BGIOSGA014561

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Revision as of 04:00, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA014561| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA014561, complete gene.| tag = B0103C0...")
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Gene Name

BGIOSGA014561

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA014561, complete gene.

LocusTag

B0103C08-B0602B01.7

Ensembl Transcript ID

BGIOSGA014561-TA

Ensembl Protein ID

BGIOSGA014561-PA

Length

3725

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:26822994..26826718

Sequence Coding Region

26826583..26826718,26826430..26826482,26824208..26825678,26824033..26824127,26823697..26823943
,26822994..26823571

Genome Context

<gbrowseImage1> name=IndicaChromosome04:26822994..26826718 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:26822994..26826718 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCAAAGAAGAGTTACAAACAGCGGTGCAAATCTGAGAAGGTCCATATGGGCTGTATGTCGGGCCTCATCCACATGTTTGACTTCCGTCGCAGTCCAAAACTTATTTCAGATGGGACGATTAGGAGGAGTTCAGTCAGAAGTGACCTGAAAGGTTCTGAAGATTTCCATGGAATCATCTTTTCTGATGAGGACAAAGACTATGGGGTTAAAACAATTCATGCCAGCAGGCCAAGTATTAAAGCACTGATGGAAGAAGAGATGGCCAGTGGAACGCAGATCTTGAAGGAAACACAAAGGAACATATTTGGGATACGTTCTGATGATTTGAAGTCTGTGAACCTGCAGGAAGGATCTGATGTTGACCTAGACTTGGCTACAAGTCTCATGGAATTATACAGAAATCATAATGGCAGTCGCGATATTATCACTTCGGAAGTATCAGATCACTCTTCCAGTTTGATTGACAAAGAGCACAATACTGATGCTAGTACTCATCCTAAACAAATCTCCTGTAGTATAGAGAAAGCACTTGAAGCTGTGGCTGAAGCAGTAATAACCCATCAATCTGCAAACGGGAAATACACAAGCAGCAGCTACGAAGCTAGGCCCAATGAATTTCTTGATGCATTACAATTGCTGAGCGCAAACGAAGAGTTCTTTCTGATGCTTCTGAAAGACCCAAGCTCTAGGATGTTGCAATGCCTGCAGAGCCTGTACACGGCACTAGGAAATCCCATGTTAGAACTGGCAGAAGATGACAAACAAACAAAGTCGAAAGTTACCATTAACAGTCTAGAGCAGTCTGAGGTTTCGAAATACAGCGTGCAAAAAAAACATAATTTTTTCTTGAAGGAGGATAAGCTAGTCATGAGGAGACCACCAAAACTGAATGATAGTCCTCGTGGCGTTAGCAGAATAGTAATATTGAAGCCAAGTCCTGGAAGAAGTCAGACTAGTCTGATTTCAAGTAGTGCAATGTCGTCACCAGTACAAACTCGTGCTGATTTGCAAGGTCAGGAAGAAAGTGACAAATATGCTCGCCATTTCTCACTTAGAGAGCTTAAAAGGAGGCTAAGGCTTGCCATTAATAACAATCGAAAGGATGTCATGAGTAGTACTTTCCAGAAAGATGATTCAACACAACAGTTCATTCTCGAGAGTATGTCGACAAGTATGGACTCTTCTGAATGTGAAAAGGCTGAGAAACCCTCAATAGTTGACAAGAAAACAATCCCTGAAGATAGTGGAAGTGGCATGGGGAATGATGCTACTCATTGTGCTAGCTCTTTCTTCTACGAAAAAGCTAAGAAGCATCTAATCGAGAGGCTAGACAATCAAAAGAATGACACTTCTCAGATCGTACACAAATCAGAACCCTTTGGGAAATTACTTTCATATTCGGAGAATGATACGTTTTCTCAAACTGATTGTCCTCAAGAGGATGTTAAACTGTCAGAGGATTCGACTGCTTCATCAGCATTACTGACGACTGAACAAGAGGATATTTCATCAAATTCTGACCCACCAATGAAGTTTGGGGAGCTAATACCATTGGACACCAGCACATCGGCTAACACACAGCTGGATGAATTTAAGACAGACCATGCCAGTCATCCAGTCAAAGAGGGCACTATCTCGCAGGAGTTAACTAGTGAAGGGATTGACAGCATGAATGATGCAACAGATACCCCCCAAGTCTCTATTCAGATCGAAACTTCAACTGAAAGCTTGGAACAAATAAATACCGACCAATGCTTCGCAGAGGAGTCACAAACCATGAATGCATTACCAGAAGTATCCCTGCACACTCCAGAAAAAGTTAACGAGCAATTCAATCATAGTCCATCGGCAGTTGTTGGATTAACCAAGCCATCCATCTTGACATTTTCTTGCTCCCCGGAGAATGCAGATGACAAAGAGGAGAGACTGAGCCCTCAATCTGTTCTAGATTCTTTCCTGGGAGATGGTATCAGCCCCAGCCACAAAACTCGAACGCAAGATGAATTGTCCATGCCAAGCACAAGGATTCTGTTTAAAGAGGATGACACTCCCTCGGGAACCCCAACTTTGCAAAACACACCACAAGAAGCTATTTTGGATGATAAACAGGCAAGGCTTTCCTTCATAAAGGTTGTGCTTGAGGCTTCAGACTTCTTGTCTGAGGAAAGTTCAGAGATATGGTATGTGGACGGATCACTGCTTGACACATCTGTATTGGCTGAAGTAGGAACTTTGTACTGCCTGACAGACGATGCGGTGTTTCTCTTTGATTGTGTGGAAGAAGCTCTTTGCAAGATCAGGGATAACTTTTTTGGTTGTGACCCTTGGGTAGCTTATCTGAAACACAGTGTGAGGCCAGCTCCGGTAGGAACAGGGCTCATTCAAGAGGTGGATAATTGCATCGATTCTCTTGTCAGTGATGAGGTTCCAAGTACATTAGATCGGGTGGTGCTGAAAGACCTGGAGAGTGGATCATGGATGGACCTTCGGGTTGATACTGAAGAAGTTGCTATAGAGGTGTGGGATACTTTGCTTGATGATTTACTGGAGGAAATGGTGTTTGACTTGTGGCTTTAA</cdnaseq>

