BGIOSGA014682

From RiceWiki
Revision as of 04:02, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA014682| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA014682, complete gene.| tag = OsI_167...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA014682

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA014682, complete gene.

LocusTag

OsI_16708

Ensembl Transcript ID

BGIOSGA014682-TA

Ensembl Protein ID

BGIOSGA014682-PA

Length

4609

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:25002691..25007299

Sequence Coding Region

25007041..25007299,25004961..25005149,25004679..25004767,25003892..25004215,25003642..25003787
,25003097..25003189,25002691..25003000

Genome Context

<gbrowseImage1> name=IndicaChromosome04:25002691..25007299 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:25002691..25007299 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGTCCATGGCATTACTCTCGCTGTCGCTGGCCGTGGCGTTCCTGGCCGCAGCGTCGGCTGCAGGCGCCACCGGCGCGTCCCGGAGCATGAGGCGGCCGGAGGAAGACCTCGTGGCGGGGTTGCCCGGGCAGCCGGATGTCCGGTTCAGGCACTACGCCGGCTACGTCGGCGTCGGCAACGGCAAGGCGCTCTTCTACTGGTTCTTCGAGGCCGAGAAGGAGCCGGAGAAGAAACCGCTCTTGCTGTGGCTCAACGGAGCTGTGAATCTGCTGTTCCTTGAAGCGCCCGTCGGCGTGGGGTTCTCCTACACGAACCGGACATCTGATCTCCGACGCCTCGGCGATCGTGTGACGGCGCAGGACTCGTACAGCTTCCTCCTAAACTGGCTGAACAAGTTCCCAGAGTTCAAGAATCGGGACTTCTATATTGCCGGAGAGAGCTATGCTGGGCACTATGTCCCACAGCTCGCAGAGCTAATCTACGACGGTAACAAAGGAGCCAGCAGAGACAGAGTCATCAACATCAAAGGTTTCATGATCGGCAACGCGGTGCTGAACGACGCGACGGACCAGATGGGCATGGTGGAGTACGCGTGGAGCCACGCCATCATCTCCGACGAGCTCTACTCCGCGGTGCGCCGGGAGTGCGACTCGTTCAAGGAGGAGGAGGACGGCGGCAAGCCAAGCAAGGGCTGCTCCCCGGCCGTCCGCGCCTTCCTCAGGGCCTACGACGACATCGACATCTACAGCATCTACACCCCGACGTGCCTCTCCTCCTCCTCCTCCTCCTCCCCCGCGTCCGCATCGCCGCGCCGCTCGTCTCCCGGGCTCGTCGCCGCGCCCCGCCTCTTCTCCAAGCACGAGGCGTGGCGCAGGATGCAGCGCGTGCCGGCGGGGTACGACCCGTGCACGGAGGAGTACGTGAAGGGGTATTTCAACCGCGAGGACGTGCAGCGCGCGCTGCACGCGAACAGGACGGGCCTGAGCTACCCGTACTCCCCCTGCAGTGAGGCCATAAGTAAATGGAACGACTCGCCGTCGACCGTGCTCCCCATCCTGAAGAAGCTCATGGGCGCCGGGCTGCGCATCTGGGTTTACAGCGGTGACACGGACGGGAGGGTGCCGGTGACGTCGACGCGGTACAGCCTGAACACGATGAAGCTGCGGCCGCGGCTGATGCGGAAGACCGCCGGCGATGGCGCCGGCGAAGAGTCGGAGTGGGGCGGGTGGCGCGCGTGGTACGACAGGCAGCAGGTGGGCGGGTGGGCGGTGGAGTACGAGGAAGGCCTGACGCTGGTGACGGTGCGCGGCGCCGGGCACCAGGTGCCGCTCTTCGCGCCCCGGCGGTCGCTCGCCATGCTCTACCACTTCCTCCGCGGCAGCTCGCTGCCCGCTTCGCGCTCCCGCTGA</cdnaseq>

