BGIOSGA014554

From RiceWiki
Revision as of 04:00, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA014554| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA014554, complete gene.| tag = OSJNBA0...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA014554

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA014554, complete gene.

LocusTag

OSJNBA0084K11.9

Ensembl Transcript ID

BGIOSGA014554-TA

Ensembl Protein ID

BGIOSGA014554-PA

Length

2549

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:26878309..26880857

Sequence Coding Region

26880122..26880857,26879713..26879856,26879463..26879615,26879229..26879341,26878982..26879149
,26878775..26878902,26878451..26878550,26878309..26878368

Genome Context

<gbrowseImage1> name=IndicaChromosome04:26878309..26880857 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:26878309..26880857 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGGCAACTGCTTCACCAAGACGTACGAGATACCCATCACGTCGGGCACGATGCGGCGGCCGGCGTCGACCGCGGAGCGCAGCAAGGCGCGTGGCGGCGATGAGCCGGGGACGTGGCGGCGGCCGAGCTTCCCGAGGCACGGGGCCCCGCCGCACCGGCCGCCGACGGGCTCGTCTTCGGCGGCGGGGGCGCTGTCCCGGAGGGCGTCCGGCGGCGGCGGGGAGATGGGCCCCGTGCTGCAGAGGGCGATGGTGAGCGTGCGGTCGCTGTACCAGCTGGACCGGAAGCTGGGGAGCGGGCAGTTCGGGACGACGTACCTGTGCACGGAGCGCGCGACGGGGAACCGGTACGCGTGCAAGTCGGTGTCGAAGCGGAAGCTGGTGCGGCGCACCGACGTGGACGACGTGCGCCGGGAGATCACCATCCTGCAGCACCTCAGCGGGCAGCCCAACATCGCGGAGTTCAGGGGCGCGTACGAGGACAACGACCACGTGCACCTCGTCATGGAGTTCTGCTCCGGCGGCGAGCTGTTCGACCGCATCACGGCCAAGGGGAGCTACTCCGAGCGGCAGGCCGCTGCCGTGTGCCGGGACATCCTCACCGTCGTTCACGTCTGCCACTTCATGGGGGTCATACACCGCGACCTCAAGCCGGAGAACTTCCTGCTCGCCAGCGCCGACGACGACGCGCCGCTCAAGGCCATCGACTTCGGACTCTCCGTCTTCATCGAAGAAGGTAAAGTGTACAAGGACATTGTCGGAAGTGCTTATTATGTGGCGCCAGAAGTGTTACAACGAAATTATGGGAAAGAAGCCGACATCTGGAGCGCTGGGGTGATATTGTATATCCTTCTATGCGGGACGCCCCCATTCTGGGCAGAGACAGAGAAAGGCATATTCGATGCTATACTGGTCAACCAAGTTGATTTCAGTACCAGCCCGTGGCCTTCGATATCTGAAAGTGCAAAGGATCTTATCAGACAAATGTTACATAGAGATCCCCAGAAGAGGATTACTGCATCGCAGGCCTTAGAACATCGATGGCTCAAAGAAGGCGGTGCATCTGACAGACCTATCGATAGCGCAGTCCTATCAAGAATGAAGCAATTCAAGGCAATGAACAAGTTAAAGCAATTAGCTCTTAAGGTAATTGCAGAGAACCTATCACCAGAGGAAATCAAGGGCTTGAAACAGATGTTCAATAACATGGATACAGACAGAAGTGGCACAATCACGGTTGAAGAACTGAAGGTTGGTCTGACAAAGCTAGGATCAAGAATTAGTGAAGCCGAGGTTCAGAAGCTTATGGAAGCAGTTGACGTAGACAAGAGTGGCAGCATTGATTACTCGGAGTTCCTCACAGCTATGATAAATAAGCATAAACTGGAAAAGGAGGAGGATTTACTTCGTGCATTTCAACATTTTGACAAAGATAACAGCGGGTACATAACAAGAGATGAACTGGAACAAGCCATGGCAGAGTACGGAATGGGTGATGAAGCAAACATTAAACAAGTACTGGATGAAGTTGACAAAGACAAGGACGGGAGAATTGACTATGAAGAGTTTGTGGAAATGATGAGGAAAGGAATACAAACCTGA</cdnaseq>

Protein Sequence

<aaseq>MGNCFTKTYEIPITSGTMRRPASTAERSKARGGDEPGTWRRPSFPRHGAPPHRPPTGSSSAAGALSRRASGGGGEMGPVLQRAMVSVRSLYQLDRKLGSGQFGTTYLCTERATGNRYACKSVSKRKLVRRTDVDDVRREITILQHLSGQPNIAEFRGAYEDNDHVHLVMEFCSGGELFDRITAKGSYSERQAAAVCRDILTVVHVCHFMGVIHRDLKPENFLLASADDDAPLKAIDFGLSVFIEEGKVYKDIVGSAYYVAPEVLQRNYGKEADIWSAGVILYILLCGTPPFWAETEKGIFDAILVNQVDFSTSPWPSISESAKDLIRQMLHRDPQKRITASQALEHRWLKEGGASDRPIDSAVLSRMKQFKAMNKLKQLALKVIAENLSPEEIKGLKQMFNNMDTDRSGTITVEELKVGLTKLGSRISEAEVQKLMEAVDVDKSGSIDYSEFLTAMINKHKLEKEEDLLRAFQHFDKDNSGYITRDELEQAMAEYGMGDEANIKQVLDEVDKDKDGRIDYEEFVEMMRKGIQT</aaseq>

