BGIOSGA014665

From RiceWiki
Revision as of 04:02, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA014665| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA014665, complete gene.| tag = OSJNBA0...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA014665

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA014665, complete gene.

LocusTag

OSJNBA0074L08.23

Ensembl Transcript ID

BGIOSGA014665-TA

Ensembl Protein ID

BGIOSGA014665-PA

Length

3465

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:25284700..25288164

Sequence Coding Region

25287484..25288164,25286721..25286887,25286497..25286594,25285890..25286240,25285393..25285809
,25284700..25285298

Genome Context

<gbrowseImage1> name=IndicaChromosome04:25284700..25288164 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:25284700..25288164 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGTCCAACGTCCCCTTGCTCCTCCTCCTTGTCGTCGCTAGCGCCGGCGCGGGCGATGGAGCCGCGCCGGCGTCGAATGCGCGCCCGTGCGCCTCGCCGGCGGCCAGCGCCTACCCCTTCTGCAACGCCACCCTCCCGTTCCCTGCCCGCGCGCGCGCCCTCGTCTCCCTCCTCACCCTCGACGAGAAGATAGCGCAGCTCTCCAACACCGCCGCGGGCGCCCCCCGCCTCGGCGTCCCGCCCTTCGAGTGGTGGTCGGAGTCCCTCCACGGCGTCTGCGACAACGGGCCCGGGGTCAACTTCTCCTCGGGCCCCGTCCGCTCCGCGACCATCTTCCCCCAGGTCATCCTCTCCGCCGCCGCGTTCAACCGCTCGCTGTGGCGCGCGGCGGCGCGGGCCATCGCGGTGGAGGCGCGCGCCATGCACAACGCCGGCCAGGCCGGGCTCACGTTCTGGGCGCCCAACATCAACGTCTTCCGCGACCCACGGTGGGGCCGCGGCCAGGAGACGCCGGGAGAGGACCCCGCCGTCGTCTCCGCCTACTCCGTCGAGTATGTGAAAGGGTTCCAGCGGGACTACGGAGAGGAAGGCAGGATGATGCTCTCCGCCTGCTGCAAGCACTACATCGCTTATGATTTGGAGAAATGGAGGGGCTTTACAAGATACACCTTCAATGCCAAGGTTAATGCGCAAGATATGGAAGACACATACCAGCCTCCTTTCAAGAGCTGCATCCAGGAAGGTCGTGCAAGTTGCTTGATGTGTTCATACAACCAGGTAAATGGTGTGCCAGCATGTGCCCGCAAAGATATCCTGCAAAGGGCTAGAGATGAATGGGGTTTCCAGGGGTATATTACATCTGATTGTGATGCTGTGGCAATAATTCACGAAAACCAGACATACACAGCATCAGATGAAGATTCAATTGCCGTTGTTCTTAAGGCAGGAATGGATATCAACTGTGGTTCTTTCCTAATTCGTCATACAAAGTCGGCAATTGAGAAGGGAAAGGTCCAAGAAGAAGATATCAACCATGCCCTTTTTAATCTATTCTCTGTTCAGCTCCGTCTTGGTTTTTTTGATAAGACCAATGAGAATCAGTGGTTTACACAATTAGGACCCAACAATGTGTGCACTACAGAGCATAGGGAACTTGCAGCAGAAGCTGTAAGGCAGGGTACTGTCCTTTTGAAAAATGATAACGGTTTTTTGCCTCTAAAGAGAAGTGAAGTTGGTCATATTGCTCTTATTGGACCAGCTGCAAATGATCCATATATATTAGGCGGTGACTACACAGGTGTCCCTTGTCATTCTACCACCTTTGTTAAAGGCATGCAAGCATATGTTCCCAAAACAACCTTTGCTGCTGGATGTAAGGATGTTCCATGTAACTCAACGGATGGATTTGGTGAAGCGATTGAAGCAGCTAAGAGAGCTGATGTTGTTGTTCTAATTGCTGGGTTGAACCTGACTGAAGAAACGGAAGATCATGATAGAGTGAGCCTTCTCCTTCCAGGCAGGCAGATGGATCTCATACATACTGTTGCCAGTGTAACAAAGAAACCCGTTGTGTTGGTACTCATGGGTGGTGGTCCTGTTGATGTTTCATTTGCAAAGCATGATCCACGTATTGCGAGCATTCTTTGGATTGGTTATCCTGGCGAGGTTGGTGGAAATGTTCTTCCAGAAATCCTTTTCGGGAAATACAACCCAGGAGGAAAGCTGCCCATAACTTGGTACCCTGAATCCTTCACTGCTGTTCCGATGGATGATATGAACATGAGAGCTGATGCGTCACGTGGTTACCCAGGAAGAACATACAGATTTTACACTGGAGATGTAGTATATGGGTTTGGGTATGGTTTGAGCTACTCAAAATATTCGTACAGCATCTTGCAGGCCCCAAAGAAAATCAGCTTGTCCCGTTCGTCAGTTCCAGATCTTATCAGCAGAAAGCCTGCATACACAAGGAGGGATGGAGTAGATTATGTCCAAGTTGAAGACATTGCCTCATGCGAGGCGCTGCAATTTCCTGTTCACATCTCGGTTTCCAACGATGGTGCCATGGACGGGAGCCATGCCGTTCTATTGTTCGCGAGTTCGAAACCAAGCTTTCCAGGATCCCCTATAAAACAGCTAGTTGGCTTTGAGCGTGTGCACACTGCCGCTGGCAGATCAACCGATGTGGAGATCACCGTCGACCCCTGCAAGCTTATGAGCTTTGCCAACACCGAAGGCACAAGGGTGCTGTTCCTGGGAACACATGTTCTGATGGTGGGAGACGAAGAGCACGAGTTGCTCATCGAGGCATGA</cdnaseq>