Protein Sequence

<aaseq>MAKKSYKQRCKSEKVHMGCMSGLIHMFDFRRSPKLISDGTIRRSSVRSDLKGSEDFHGIIFSDEDKDYGVKTIHASRPSIKALMEEEMASGTQILKETQRNIFGIRSDDLKSVNLQEGSDVDLDLATSLMELYRNHNGSRDIITSEVSDHSSSLIDKEHNTDASTHPKQISCSIEKALEAVAEAVITHQSANGKYTSSSYEARPNEFLDALQLLSANEEFFLMLLKDPSSRMLQCLQSLYTALGNPMLELAEDDKQTKSKVTINSLEQSEVSKYSVQKKHNFFLKEDKLVMRRPPKLNDSPRGVSRIVILKPSPGRSQTSLISSSAMSSPVQTRADLQGQEESDKYARHFSLRELKRRLRLAINNNRKDVMSSTFQKDDSTQQFILESMSTSMDSSECEKAEKPSIVDKKTIPEDSGSGMGNDATHCASSFFYEKAKKHLIERLDNQKNDTSQIVHKSEPFGKLLSYSENDTFSQTDCPQEDVKLSEDSTASSALLTTEQEDISSNSDPPMKFGELIPLDTSTSANTQLDEFKTDHASHPVKEGTISQELTSEGIDSMNDATDTPQVSIQIETSTESLEQINTDQCFAEESQTMNALPEVSLHTPEKVNEQFNHSPSAVVGLTKPSILTFSCSPENADDKEERLSPQSVLDSFLGDGISPSHKTRTQDELSMPSTRILFKEDDTPSGTPTLQNTPQEAILDDKQARLSFIKVVLEASDFLSEESSEIWYVDGSLLDTSVLAEVGTLYCLTDDAVFLFDCVEEALCKIRDNFFGCDPWVAYLKHSVRPAPVGTGLIQEVDNCIDSLVSDEVPSTLDRVVLKDLESGSWMDLRVDTEEVAIEVWDTLLDDLLEEMVFDLWL</aaseq>