Gene Sequence

<dnaseqindica>1..736#1002..1145#1243..1395#1517..1629#1709..1876#1956..2083#2308..2407#2490..2549#ATGGGCAACTGCTTCACCAAGACGTACGAGATACCCATCACGTCGGGCACGATGCGGCGGCCGGCGTCGACCGCGGAGCGCAGCAAGGCGCGTGGCGGCGATGAGCCGGGGACGTGGCGGCGGCCGAGCTTCCCGAGGCACGGGGCCCCGCCGCACCGGCCGCCGACGGGCTCGTCTTCGGCGGCGGGGGCGCTGTCCCGGAGGGCGTCCGGCGGCGGCGGGGAGATGGGCCCCGTGCTGCAGAGGGCGATGGTGAGCGTGCGGTCGCTGTACCAGCTGGACCGGAAGCTGGGGAGCGGGCAGTTCGGGACGACGTACCTGTGCACGGAGCGCGCGACGGGGAACCGGTACGCGTGCAAGTCGGTGTCGAAGCGGAAGCTGGTGCGGCGCACCGACGTGGACGACGTGCGCCGGGAGATCACCATCCTGCAGCACCTCAGCGGGCAGCCCAACATCGCGGAGTTCAGGGGCGCGTACGAGGACAACGACCACGTGCACCTCGTCATGGAGTTCTGCTCCGGCGGCGAGCTGTTCGACCGCATCACGGCCAAGGGGAGCTACTCCGAGCGGCAGGCCGCTGCCGTGTGCCGGGACATCCTCACCGTCGTTCACGTCTGCCACTTCATGGGGGTCATACACCGCGACCTCAAGCCGGAGAACTTCCTGCTCGCCAGCGCCGACGACGACGCGCCGCTCAAGGCCATCGACTTCGGACTCTCCGTCTTCATCGAAGAAGGTCAGGGTCGCGATATCACACATAAGCTACACTACCTCTTTCTTTCTTTCTTTTCCCCCCTTTATCAACACCATGAGTTAATTTGGCTGTTAGAAATGCACGGGTCTAAAGAGTAGAAACGTACAATATCAAAGCAGATGCAGAAATGCATCGATCATGCATGTTGAAAGATCTTGCGAGAGATAATGCACGTACCTTAGCTCGCCATAACAAGATATGTACAAGCTAAGGTAAAATTTCCCCAACAACAAAACAACAAATGCAGGTAAAGTGTACAAGGACATTGTCGGAAGTGCTTATTATGTGGCGCCAGAAGTGTTACAACGAAATTATGGGAAAGAAGCCGACATCTGGAGCGCTGGGGTGATATTGTATATCCTTCTATGCGGGACGCCCCCATTCTGGGCAGGTAAATATCCATAGTACATATTTACTCTTTGGCTAATTTTGCTACATTCTATCAAGTATATCGTGGAGATAATTGTCAAATTTGAATATCTGCGCAGAGACAGAGAAAGGCATATTCGATGCTATACTGGTCAACCAAGTTGATTTCAGTACCAGCCCGTGGCCTTCGATATCTGAAAGTGCAAAGGATCTTATCAGACAAATGTTACATAGAGATCCCCAGAAGAGGATTACTGCATCGCAGGCCTTAGGTAGCACACCTGAATTGTGTTTCGCTATTCTAATCTGCGGTTATGAATGTAAAATTTATCTGCAACTGTATATATACATATAGTGTAGCCAACTCTTTAAATGGATGTCTCCATGCTGCAGAACATCGATGGCTCAAAGAAGGCGGTGCATCTGACAGACCTATCGATAGCGCAGTCCTATCAAGAATGAAGCAATTCAAGGCAATGAACAAGTTAAAGCAATTAGCTCTTAAGGTGAGAATCCTCCTTAACAGGGATAACTACTATGCTTTGGCTAAAATCAAATTGACACGCTGCCTCCTTTCATCTCAAGGTAATTGCAGAGAACCTATCACCAGAGGAAATCAAGGGCTTGAAACAGATGTTCAATAACATGGATACAGACAGAAGTGGCACAATCACGGTTGAAGAACTGAAGGTTGGTCTGACAAAGCTAGGATCAAGAATTAGTGAAGCCGAGGTTCAGAAGCTTATGGAAGCAGTAAGATCATTTGCTTTTGCTAACTCTTCGCTGCAGGTTTAGTTTACAAAAGGATTTTACTAGTGATACTGTGGTACAGGTTGACGTAGACAAGAGTGGCAGCATTGATTACTCGGAGTTCCTCACAGCTATGATAAATAAGCATAAACTGGAAAAGGAGGAGGATTTACTTCGTGCATTTCAACATTTTGACAAAGATAACAGCGGGTAAAATAAATTTTGTTAGCCAATGCACATCCTTTTATCTCGTTCAGCACCATGAATAAAGAGCTCTAAATTGACCAACACTGGAACTTGTTCTGCGCAACAATCATGTTCATTGTATAACGATGTCTAACACATGCTTTCCTTGCATCATATTTTTCTTGCTATAAACTCGTTTGTTAAAAAATCAGTATATATTAACAAGAGACCATGAAAAACAATTCCAGGTACATAACAAGAGATGAACTGGAACAAGCCATGGCAGAGTACGGAATGGGTGATGAAGCAAACATTAAACAAGTACTGGATGAAGTTGACAAAGACAAGGTAAAGCATACCTAAAGTATTTTATTTTCACTAATTAGGGTCATTCCCATGGATTTAATTATTTCCTCCATCGAATTCACAGGACGGGAGAATTGACTATGAAGAGTTTGTGGAAATGATGAGGAAAGGAATACAAACCTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA014554