGATCGCGACATTACAACGGCAGTGCGAATGCTTGGCCCTTCTCATGTCTTCTATTGCATTGCCAGAGAACGACTCATCAGGTAAAGAAATTCAATACTACTGCTAACTTTCAATTGGATCCACCCTTCTAATAAAGTGCTACATTTGCAACAGCTATCCATCCTGAAGGTAAACGGAGCATGTTGAAGTTGGCAAGGAGGATGACGGACAACTTCTGTGCAGGGGTGAGCACATCATCTACCCGTGAATGGAGCAAACTGGTTGGATTGACAGGCAACATTGGGGAGGATGTGCATGTAATGGCGCGGAAGAGTGTGGATGAACCTGGAACGCCGCCAGGTGTGGTGCTTAGTGCTGCTACATCTGTGTGGATGCCTGTGATGCCTGAACGGCTCTTCAACTTCTTGCACAACAAGGGGCTGCGTGCTGAATGGGATATCCTCAGCAATGGTGGCCCTATGCAGGAGGTGACAAGCATTGCCAAGGGGCAACAGAATGGCAATACCGTATGTCTACTGAAGGCTAGTGTGAGTATTAGCTAACAGTCTGCCACAGTTCTGTTCATAGCTTGCTACTTACTAAACAGCATCATTAACTGACTTGTGGGGGAGACTGCCATTTCAAAATTGTTGCAAACCTAAACACAACATTTTAGAATTTGTTGGGGGCACCACATCACTAAACACTCTAAACAATCACATGCTTGTCTGAAACCAGTTTAATGTGAAATAATTTAGAATTTGTGAAAAGAGTACCCTTGCTTGGCCATCTTAGGTATTTTATATTGCTAAAAGAAAGGAAATGAAGCCAAGGAAGTACTGCATTAGCTGGTGGGGAAAGCATAAGAACTATGTCTATTCACAACTGGAATTTTGTGAGTCTTAATTCTGTAACGGTTGTACCAGTGATGATATAGTTGTACAAATACAAAACTATATGTTTAGTCACACATTTGGCAATTGCCTAACAAATACAACTCTACTATAATATATAAGCATGTATAGAAATTCCGCTAGGTCGATAGAGATTAATGGAGGTTAGAAAGATGCTACACATTTCCAATCCTGCAATCTAAATGATGACATCAATGTAAGTGCCCAGATATTCCATTAAGAAAAAGAGAAGAGTATAAGGCGGAAAAACTAGTTTTTGACTTATCAAATATTGTTGGGAGTCAATAATCTGCAGAACCTAACTTTACACAGTATCTGAGGAAGGGTTGCTGGTAGGGCCAAAACAGAGGAACAAATATCTACTACTAGAAAAGGTATTGTGCCTGACCTATTCACAGCCCAAATTTTGCAGTCAAACTAACTTCATACATAACAAAGGTCTAAAATCTTTAACGGCTTCAGTGTAATCTCGGTCAGTCAACTGTGCCTGTGTAGGTCACTCTGGATCATGAAAAGCATCATTGACAGAAATTATCAAATCATTTTCTGTTTTGATCTCTAGTAGTCTTCTGTTCCCCTTACCAAAAATTTCACTGTGCAGCCCACCAAAGACAAGCAGAACAGCATGCTGATCCTACAGGAGACGTGTGCAGACGCATCCGGTTCAATGGTTGTGTATGCTCCTGTAGACATCCCAGCAATGCACCTTGTCATGAGTGGTGGGGATTCGTCATGCGTCGCCCTTCTTCCATCAGGTTTTGCCATCCTGCCTGCTGGGCCTAGCATCGGCGCAGATCACAAGATGGGCGGTTCATTGCTCACCGTTGCATTCCAGATACTTGCCAACAGCCAGCCCAGTGCTAAGCTCACGGTGGAGTCAGTCGAGACCGTGAGCAACCTTATCTCCTGCACCATCAAGAAGATCAAGACGGCGCTGCATTGCGACGTGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA014527