Os12g0617100

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Gene Name

Os12g0617100

Description

Similar to Translation initiation factor eIF-2B delta subunit (eIF-2B GDP-GTP exchange factor) (Guanine nucleotide exchange factor subunit GCD2) (GCD complex subunit GCD2)

Version

NM_001073819.2 GI:297613536 GeneID:4352805

Length

5928 bp

Definition

Oryza sativa Japonica Group Os12g0617100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:26442329..26448256

Sequence Coding Region

26443191..26443253,26444879..26444933,26445019..26445115,26445195..26445939,26446245..26446612
,26446822..26446965,26447816..26448167

Expression

GEO Profiles:Os12g0617100

Genome Context

<gbrowseImage1> name=NC_008405:26442329..26448256 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:26442329..26448256 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggatctgcggcggccgacgacgcgctcctcgtcggggggagtggagccgaggtaccggcaggtcggcttcgtcaccaccactgccgagcccgccgcggcggcggcgtcgtcttcctcctccccgcgtggctccgacgtctacccggggtcgctctcccccgtgatgatcccgcccccgcgcatccccgaccacctcaccgccctttctcccgcccccgtctcgctcctgccctcctccccgccgccgccttcgtcatcccgcctcgacgccgcagaatccgacctcgacgacgacgacgacgacgacgttgacgtctcgtgggcgcggccacctccacctgcccttctcgaatcaaaggaaggtcttcctgatacacagaatgaaggtgctccagctccagccccagttcaacaaaaacagaagctttctaaagcagagagacgtgctattcaggaagctcagcgtgcagccaaagcttctgcaaaggaggcagggttatcaagaaaatctgtagccacagtttctacttctaatgctgcaatgtcaaaacaactcaaaactgtaaagacacctcccaagaaagatctgccccaacttacacctccagttgcttctgaaaagaagactagtgagcaccctcctgacagagatagaaagaaagatgttcctccccctcgtatgcagtttgataatgtacatcgggtggagaaaacaaagaagcattcactggtcaaccaagcagaagcacaaaacagagtcgaattgttcaggcatctgcctcaatatgtacatggaactcagcttcctgacctcgagtcaaaattttttcatcttgatctaatgcatccttctgtctacaaggttggacttcaatttttgtctggtgttatatcaggtggcaatgcttgttgcgtagcaatgcttcttgctttcagagaggccataaaagattactctacaccttccaccaaaactctcaaccgagatcttactgctaaaatcagtagctacgtgtcatttctcatcgagtgcaagcctctttcaatcagcatgggcaatgctattaggtttttgaagaacagaattgccaagctattgcttacattgtctgagtcagaagctaaagctagcctacagtctgacattgatcggtttataaatgagaagataataattgcagaccatgtcattgttagccatgcaatagccaaagtcagagatgatgatgtattactgacatacgcatcatcctctgttgttgaaatgatttttgatcatgctaatgagcttggaaagaagtttcgtgttgttgtggtagattctcgtccgaacaacgagggacaagcactattgcacagattagttgcaaagggcatcagttgcacatatacgcacattaatgccatctcatacatcatgcatgaggtcacaagggtttttttgggtgcctcttcgatattgtcaaatggagcagtttactccagcgttgggacagcagctgtagcaatggttgctcatgcctttggagtgcctgttttagtgtgctgtgaggcgtataaattgcatgagagggttcaacttgattctatatgctctaatgaacttggtgatccagatgttatttcaagagttcctgagagggaagatttgtgccaccttaaaaactgtacttataatgaaaatctacaacttctgaatcttaagtatgacactatgccttccgactatgtttctatgatcataacagaatatggaatgctcccacctactagtgtgccagtcattgtgagagagtaccgcagggagcacatatggatatag</cdnaseq>

Protein Sequence

<aaseq>MDLRRPTTRSSSGGVEPRYRQVGFVTTTAEPAAAAASSSSSPRG SDVYPGSLSPVMIPPPRIPDHLTALSPAPVSLLPSSPPPPSSSRLDAAESDLDDDDDD DVDVSWARPPPPALLESKEGLPDTQNEGAPAPAPVQQKQKLSKAERRAIQEAQRAAKA SAKEAGLSRKSVATVSTSNAAMSKQLKTVKTPPKKDLPQLTPPVASEKKTSEHPPDRD RKKDVPPPRMQFDNVHRVEKTKKHSLVNQAEAQNRVELFRHLPQYVHGTQLPDLESKF FHLDLMHPSVYKVGLQFLSGVISGGNACCVAMLLAFREAIKDYSTPSTKTLNRDLTAK ISSYVSFLIECKPLSISMGNAIRFLKNRIAKLLLTLSESEAKASLQSDIDRFINEKII IADHVIVSHAIAKVRDDDVLLTYASSSVVEMIFDHANELGKKFRVVVVDSRPNNEGQA LLHRLVAKGISCTYTHINAISYIMHEVTRVFLGASSILSNGAVYSSVGTAAVAMVAHA FGVPVLVCCEAYKLHERVQLDSICSNELGDPDVISRVPEREDLCHLKNCTYNENLQLL NLKYDTMPSDYVSMIITEYGMLPPTSVPVIVREYRREHIWI</aaseq>

Gene Sequence

<dnaseqindica>5004..5066#3324..3378#3142..3238#2318..3062#1645..2012#1292..1435#90..441#cgcttcggcttctgctgcttccgcgcagaagaagaccaattcctcgcgccacctccaccaccgcctccgccgccgccgtggacgccgggatggatctgcggcggccgacgacgcgctcctcgtcggggggagtggagccgaggtaccggcaggtcggcttcgtcaccaccactgccgagcccgccgcggcggcggcgtcgtcttcctcctccccgcgtggctccgacgtctacccggggtcgctctcccccgtgatgatcccgcccccgcgcatccccgaccacctcaccgccctttctcccgcccccgtctcgctcctgccctcctccccgccgccgccttcgtcatcccgcctcgacgccgcagaatccgacctcgacgacgacgacgacgacgacgttgacgtctcgtgggcgcggccacctccacctgcccttctcggtatgcgattcgcggcctccaaatctgacccctctataacaaatcattcctgcgatttttgcaactgttagagatgattgttttagctatactttttctaactaatcattcctatgatttctgcaacggttagagatggatagtgttagctctaatttttctaacaaaccattcctatgatttctgcaatggttagagatggataggttttggtttaattttactgataagactgcataacatcaagcggtatttgcaacattagttagtttgcataagtatattgcttttaatgttacctttgcagttttgctattgccaatacagttgacaaggcagtaaaaaatggcatatcgcttgaccactgattccaagtcttttaggacaaaacttattggtaccggaccacaatctgctagcctactatagctcactttccggggaccctactgcatgacctgatcatttttcacagtggcttggagtcgacggcagagtgttgaaacatataatttatctctggagactaaatattgtaattcaggcagcgaaattgatgccaaatcaatgttaacttgttagcaaagaattcggtattcatgatggatgaattatcatacaacgctggccacaaagaggagattgagattgtcattcatgttgtttatatctatgggtattgcattattgcactatgtccatgtggctttcactgtatatttatgttaagtattcacaagctagttagatgcaaatggctgagaattaccgatcagcattcctttaaaaactattttaaagaatgaccatatacaagctgtacatatttttcttctgctctttattttagaatcaaaggaaggtcttcctgatacacagaatgaaggtgctccagctccagccccagttcaacaaaaacagaagctttctaaagcagagagacgtgctattcaggaagctcagcgtgcagccaaagcttctgcaaaggaggcaggtagtttgcctgctttttactcaatctagatttcattattctaggttggtttgtggttaaattatgatagtattttacctgctggaatgaaggacaagtttttgcttttttggctgggtgggggtatatatagttctgtatcaatcagataaagtcttctgtgccacacctttcactgacatgcaccatctgtcttattcaaatttcagggttatcaagaaaatctgtagccacagtttctacttctaatgctgcaatgtcaaaacaactcaaaactgtaaagacacctcccaagaaagatctgccccaacttacacctccagttgcttctgaaaagaagactagtgagcaccctcctgacagagatagaaagaaagatgttcctccccctcgtatgcagtttgataatgtacatcgggtggagaaaacaaagaagcattcactggtcaaccaagcagaagcacaaaacagagtcgaattgttcaggcatctgcctcaatatgtacatggaactcagcttcctgacctcgagtcaaaattttttcatcttgatctaatgcatccttctgtctacaaggtacttatcaaatactgcaattcagatatgcagtaagcagtaacgacacatgccgatgtttttccttggggatttgggttgcctaaactattgtataagatgaatatatttgtaggagaatgttgatttgttctgtcttgcattactgcttctctggtggttaaagttaacataaaaaaaaaacaggcgaaaaaagcttttcattttcttgttttctaataggactggttactgctaaattaggtgaatagcaattatcttatttgacctctgtaaatatcttatgtgactgttctacgtttcaggttggacttcaatttttgtctggtgttatatcaggtggcaatgcttgttgcgtagcaatgcttcttgctttcagagaggccataaaagattactctacaccttccaccaaaactctcaaccgagatcttactgctaaaatcagtagctacgtgtcatttctcatcgagtgcaagcctctttcaatcagcatgggcaatgctattaggtttttgaagaacagaattgccaagctattgcttacattgtctgagtcagaagctaaagctagcctacagtctgacattgatcggtttataaatgagaagataataattgcagaccatgtcattgttagccatgcaatagccaaagtcagagatgatgatgtattactgacatacgcatcatcctctgttgttgaaatgatttttgatcatgctaatgagcttggaaagaagtttcgtgttgttgtggtagattctcgtccgaacaacgagggacaagcactattgcacagattagttgcaaagggcatcagttgcacatatacgcacattaatgccatctcatacatcatgcatgaggtcacaagggtttttttgggtgcctcttcgatattgtcaaatggagcagtttactccagcgttgggacagcagctgtagcaatggttgctcatgcctttggagtgcctgttttagtgtgctgtgaggcgtataaattgcatgagagggttcaacttgattctatatgctctaatgaacttggtactatatcattcttgcttgtaaattaagttattgattaagctttcctcaagacttaactcatgacatgtttactcaggtgatccagatgttatttcaagagttcctgagagggaagatttgtgccaccttaaaaactgtacttataatgaaaatctacaacttctgaatcttaagtacgtgcctgaattccatagatgttatagctggtcattatgtttctcatgttggataatcaatcgaatttcgttcacctgataggtatgacactatgccttccgactatgtttctatgatcataacagaatatggaatggtaagatgtgttcctttctacttctaaatcaattcctcatgcttatattcaaatcatattatacccatgttaacttcgtttctttttgctgctgttttttgtgcttgtaatagttcaatataatgctatcatatgctgaccgagttttaaaattgttagtacagtaccacttggattcatcgaccttgagctgcaaatttgtctccctttcttgctaatgagtaaccacaaccccataactttaacttcagccaagtcaataatgaaaactttttttctgttaggttttgactaaatattgctctagaaaaaggcaatacttatatctagcagtataacggttgcacttatctatggcagggaacacttagctgaatatgttttgctattatttatttttatctttgttgcaagaaggaatctgctaggtatactgggtctcacagtcagtgagcaccagataatctctgatacagagatattctttcatttgattattgttagagtatatggttactggttaggattgataggatccggttgttatggtaggataggattagcttccatcttatctctcagggattgcttaaggtccaaaacctactcatcaaggttcaatatggcaattacaattgcgcagtacatctcttgtacacactttcaattatgtctatacccacaactttttttctaaaaatataactaagccacatatataagtagtcgctgtcatcttaaaaatagtaggaccagtattggcacaatattgttgtttttgtatatgtcctaacaaaattatctttcagaaagctgccttatttggtctaatagtcagatctgtctgcccccaactggccttggatttggacagccgtaccatatgcctcggcagatatgcgagctgtcttcaaactgatgcgttattttacacatgtgatgtaaactttatgagtcacatacctgattgcaataagaatggcatacagaaaagaaaaagagacaaaatataacatggtccttaatagttcaataattgttgactatgtctaatttgaactgtacttctctcatgagtgcaggtttaattgttcttaatctagtttggaatatctctatgccatctagtctttagttctttacactaattgctttctcattgatttatatatcttttgtttgatactagtctggtgtcttcaaaagtcatagttttattgattaatatgaggacgtgaccttcacctttcatagtttcatagtgaaaatactcgtgcattggctgcataacttgatcctacatcagtgctattaagagttctatgacacaaatagttatttctgaaatttcagttagtcttttttactagttggtgattctcgatgatagtcatggtctcatggatgaaaacaagcagttttgcttgcagttacttcccattatatttcttgtgcatactgtttgttttgtctgcataaccagtctgatattaatacacgctatactcaaatttctgcttttgttagtcttatatttctctaccactcccctactgttttgttcatcatttaagatggctgtctcatttggtccattgaattgatgttttgtcctgctgtcgcagctcccacctactagtgtgccagtcattgtgagagagtaccgcagggagcacatatggatatagaacgaatgatattttccttgatgatttaatgagttggatttttaatatgaggtatgataatttgaatatggtgtgctgccttggcatggtgttgcggtcttgtggacacctgattatgctttaaaaaaagaccaaaacatcttttttttattttctcaaccttgaaaggtgtgttatctcatgtagtttctttaattaagctgaagtaatccaaataaaaaacttcaatcaccattgctaagtatggataatgtgccgatgattccacccttcttcattaggtatatatcactgtttattccttgttatgtaaataaatcttctcacgtttgattaactcatggggtgttctttatagtagattggtacatgaggaccctacatgaagtaaaatatgctatgcaaacttacaaggtctaatgcagaggagttcacatgatcccaaatctagtcagactagaacatgataaatgtgatagaagagcatatttgtaatctttgttaatcatgatttgcctcatttcatctaaaagtgcttttaaatcttttaatttttgttgtagttttgtaggttcatctataacttgcactgacaattggaatacttaatcatttaggcgagagcaaacaaccagccaacaaggaatgcagttttggatgtagataggacgggtcatgcaggaaaagtctcacatgtgaacagatgctagatccaaggatttctagctcgcttgttatcttcagtatttgtattcatactaaatgtgactgttgattagtacacagacttgttatcctgtactgaggtgaccagacatgaatttcaatggcacatcagttaacaccgcttttctacttcatc</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0617100, RefSeq:Os12g0617100