Gene Sequence

<dnaseqindica>1..136#237..289#1041..2511#2592..2686#2776..3022#3148..3725#ATGGCAAAGAAGAGTTACAAACAGCGGTGCAAATCTGAGAAGGTCCATATGGGCTGTATGTCGGGCCTCATCCACATGTTTGACTTCCGTCGCAGTCCAAAACTTATTTCAGATGGGACGATTAGGAGGAGTTCAGGTGAGGAATTTAAGTGGAATGCAATGTCATCTGAACAAAAAGAATGATGTAAGCTGCAGTGTAATGATATTGCTTATGATAAATTCTGTGCTTCATGCAGTCAGAAGTGACCTGAAAGGTTCTGAAGATTTCCATGGAATCATCTTTTCTGATGTAAGTCATCCATATATACCTATTTCATCTGTTTTTTGTATCTGAAAGTTCAAAGTCACATGTCTGTTTCACAGAGAAAAAACATGCGTTTGCGCTAGCAAAACTGATTAGAAAGGAAACAAAGACTGAAGTTTAGTTCCCAAATTTAACTTACTGTTGCTTTTTACTTGTTGGACAATTTGTTTTTCATCATTATGTTACTTGTTCTACAAGTGTACAGTGTTACAATTGCTTGATTCCTATGGGCAAAATGTTGATTGTCATCAACATTCTTGAATACTTGTAATGTTGATGTACTAATAACAGATGCTTCTGCTGGCAACTGGAGTAAATAGTACTGTTAAAGCATTGATGTGAAAAGCTTTAGTATATGTACAAAGCTTTTCAAGACATTTTTACGAATATTTAAGTGTGATTAGCTGAATTACCTACAGAATCTCATGGCTGGATTTGAAAACAACTGTATTTTCTATGAGACTCGAGTGCCACCGATTGAAACATATAGTAACATATTCACTTTGTTTTAGCAATTGCAAACAGCTTTATTAGCTTTTATTATATTACAGATGAAATAGTTTCTATTGCCAAATATATTAATTAGAATTCTCACAGAAAAGGTTACAAATAAAAAATATTTGTCGTATTAGTTTTATGGAGGATTAAATATGCATAAGTATTTGTATCCAGAAATATTTGTAGGCATTTGAAGATAACATCTGAATATAGAAAACCAAATTTATTTGCTTGTCAGGAGGACAAAGACTATGGGGTTAAAACAATTCATGCCAGCAGGCCAAGTATTAAAGCACTGATGGAAGAAGAGATGGCCAGTGGAACGCAGATCTTGAAGGAAACACAAAGGAACATATTTGGGATACGTTCTGATGATTTGAAGTCTGTGAACCTGCAGGAAGGATCTGATGTTGACCTAGACTTGGCTACAAGTCTCATGGAATTATACAGAAATCATAATGGCAGTCGCGATATTATCACTTCGGAAGTATCAGATCACTCTTCCAGTTTGATTGACAAAGAGCACAATACTGATGCTAGTACTCATCCTAAACAAATCTCCTGTAGTATAGAGAAAGCACTTGAAGCTGTGGCTGAAGCAGTAATAACCCATCAATCTGCAAACGGGAAATACACAAGCAGCAGCTACGAAGCTAGGCCCAATGAATTTCTTGATGCATTACAATTGCTGAGCGCAAACGAAGAGTTCTTTCTGATGCTTCTGAAAGACCCAAGCTCTAGGATGTTGCAATGCCTGCAGAGCCTGTACACGGCACTAGGAAATCCCATGTTAGAACTGGCAGAAGATGACAAACAAACAAAGTCGAAAGTTACCATTAACAGTCTAGAGCAGTCTGAGGTTTCGAAATACAGCGTGCAAAAAAAACATAATTTTTTCTTGAAGGAGGATAAGCTAGTCATGAGGAGACCACCAAAACTGAATGATAGTCCTCGTGGCGTTAGCAGAATAGTAATATTGAAGCCAAGTCCTGGAAGAAGTCAGACTAGTCTGATTTCAAGTAGTGCAATGTCGTCACCAGTACAAACTCGTGCTGATTTGCAAGGTCAGGAAGAAAGTGACAAATATGCTCGCCATTTCTCACTTAGAGAGCTTAAAAGGAGGCTAAGGCTTGCCATTAATAACAATCGAAAGGATGTCATGAGTAGTACTTTCCAGAAAGATGATTCAACACAACAGTTCATTCTCGAGAGTATGTCGACAAGTATGGACTCTTCTGAATGTGAAAAGGCTGAGAAACCCTCAATAGTTGACAAGAAAACAATCCCTGAAGATAGTGGAAGTGGCATGGGGAATGATGCTACTCATTGTGCTAGCTCTTTCTTCTACGAAAAAGCTAAGAAGCATCTAATCGAGAGGCTAGACAATCAAAAGAATGACACTTCTCAGATCGTACACAAATCAGAACCCTTTGGGAAATTACTTTCATATTCGGAGAATGATACGTTTTCTCAAACTGATTGTCCTCAAGAGGATGTTAAACTGTCAGAGGATTCGACTGCTTCATCAGCATTACTGACGACTGAACAAGAGGATATTTCATCAAATTCTGACCCACCAATGAAGTTTGGGGAGCTAATACCATTGGACACCAGCACATCGGCTAACACACAGCTGGATGAATTTAAGACAGACCATGCCAGTCATCCAGTCAAAGAGGGCACTATCTCGCAGGAGTTAACTAGTGAAGGTATATTGTTGTCCTCCTGTTTATCTTTTTAGTTTTCTACTTCCTTGTTTTCATCTAATAAATACACCAAATGTTTGCAGGGATTGACAGCATGAATGATGCAACAGATACCCCCCAAGTCTCTATTCAGATCGAAACTTCAACTGAAAGCTTGGAACAAATAAATACCGACCAAGTAAGCCATATGTTTTTGCAAATTGTACAAAAAGTTAAGTTAGTAATTAATTTTGCGTCTAACTTTTCTTTTACTCCCCCGTGTTGAAGTGCTTCGCAGAGGAGTCACAAACCATGAATGCATTACCAGAAGTATCCCTGCACACTCCAGAAAAAGTTAACGAGCAATTCAATCATAGTCCATCGGCAGTTGTTGGATTAACCAAGCCATCCATCTTGACATTTTCTTGCTCCCCGGAGAATGCAGATGACAAAGAGGAGAGACTGAGCCCTCAATCTGTTCTAGATTCTTTCCTGGGAGATGGTATCAGCCCCAGCCACAAAACTCGAACGCAAGGTATTGAATTCAAAATAAGAACTTCCCCTTTTGAATTTCCCTTTTTTAAGATAGTGGAAGTACCCTTTTGTATTTTCTTGAAAAATCCATGGTAAAGTAGCACAATTTTATTGTGCTTTATGCAGATGAATTGTCCATGCCAAGCACAAGGATTCTGTTTAAAGAGGATGACACTCCCTCGGGAACCCCAACTTTGCAAAACACACCACAAGAAGCTATTTTGGATGATAAACAGGCAAGGCTTTCCTTCATAAAGGTTGTGCTTGAGGCTTCAGACTTCTTGTCTGAGGAAAGTTCAGAGATATGGTATGTGGACGGATCACTGCTTGACACATCTGTATTGGCTGAAGTAGGAACTTTGTACTGCCTGACAGACGATGCGGTGTTTCTCTTTGATTGTGTGGAAGAAGCTCTTTGCAAGATCAGGGATAACTTTTTTGGTTGTGACCCTTGGGTAGCTTATCTGAAACACAGTGTGAGGCCAGCTCCGGTAGGAACAGGGCTCATTCAAGAGGTGGATAATTGCATCGATTCTCTTGTCAGTGATGAGGTTCCAAGTACATTAGATCGGGTGGTGCTGAAAGACCTGGAGAGTGGATCATGGATGGACCTTCGGGTTGATACTGAAGAAGTTGCTATAGAGGTGTGGGATACTTTGCTTGATGATTTACTGGAGGAAATGGTGTTTGACTTGTGGCTTTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA014561