Protein Sequence

<aaseq>MSNVPLLLLLVVASAGAGDGAAPASNARPCASPAASAYPFCNATLPFPARARALVSLLTLDEKIAQLSNTAAGAPRLGVPPFEWWSESLHGVCDNGPGVNFSSGPVRSATIFPQVILSAAAFNRSLWRAAARAIAVEARAMHNAGQAGLTFWAPNINVFRDPRWGRGQETPGEDPAVVSAYSVEYVKGFQRDYGEEGRMMLSACCKHYIAYDLEKWRGFTRYTFNAKVNAQDMEDTYQPPFKSCIQEGRASCLMCSYNQVNGVPACARKDILQRARDEWGFQGYITSDCDAVAIIHENQTYTASDEDSIAVVLKAGMDINCGSFLIRHTKSAIEKGKVQEEDINHALFNLFSVQLRLGFFDKTNENQWFTQLGPNNVCTTEHRELAAEAVRQGTVLLKNDNGFLPLKRSEVGHIALIGPAANDPYILGGDYTGVPCHSTTFVKGMQAYVPKTTFAAGCKDVPCNSTDGFGEAIEAAKRADVVVLIAGLNLTEETEDHDRVSLLLPGRQMDLIHTVASVTKKPVVLVLMGGGPVDVSFAKHDPRIASILWIGYPGEVGGNVLPEILFGKYNPGGKLPITWYPESFTAVPMDDMNMRADASRGYPGRTYRFYTGDVVYGFGYGLSYSKYSYSILQAPKKISLSRSSVPDLISRKPAYTRRDGVDYVQVEDIASCEALQFPVHISVSNDGAMDGSHAVLLFASSKPSFPGSPIKQLVGFERVHTAAGRSTDVEITVDPCKLMSFANTEGTRVLFLGTHVLMVGDEEHELLIEA</aaseq>

