Os12g0618600

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Revision as of 10:37, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os12g0618600| Description = Similar to Transcriptional activator HAP2| Version = NM_001073825.1 GI:115489611 GeneID:4352811| Length = 4312 bp| ...")
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Gene Name

Os12g0618600

Description

Similar to Transcriptional activator HAP2

Version

NM_001073825.1 GI:115489611 GeneID:4352811

Length

4312 bp

Definition

Oryza sativa Japonica Group Os12g0618600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:26573343..26577654

Sequence Coding Region

26573916..26574299,26574552..26574695,26575236..26575304,26575428..26575528,26576650..26576887

Expression

GEO Profiles:Os12g0618600

Genome Context

<gbrowseImage1> name=NC_008405:26573343..26577654 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:26573343..26577654 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgatgagcttcaacaagagccaagaaggatttgggcaggttgctgctgtggccaccctggcctccaatggaggaggctctctaccatggctgctgtacggcgagccactggggcaggggaagccggccatgtcgccggagggcgtggtgccgagagcacagactcctctggatcctcctcaggttccagccatggacaggggtgtccctgaaattctgaacttctccatggttccaggtaaaggagaaaaatgttctgagcactcaactactattgctctgcagtcaccatttgcagaatataatggctgttttgagctgggccttggtcaatctgtggttccctctaattatccttatgctgaccagcactatggcctactttctccttatggagtgagaccaacgcctagcgggcgaattcttattccaccaaatatgccagctgatgcaccaatttatgtgaatgcaaaacagtgttcagccatcattcgacgtcgccatgctcgtgccaaggcagagagggagaataggctggtcaaagctagaaaaccatatcttcacgaatcacgccatcttcatgcaatgcgtcgtgcaagaggctctggtgggcgcttcctcaacacgaagaaagagaccaatgggaaaaccactggtggaggcaggaaggtgatggacatcatcatcccgcctctgtgccccgccgcatctcccagctcggagcagtgcaacccaagcagcgtttccagcctgtccgggtcagaggtgtcgagcatatatgaacacgaagacatggaccacttccatagctttgatcatctccggacacacttcttcaccccgctcccgagcctcatggatgtcgagcacggggctggtaaccccttcaagtggacagcagcctctgatggctgctgtgacctcctcaaagcatga</cdnaseq>

Protein Sequence

<aaseq>MMSFNKSQEGFGQVAAVATLASNGGGSLPWLLYGEPLGQGKPAM SPEGVVPRAQTPLDPPQVPAMDRGVPEILNFSMVPGKGEKCSEHSTTIALQSPFAEYN GCFELGLGQSVVPSNYPYADQHYGLLSPYGVRPTPSGRILIPPNMPADAPIYVNAKQC SAIIRRRHARAKAERENRLVKARKPYLHESRHLHAMRRARGSGGRFLNTKKETNGKTT GGGRKVMDIIIPPLCPAASPSSEQCNPSSVSSLSGSEVSSIYEHEDMDHFHSFDHLRT HFFTPLPSLMDVEHGAGNPFKWTAASDGCCDLLKA</aaseq>

