BGIOSGA014639

From RiceWiki
Revision as of 04:01, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA014639| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA014639, complete gene.| tag = OS04G05...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA014639

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA014639, complete gene.

LocusTag

OS04G0538700

Ensembl Transcript ID

BGIOSGA014639-TA

Ensembl Protein ID

BGIOSGA014639-PA

Length

5171

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:25718090..25723260

Sequence Coding Region

25722124..25723260,25721167..25721300,25718090..25718381

Genome Context

<gbrowseImage1> name=IndicaChromosome04:25718090..25723260 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:25718090..25723260 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGTCCAGCATGTCGGACTCGGGGACGGGCGGCCGCGGGGGCGCGGAGCTGATGGTGGAGCAGTTCCACCTCAAGGTGCTCCATGCCGTGCTCGCCGTGCGCGGGCCGCGCCCGCTGCAGCCGGCCGCGTCGGCGTCGTTCAGGCGGCGGGACAGGTGGTTCCACCTCCCGCTCCACGATCCGCAGCCTCCGCCCGCGGCGGAGGGAGTGGAGGCGCCGGAGGCGGGGGAGCCGCTCGTGGTGGACATCCTCCTGGCTCACGCCGCAGCCGGCGGCGGCGGCGGCGGCGGAGCGGGCGGGGAGGTGGTGGAGAGATGGACGGTGGTGTGCGAGCCCTGGCCGGACGCCGCGGCGGGCGAGGGGATACCCGTGAACCGGGCGTACAAGCGCTGCATGACGATGCTTCGGTCGGTGTACGCCACGCTCCGCTTCCTGCCGGCGTACCGCGTCTTCCGCCTCCTCTGCGCCAACCAATCCTACAACTACGAGATGGTCCACCGCGTCGGCTCCTTCGCCGTGCCGCTCTCCCGCGACGAGGAGGCCGCCATGCGCTCCTACCAGTTCGTCCCCGTCGAGACGCAGCACGGCCGCCTCGTCGTCTCTGTCCAGTACCTCCCCAGCCTCGCTGCCTTCAATCTCGAGATCTCCTCCTTGTCGCCCTCCATGCTGATCGCCGACTACGTGGGCAGCCCTGCTGCCGAGCCAATGCGTGCCTTCCCAGCTTCGCTCACAGGAGCCACAGGTTCCGCTTTCCCGCAGGCGCTGTCCAATCAGCCGCAGCGCCCGCACAGCTGGGCGACGCCAGCGCTCTGGCCGCAGGCGCCTAGGCAGCAAGCTAGATTTTCGCCACCTCATTTGCTCAACGCATCACCCACTCCATCGCCACCCAATTTTCCCAGCGGGTATCTTCAATCTCGTCCTAAGGGAGGGTCTGCACCAATGAGCATACCACAGGTGGGTGACAGGAGGAGCCCAATTCACCGGCCGATCACATTGCCACCAACGTCTCCGAGGAGAGTAGGGGAGACAGGAACATCTAGTGCACAACAGTCTCCATCAGAGAGATGCCCCTCGTTTGGGAGGGCAGATGGATTTCGAATAATGGATCCCTATGCAAGCTTGTCGCCAGGACGCAAGGGCAAGGACACTAAGGACGAATCTGGCAGGTTCTCTGCACTCTCCTCCTGTGATTCCCCTCGACAAGATGATATAGATGATGCAGATTATCCCTTTGCTGTGGATGATGTTGATACACCGAGCTCCCAGCCTGGGAGCAGTGATGGGAAGGAAGCTAGAGATCAGGCAAGTTCGTCGTCCCATAAATCACAAGATGCCGCAGTTGGCTCTCTGGTGCACCTGCTCAAAACTGCACGCCCTCTGCGAAACTCTAATTGTCCATCTCAAGCATCAGCGGTTGAATCTAGTGAAGCAGCCTCAACCAGTTCTGTCGTGTCCCGTAGGAAATCTGATGCACTCGAAGAGCTCCAATCATTTAAAGAAATCAAGGAGAGGTTGATGTCCCGGAGTAGAGCAAAACAGCAAGAGCCACCAGAAAAACCATAG</cdnaseq>