Gene Sequence

<dnaseqindica>1..681#1278..1444#1571..1668#1925..2275#2356..2772#2867..3465#ATGTCCAACGTCCCCTTGCTCCTCCTCCTTGTCGTCGCTAGCGCCGGCGCGGGCGATGGAGCCGCGCCGGCGTCGAATGCGCGCCCGTGCGCCTCGCCGGCGGCCAGCGCCTACCCCTTCTGCAACGCCACCCTCCCGTTCCCTGCCCGCGCGCGCGCCCTCGTCTCCCTCCTCACCCTCGACGAGAAGATAGCGCAGCTCTCCAACACCGCCGCGGGCGCCCCCCGCCTCGGCGTCCCGCCCTTCGAGTGGTGGTCGGAGTCCCTCCACGGCGTCTGCGACAACGGGCCCGGGGTCAACTTCTCCTCGGGCCCCGTCCGCTCCGCGACCATCTTCCCCCAGGTCATCCTCTCCGCCGCCGCGTTCAACCGCTCGCTGTGGCGCGCGGCGGCGCGGGCCATCGCGGTGGAGGCGCGCGCCATGCACAACGCCGGCCAGGCCGGGCTCACGTTCTGGGCGCCCAACATCAACGTCTTCCGCGACCCACGGTGGGGCCGCGGCCAGGAGACGCCGGGAGAGGACCCCGCCGTCGTCTCCGCCTACTCCGTCGAGTATGTGAAAGGGTTCCAGCGGGACTACGGAGAGGAAGGCAGGATGATGCTCTCCGCCTGCTGCAAGCACTACATCGCTTATGATTTGGAGAAATGGAGGGGCTTTACAAGATACACCTTCAATGCCAAGGTGATGAATGTTTTGGTCCCTTCACAATCCACTTACCAATTTTGCTTCTTGATGGAGGAGTAGCTGACCTTATTAGATTTGCTCGGTAGTTAGTCCCTTACGGTATATGCCTTCATTTAATTTTTGGGGTCCCCTTAATTATGCCAGACACAACAGCAGCGCTCATGCTTACACAGTTGAATCTTCTGAACTTGTGCAAACATGCTAATAATAGAATATTGGATATCATACTAGCACAGTACTCGACCAGTCCATATGCACACAAAAATTTCATGCGGATTCACCTTCATGAAGTAAAAGTTTCAAAGTGGGTGCATCTGTTGTGTAGCCCTTTCCTTCTCCTTATTAACACATAGATCTCCTGCAAGTTCTTTAAAAAAGAGTAGTCTATCCTGATGCTAATGAGATATTGAATCAATAAATGGATTGATCCTTCAGTTGAAAATTTCCTTTTCCTGTTGTTTGGTGTGCAATATTCAACCAAAGTATCAAAACGCATTCTTCTTTTTTACATTAATCAGAATGCAAGCTTGGAATCAGGTTAAGAATGTTTTGATTTTTGAACCTATAAGCAAGAAGGCATTAGTTATTGACAGGTTAATGCGCAAGATATGGAAGACACATACCAGCCTCCTTTCAAGAGCTGCATCCAGGAAGGTCGTGCAAGTTGCTTGATGTGTTCATACAACCAGGTAAATGGTGTGCCAGCATGTGCCCGCAAAGATATCCTGCAAAGGGCTAGAGATGAATGGGGTTTCCAGGGGTATACTACTTTCTCTTGCCCAGAACATTACTTGATCCTTGAATACTGATATTGGCAGAAAAAAAAATCCTAATATCAACCCAAACCTGCACTACTGTTTATGTGTGCCCATTTGATTATTTGAAGGTATATTACATCTGATTGTGATGCTGTGGCAATAATTCACGAAAACCAGACATACACAGCATCAGATGAAGATTCAATTGCCGTTGTTCTTAAGGCAGGTTGGTGGCCTGTGACATTCTCTCTCTCTGTAACAAGTTGCTGTCTTTGTAGACTAGGAGTTTGACTTCTCAAAGAACTTTTCTGCTCAATAAGCAATTTCAAATCATATATTAGGGGACACCTGTGTAAAGTTTCAGCACCTTCTTGAAATTGAAATATCTGAGAACCACTCCGGAGTCCTGAGTACCCTTCAAGCAAGCCTATAAAATTTCTTGCTGAGGTGCTATCGATGACTGATCCTTTTTTTTCTTCAAGGAATGGATATCAACTGTGGTTCTTTCCTAATTCGTCATACAAAGTCGGCAATTGAGAAGGGAAAGGTCCAAGAAGAAGATATCAACCATGCCCTTTTTAATCTATTCTCTGTTCAGCTCCGTCTTGGTTTTTTTGATAAGACCAATGAGAATCAGTGGTTTACACAATTAGGACCCAACAATGTGTGCACTACAGAGCATAGGGAACTTGCAGCAGAAGCTGTAAGGCAGGGTACTGTCCTTTTGAAAAATGATAACGGTTTTTTGCCTCTAAAGAGAAGTGAAGTTGGTCATATTGCTCTTATTGGACCAGCTGCAAATGATCCATATATATTAGGCGGTGACTACACAGGTTTTTACCACTGACATCAATAAAAAATCTGTCTTACTTTACTGTTTTACATACATTAATGGTAATTTTAATTTCTCCAGGTGTCCCTTGTCATTCTACCACCTTTGTTAAAGGCATGCAAGCATATGTTCCCAAAACAACCTTTGCTGCTGGATGTAAGGATGTTCCATGTAACTCAACGGATGGATTTGGTGAAGCGATTGAAGCAGCTAAGAGAGCTGATGTTGTTGTTCTAATTGCTGGGTTGAACCTGACTGAAGAAACGGAAGATCATGATAGAGTGAGCCTTCTCCTTCCAGGCAGGCAGATGGATCTCATACATACTGTTGCCAGTGTAACAAAGAAACCCGTTGTGTTGGTACTCATGGGTGGTGGTCCTGTTGATGTTTCATTTGCAAAGCATGATCCACGTATTGCGAGCATTCTTTGGATTGGTTATCCTGGCGAGGTTGGTGGAAATGTTCTTCCAGAAATCCTTTTCGGGAAATACAACCCAGGTGAGTAAATAAATTTCTTATAAAGAAAAGCTCATTTGAGTGCAGTGTAGTGAAAACTTGCAGCGGTTGCTAATCTTGTGCACTGTTATTATAGGAGGAAAGCTGCCCATAACTTGGTACCCTGAATCCTTCACTGCTGTTCCGATGGATGATATGAACATGAGAGCTGATGCGTCACGTGGTTACCCAGGAAGAACATACAGATTTTACACTGGAGATGTAGTATATGGGTTTGGGTATGGTTTGAGCTACTCAAAATATTCGTACAGCATCTTGCAGGCCCCAAAGAAAATCAGCTTGTCCCGTTCGTCAGTTCCAGATCTTATCAGCAGAAAGCCTGCATACACAAGGAGGGATGGAGTAGATTATGTCCAAGTTGAAGACATTGCCTCATGCGAGGCGCTGCAATTTCCTGTTCACATCTCGGTTTCCAACGATGGTGCCATGGACGGGAGCCATGCCGTTCTATTGTTCGCGAGTTCGAAACCAAGCTTTCCAGGATCCCCTATAAAACAGCTAGTTGGCTTTGAGCGTGTGCACACTGCCGCTGGCAGATCAACCGATGTGGAGATCACCGTCGACCCCTGCAAGCTTATGAGCTTTGCCAACACCGAAGGCACAAGGGTGCTGTTCCTGGGAACACATGTTCTGATGGTGGGAGACGAAGAGCACGAGTTGCTCATCGAGGCATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA014665