Gene Sequence

<dnaseqindica>3356..3739#2960..3103#2351..2419#2127..2227#768..1005#gctgctgctgaaagcctgatgaaatgtgagtgggccttcttgtttctttctttgctatactccacactcccccgtgcatgccttggatcctttcggtttggtttcttgctgctcagtgggagattcttgcatctgctgcacatgcacctgctggctgtggctgtggcctatgcttactagtagtagtagtagtagctcaccttgttattgagaagttcttggttttgtgactcctgtgggttattgaagttcttggtttcagttgggaaggtgaaaagaggatttctggattcttgggaaggtttgatcttgcatttattcacccaaggttgtttgttcatgtggtttggggggtctttttctttttgttactaataatttacccaagtgtgagactttgtggctcttttgatgcatatgtttgtatggtgattggccatgggttctttggtaaagttggttcttggtctgcttcatctgccttgttactatcttccttttgctaatcttgttctgcttagattgtcttttctcttggggcatcctttgcattttggctaatcttgtcatctccttttgaagtttcacctctcttcctgcatctcactacctgatttggtgcttagtctaatccaattcctttttggttcttgtgattgcagtgggtgattaggtgcttaacataatcccaatcctagaaaaatacattcggagtggttgctgctgagctcaaccaatcaagcttgttggggaggcaagcagtcacaatgatgagcttcaacaagagccaagaaggatttgggcaggttgctgctgtggccaccctggcctccaatggaggaggctctctaccatggctgctgtacggcgagccactggggcaggggaagccggccatgtcgccggagggcgtggtgccgagagcacagactcctctggatcctcctcaggttccagccatggacaggggtgtccctgaaattctgaacttctccatggttccaggtgaggctgcctgttcttggtttcatggtttgtgagtgaaatggacttggttgatgtatctgtggatggtaacagcaaagagttagggaattatgtgcaacatatgtgagtgacatagggttggattcaggttgcaaaaaaaagaaaaaaaaactaaatatctaaaatatctagttttggtataaagttggcactgatttgctgttatttctttgttgcttaaatgtgaaaatggatttgattgatgtctctgtgaatgttatagcaaaaagtaagtactaggcaattatatgcaacatatgtgagtgacatagggttggattcaggttgcaaaagtctagttttggtataaagttgccactggtttgcagttatttctttgttgcttgaatgtgaaaaggtttgatttttggatgagaggttaatccctgagccaagggtgtgtatctctgtaagcacaactagtaggcttattgccatgttatcattagatggttttttcggttgcaaaagtctatatagatatgcaagtccaaaagtaatattagcagaaaataattaatattacagatgaaagtattgccatgttatcattagatggttttttcggttttcacggaaaggctgctcgcatgtacttaggcaaatcgtgaaagtactacagtagggattaatactgtgtaacagtcatatatttggtttaggttagaaactgttgatgatttggttttgcagtaaaaaaaagatagtgtcaagcaacatgtgccagagaaatgctgatacttctgggttacaaaatttttttctttgatacaaggtgacatgacaccaaagcaacttcaacccttctacattaattatttaccgcacaatctagtatggctaatttggtccctctgaaacttataatacatcatagcctgataggtcaagatggcatgagtacaaggacccacaaatgtttaaattcttcttttgacattggttaccacataattgtgttggttagactagacaagaaccttgaatcatgcatgaacaatcttttgtttctgataataagagtacagaccgtcattgactgcttctgttttatgattggacatctaattgcttttcaggtaaaggagaaaaatgttctgagcactcaactactattgctctgcagtcaccatttgcagaatataatggctgttttgagctgggccttggtcaatctgtggtaagctttcccctctatttgtttatgttgacgcattgaataaagatcatcgaccttacagatgaacatgcccatttccgaatttccctagtgctgagttgagaaatggcttcaatgtttcaggttccctctaattatccttatgctgaccagcactatggcctactttctccttatggagtgagaccaacggtatgtttctgttgatctctgaggagtcatcttgagattttctctgactctgaagaaaacacagctaactgtagcaacactatcaccaaactaacacatatatagagcactttgatcaattgtgcccttgaattccacagtttgaacagtcttgtgcaacaattcttttgtttgctgcaaattggtttactgtttttgtatgtgttgggatttgtgaacattgattaagctcaccagtgctttaatcaatccaataaataaagaaaaaaatgctttagcatcttattcaccagtgcagaaagaacgggtaaataataggcaggtatggctaaagctttggtaataatagcaggcgcagtttcatgatgtttggacatacttgctgttgcgatttttttctccctcttggtagtccagcaaagatgtaaaacggactgttttttgtttcaagctgtagtttttcaactggcataatctattgaaagctctaaattatgcacgctaactaatatgttcctctattttctttgtggaatgcagcctagcgggcgaattcttattccaccaaatatgccagctgatgcaccaatttatgtgaatgcaaaacagtgttcagccatcattcgacgtcgccatgctcgtgccaaggcagagagggagaataggctggtcaaagctagaaaagtaagtctcaactttcaactgtcgatggattctttcagttttgcaattttgtacatatctttgtaagaacttatccttctttttaaaaattaccattggggtttcccatactgtattgggcaaaaaaaggaaaaggaaagaactatcaatgaatccaaaactgttgcctaagtgagatgttttgattccatttccactttatctcgcagaatttcttctcttctgcattcatgtgagttctctttgatgcagccatatcttcacgaatcacgccatcttcatgcaatgcgtcgtgcaagaggctctggtgggcgcttcctcaacacgaagaaagagaccaatgggaaaaccactggtggaggcaggaaggtgatggacatcatcatcccgcctctgtgccccgccgcatctcccagctcggagcagtgcaacccaagcagcgtttccagcctgtccgggtcagaggtgtcgagcatatatgaacacgaagacatggaccacttccatagctttgatcatctccggacacacttcttcaccccgctcccgagcctcatggatgtcgagcacggggctggtaaccccttcaagtggacagcagcctctgatggctgctgtgacctcctcaaagcatgactagaggggggatacaccgggcagccgaagctggcaaacatcagcagtttctgctggatacattgcccagctccaggtcagggattgtccctgctggtattggctgtctgtaggcaactcattcttggctgatcggttccgctcatcgcctacttgtcccggaaactccagcaccggtttctgggatcctgcggtgatcagaacaacccatcgcgtgtaaaaaaaaaaaaaaatcatctatgctatgctgttactgcttgctaccattatctgaactgctactactaggtagcaagcttaatctggcaaggtaaataaagtctggaactttgaactggttccagtggtgatgattgtggtgtgcttgtatcctgataactattgtgagtttgagacctggctttgttgatctactgaactactactgtagcactatgcttgaagtttgtgtgggcttggtttgcagtttgtattgttaaaaaaaactcaaatctagtgatgtattaagaccttgtttgtgtgtatcttgttaatgtggtatatctgcaagaaggtataatctgtttgggagtg</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0618600, RefSeq:Os12g0618600