Protein Sequence

<aaseq>MSSMSDSGTGGRGGAELMVEQFHLKVLHAVLAVRGPRPLQPAASASFRRRDRWFHLPLHDPQPPPAAEGVEAPEAGEPLVVDILLAHAAAGGGGGGGAGGEVVERWTVVCEPWPDAAAGEGIPVNRAYKRCMTMLRSVYATLRFLPAYRVFRLLCANQSYNYEMVHRVGSFAVPLSRDEEAAMRSYQFVPVETQHGRLVVSVQYLPSLAAFNLEISSLSPSMLIADYVGSPAAEPMRAFPASLTGATGSAFPQALSNQPQRPHSWATPALWPQAPRQQARFSPPHLLNASPTPSPPNFPSGYLQSRPKGGSAPMSIPQVGDRRSPIHRPITLPPTSPRRVGETGTSSAQQSPSERCPSFGRADGFRIMDPYASLSPGRKGKDTKDESGRFSALSSCDSPRQDDIDDADYPFAVDDVDTPSSQPGSSDGKEARDQASSSSHKSQDAAVGSLVHLLKTARPLRNSNCPSQASAVESSEAASTSSVVSRRKSDALEELQSFKEIKERLMSRSRAKQQEPPEKP</aaseq>

Gene Sequence

<dnaseqindica>1..1137#1961..2094#4880..5171#ATGTCCAGCATGTCGGACTCGGGGACGGGCGGCCGCGGGGGCGCGGAGCTGATGGTGGAGCAGTTCCACCTCAAGGTGCTCCATGCCGTGCTCGCCGTGCGCGGGCCGCGCCCGCTGCAGCCGGCCGCGTCGGCGTCGTTCAGGCGGCGGGACAGGTGGTTCCACCTCCCGCTCCACGATCCGCAGCCTCCGCCCGCGGCGGAGGGAGTGGAGGCGCCGGAGGCGGGGGAGCCGCTCGTGGTGGACATCCTCCTGGCTCACGCCGCAGCCGGCGGCGGCGGCGGCGGCGGAGCGGGCGGGGAGGTGGTGGAGAGATGGACGGTGGTGTGCGAGCCCTGGCCGGACGCCGCGGCGGGCGAGGGGATACCCGTGAACCGGGCGTACAAGCGCTGCATGACGATGCTTCGGTCGGTGTACGCCACGCTCCGCTTCCTGCCGGCGTACCGCGTCTTCCGCCTCCTCTGCGCCAACCAATCCTACAACTACGAGATGGTCCACCGCGTCGGCTCCTTCGCCGTGCCGCTCTCCCGCGACGAGGAGGCCGCCATGCGCTCCTACCAGTTCGTCCCCGTCGAGACGCAGCACGGCCGCCTCGTCGTCTCTGTCCAGTACCTCCCCAGCCTCGCTGCCTTCAATCTCGAGATCTCCTCCTTGTCGCCCTCCATGCTGATCGCCGACTACGTGGGCAGCCCTGCTGCCGAGCCAATGCGTGCCTTCCCAGCTTCGCTCACAGGAGCCACAGGTTCCGCTTTCCCGCAGGCGCTGTCCAATCAGCCGCAGCGCCCGCACAGCTGGGCGACGCCAGCGCTCTGGCCGCAGGCGCCTAGGCAGCAAGCTAGATTTTCGCCACCTCATTTGCTCAACGCATCACCCACTCCATCGCCACCCAATTTTCCCAGCGGGTATCTTCAATCTCGTCCTAAGGGAGGGTCTGCACCAATGAGCATACCACAGGTGGGTGACAGGAGGAGCCCAATTCACCGGCCGATCACATTGCCACCAACGTCTCCGAGGAGAGTAGGGGAGACAGGAACATCTAGTGCACAACAGTCTCCATCAGAGAGATGCCCCTCGTTTGGGAGGGCAGATGGATTTCGAATAATGGATCCCTATGCAAGCTTGTCGCCAGGACGCAAGGTGATCCATGGTTTTAAAGCCTCCAATATGCTTTCAACTTATATTTGATACTTGTGTATGCCTTATCTTCATCACTGCTCAATACTGGATCCTTCATGAATCATATAACTTTTGAGAGTGAGTGTAAGGCAATTCATCTGGTATATCTGAAGTAGACTTTTCTGTTTTCATGTGGCTGAGTAGAGCCTACTGGCATTTACCTTGGAAACTAGGAAACAAACTCTACCAAGAGCTATTTCAAGTCAATGTTTAGCAGTACATATTCACAAGTTTAAGTTGTTATGTTAAGTTTAGCTTCATGATATTGTGCAACAAACCATGTTTGATAGTGGAATGTAAGCCATTATTAGTACTGGAGTTGAAGCAGCCTAAATACTGTTTGTTAGCATATACACCATTTAGCTCTCATCTCTCCTTTTTTTTTTGGCAAAAAATAGACTACATATCAGGGTCTCTTATTAGTTGTGAACTGTTTCGATTGTCTCTTGGTTCTTGCTGAGACCATATTATTTGTTGAAAAGAAATGCGTTCATAGTACTTGTTGAAACAGAAGAATGGTTGTTGAGTTAGTTATTTTCTGAGGCTTACCCAAAAGCAGCTTTTGATCTTCAAATGGTTGGATATTTGGATTACCCTTGTCTGCTGCAATATATGTCTGCTCTTGTACTTTTAATTTTTATTTAGTGGATTGCCTTTATGGGACTTAATCTTATCCTCTGCATTAGCTATGGATAACTTATTTATCTTCCTCTAGCTATTGAAGCCAGGAAAAAAATATGTATTTGAGTTGGGTCTGCGTTGACACCGTTTGACCCATGTGCAGGGCAAGGACACTAAGGACGAATCTGGCAGGTTCTCTGCACTCTCCTCCTGTGATTCCCCTCGACAAGATGATATAGATGATGCAGATTATCCCTTTGCTGTGGATGATGTTGATACACCGAGCTCCCAGCCTGGGTATGTATGGTAGTAACTTAAATATTCTATCTATAGATTTGATGAATTTCGCCATTTGCTAGGGCAGTAGTGCATCAGATAAAGCCAGAAACGAATTACATGAAGTCTTATCTATTCATATGAAATACGAAGTACTAGCTCCTATCCGTTATATTTTGGGAGGGAGGCAGTACTAAGTTGATTTAGTATCCATAGATCTAGTTGTTAAAGAATGCTAGAGGCTATCCGGTTACACAAATATTTGATCGTTAGAGCTATCAAATCCTATTATGTTGCACATTATTTGATTTTTTTTTTCAAAAGTTTAAATATGACATTAAGGGGACTAAGGATTTGAAAACCTTTTGGACATGTTATTTTGTCATACTACAAAACTAGTGTTAGAATAACTGGTAGAGATAGCAAAAAGGAATAATAAAAATGAGGGTTATTGGCTTAGTTAACATGGACTCGGTGTGCCTTGATCGACAGCTCTACCAATATGTAGTTTATTGCAAAGATCTAGATTTTGCATAGTTACCAGTTCTTAAGTTTCTTTGCTTTATAGTTAGAGTGAACACAATCATATGTCAGAGCTAACAGTTGCTACAAATGCAAAGCACAAATTTGGACTTGACTCGATGACTTTTTCTTTTTGCAACTTCTAAGTTCTAACCTCTATGTAACCTGCCTCTTAGTCACAATCAACAAGTTTTAACATATTAAAATGTTTTTTAGACAAAAGGCCAAAGCCAAGCTATTTATAGAAAGCATAGGTAGATAGAAGAGTGTAGTCGGGATTACCGGCCATCCTGGTAAAGTTTCTGGAACAAAATAGCCACTAGGCTACAACTCGACAATGATTAACACACTGGCCAACAACCAAAAGCGATATCAAGATACAACCAGAACGGCAGAAAGAAACTAACAAAGCACTTATAAAAGATTAAATTGTACTAGTGGTCATCAAACACATATCAAACATGTCCTACATGTGCAAGTATGTTTGTTATGGCTTGGCCCTGGACTTAAATGGCAAAGGGTGTAGTTGTGCTCGACAGGAGGGTGCAGCCTGAACCCTCACCTCCCTGGAACCCTGGAAGAGAACAGAGTGACAGGACAGAAGAGAGTAGGCTAAGTTCTTGCTTGTGTTTAATAATGAATGCCACCTCTGTTGTATAGAGAAGGTCGTTTGCAATATCCAAATAATGTTCCTAACGATCCTCAACAATAGCTAAACAGACCTAACCAAGAAAATGATACGCAAACTAACATTTAACTGATCAACGGCACTGATTAATCCTGTAGTAACACATAATCTGGCTTGCTGGGTCGACCGAACTTATGTCCTCACATAACAAGGTAATGGTCACTCAAACCTATGCCATCACAGTAGCTGGCATGGCATTGATGCCTATGGGTTAGGCAAATTTGCTTGCTAATGACTTCTGTGAACACCTAATGAAGTTTATTTACCTATTACACCAAAATCTAAGCTAGTTGAACTACTTGCACGTGTGAGATAAGTCTGCAGAAGAGCTCCAGGAAAGTACAATTCAGCACTTTATTTTCTTAATGACAATCCATACAATATGGGCCTTCCCCTACAGTTCACCATAAAAATCAATTACAGAACCATTGAAAACAGAAATCTACAACCCCAACCGGCAGTCACTGTACCACCATATTGAGTGAACAACTTGAATGGCGAGAAATGCTACATCTGACAAGCTAGATGGATAGCACATGGGAGAGGGATGATGATTATTCAGGGATGCTGATTGCTGAGTATCTGGTTTGTGGTCGAGGGTCAAATTTCAGGCCTTAGGAAGAGTGAATTGCTCAAATGGAGTTTTCCTTTTACTTTTATTACACTCGTACATAAATTAAATAGTAAATTTCATAGAACCCCCGGTATTATGGTCCAAATTGCAGAAAACCACGGGGGTTTTGGCACGTGACACATAACCTTGGGTATTATATTATAGTACTATAGTTTTATAAAACCACACTGTCAAGGCGTCAACAAATTTAACTTGACATTGTAGCAAAATAAAAAATGCTTAACTTAGATGGCTAAAGTTTTTTATGATAGATAAAAAAATTCATTAATTCGAGTTTTGAGATTTGATATTAGAAACTCATACTTATGATGAAACAAAGAACAATTGGTTAACAATGAGGTTTTGTGAAACTCTAGAACCATGATATCCGGGGTTGTGCCACATGCCAAAACCTTTGTGGTTTTGTTCAACAAGGACCATAATACTAGTGGCACGGTTCTAATTTCCCCAAATTCTAGTGGCACGTAGCCGATATCGTGAATAGTAGTGGCATTTATCTAAAATGGCATATTTGTAGTGGCATGTCCTAATACATAAGGTTATGTGAAATTTACTCTAAATTAAACATCTAGTTTTGCTTGTTTGGGCGGTCATTGTTATGTGGTGCCAAAATAGGATAATTATATTCAATGCATTGAGCTACATTTGTTGCGTGATAGTCTATATGGTGTATTGAATAAGATGATTAGTCTATTTTACTATTCCCAGTGCCATCAGATATTCTTTTGACGCAGCACCCTATATTAACAGGAGATTCAGATCTAATATAACCTTATCTGGATATGTGCCTCTATTATTATTCACCCCATTCATGTTTATCTTTGTTGAGCTGTACCCATGGCTTTTGATAAAATATAACAGTTATGTATGTCCTCTTGTATTTCTACTATTCGGTTCTTTGTTTCCACTACTGAGTTTCTATGGTTCTAACACCGTTTCTATATGCACTATATAATATACAGGAGCAGTGATGGGAAGGAAGCTAGAGATCAGGCAAGTTCGTCGTCCCATAAATCACAAGATGCCGCAGTTGGCTCTCTGGTGCACCTGCTCAAAACTGCACGCCCTCTGCGAAACTCTAATTGTCCATCTCAAGCATCAGCGGTTGAATCTAGTGAAGCAGCCTCAACCAGTTCTGTCGTGTCCCGTAGGAAATCTGATGCACTCGAAGAGCTCCAATCATTTAAAGAAATCAAGGAGAGGTTGATGTCCCGGAGTAGAGCAAAACAGCAAGAGCCACCAGAAAAACCATAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA014639