Protein Sequence

<aaseq>MSMALLSLSLAVAFLAAASAAGATGASRSMRRPEEDLVAGLPGQPDVRFRHYAGYVGVGNGKALFYWFFEAEKEPEKKPLLLWLNGAVNLLFLEAPVGVGFSYTNRTSDLRRLGDRVTAQDSYSFLLNWLNKFPEFKNRDFYIAGESYAGHYVPQLAELIYDGNKGASRDRVINIKGFMIGNAVLNDATDQMGMVEYAWSHAIISDELYSAVRRECDSFKEEEDGGKPSKGCSPAVRAFLRAYDDIDIYSIYTPTCLSSSSSSSPASASPRRSSPGLVAAPRLFSKHEAWRRMQRVPAGYDPCTEEYVKGYFNREDVQRALHANRTGLSYPYSPCSEAISKWNDSPSTVLPILKKLMGAGLRIWVYSGDTDGRVPVTSTRYSLNTMKLRPRLMRKTAGDGAGEESEWGGWRAWYDRQQVGGWAVEYEEGLTLVTVRGAGHQVPLFAPRRSLAMLYHFLRGSSLPASRSR</aaseq>

Gene Sequence

<dnaseqindica>1..259#2151..2339#2533..2621#3085..3408#3513..3658#4111..4203#4300..4609#ATGTCCATGGCATTACTCTCGCTGTCGCTGGCCGTGGCGTTCCTGGCCGCAGCGTCGGCTGCAGGCGCCACCGGCGCGTCCCGGAGCATGAGGCGGCCGGAGGAAGACCTCGTGGCGGGGTTGCCCGGGCAGCCGGATGTCCGGTTCAGGCACTACGCCGGCTACGTCGGCGTCGGCAACGGCAAGGCGCTCTTCTACTGGTTCTTCGAGGCCGAGAAGGAGCCGGAGAAGAAACCGCTCTTGCTGTGGCTCAACGGAGGTACGAGTACGGCGCGTGATCTCTCTGAGACGTGTGCTCTTTTTCATTGATTTTCTTGTTCTGTGGATGAGTGGATCCCGTGAATGCTGTCCATCCGCCATTGTTTCGTTTGCTCTCGGTTCTTTAAAGTTGCAGAGGAACAGAGGATTGCCAAACTGTTTTTACTCTCCATCGTGTGAATTAAAGTAGACGGCAAGCGCGTTTGCTTCTTGTTCTTGTTTTGGGATTTGCAACATTTCTTGCCTTCGATCTTGTGCTTCCAGTTATCTACTACTATACGTGTTTATAGTAATGAACACAAGGCTAATCTCTCCTCATCTCTCTTTACCTAGAACCTACCTATCTACTATCTATATCTATCCATCTATGGGCTTCAAATGTGGCGATTAGCAAGTCACAATCCGGAAAAGCACAAGCCTGCAGGCCGTGTGGCCACCCTGTCGCAACGGAAGAATTATGCTTTCTGGCAATAAAAGCTCCAAAGCAAGGCAGGCAGGATCCACAGGCGAGGAGGGCATTGATCAGAGCAGTGGGGAGCAAAGCCTCCCAGCCGGTGCAGAAAAAAGACACTGTCAAAAGAGGGCAAAAGGATAAAAGAAGGCTCAAGGCAGCAGTGGTACAAACGAGCAGATCCTGGCATCCTGCAGCAGCTTGGGAAGAAGCTTTGCTTGCCGACGACACGGACAAGGCTAGAGGGAGGGACACAGCGAGTGCCATGTACTCGTAGTTTTCTCCTGGATTCTCTTCTCTCTTTTTTTCCCATGTAGGAGTACTAGCTACCACTGTTAGATCATGCAAGACTTTCACATTGCGTTTTTATCTTTCTCTTGTCCTTTAGCGTTCCTTCGCATGGCTCTAGAGAAGGCTAATGGGGCACCACCAAAGGACATCACATTGAAAGAATAATTAAAAACAGAGATAAGCGTGTAGAAACGGCGCCATTACATCCTTACAAATGTTCTTAAGTCTAATACGAAGGAGTATGTCGTATGATAGTATATAGTATATTGGCTATTGAATGGCTCCGTGGGCATGTAGTGTTACTGTACTGTCATGTGTTAGTGTCGTCATGTGCTTTAGTGTCAGAATAAGAAATCCTAGTGATAACCCATTTTCTTTTATAGGAGGATACTAGGAACGTGAACATGGAGATTTTGCACAGTAAAAAAAATTAGGGCCAGAAAGCAGTGAAAAAACAGTACTCCGTATAGTAGTCACCTTAATTACATGGATATTCGAGCCTTTGACGTTTTGACTGCCAGTGTCCTTTCTGCTTGGCAAATCAGCTGTCTCATCTCCCAGACCTCCACGCTGTCCTCACCCTTGCCATTGTTTTTACAATAAAGCACATGTTGTGTTTAATTCACACTAAAATTAGAAGTTTTATTGAAATTGGAACGGTGCTACGGAAAAGTTAAAAGTTTATGTGTGTAAGAAAGTTTTGATGTGATTGAAAAGTTGGAAGTTTGAAAAAAATTTTAGAACTAAACACGACGACAACAGAATTACTCCCTAGATACTGTACAAGGTACACGTAAAGCCCTAGTACTACTGTACGGTATAAACAACTCTGGAGATCAGGTGACTTGCAGTACAGTCCAACGGATAAGGTTTTTGGGGAGGTAAAAATACTTGTAGCAACTGGTAATCAACATGCTTGATTGTCTAATATAATGTGATCTTGCAGGTCCCGGATGCTCATCCGTCGCCTATGGCGCCGCCCAGGAGCTGGGCCCGTTTCTGGTCAGGAGCTACGGCGAAAATCTCACTCTCAATGCCTACTCATGGAACAAAGGCAAAGCTCTGATTAATTCTTCCTGCCTGAACTCTGAAATTGCTCTTCTGAATCATGTCTGATCGAGCATTTTGCGTCGTTGCTGGTTGCCTTCAGCTGTGAATCTGCTGTTCCTTGAAGCGCCCGTCGGCGTGGGGTTCTCCTACACGAACCGGACATCTGATCTCCGACGCCTCGGCGATCGTGTGACGGCGCAGGACTCGTACAGCTTCCTCCTAAACTGGCTGAACAAGTTCCCAGAGTTCAAGAATCGGGACTTCTATATTGCCGGAGAGAGCTATGCTGGTACAGCCTAAACGTAATTTGTTAGCAGTAAATTTGTTACAGTACTATAAGCTTCATGGTGACCTGCAACTAAAAATAGTAGGAGTACCACTCTCTTCGTCCCTATATATGTGCATCTATATGAGAGGACATGACATATTCAGATACGCTTGATAATCTTGTCGCTGAATCTGACTATGATACGCTTTTGCAGGGCACTATGTCCCACAGCTCGCAGAGCTAATCTACGACGGTAACAAAGGAGCCAGCAGAGACAGAGTCATCAACATCAAAGGTTTCATGGTAAGCACTCTCCCGAAGGAATCCGGGAATAAAAAGAAAGAAGAAAAGAGCCGGACCCTCTTATGCGTGCAATCATGCTGTTAAGATTGCTACTAAGTGCCATGCAGACAGCTTTTACGACGCAAATCATGCTTGAATGCTTAATTAGTGTTCTAGAAAGATAAAGCAAAAGAGAGAATGAAAGGAACCGTGGGGTGATTGATTCTAAAGATGGGCATACGCGTGCATTCGGATATACCCCACTTTACTCGCTTTATGCCGTAGTATAAGAATATCATGGTTTGCGTCGAAACTTTTTTAACTGCGGTAATTATTTCACGCCTGTGAAAGTAGCACTAACATTTCTGCGATTGCTGTACTTTGCAACAATGCAACTAATAATTGCGACGAGTTTAGTTTCTTTCTCTTTTTTTTCACATGGAGTGTGCGATTGATGCGAACAAACTTTTGCTGTCTCGTGCAGATCGGCAACGCGGTGCTGAACGACGCGACGGACCAGATGGGCATGGTGGAGTACGCGTGGAGCCACGCCATCATCTCCGACGAGCTCTACTCCGCGGTGCGCCGGGAGTGCGACTCGTTCAAGGAGGAGGAGGACGGCGGCAAGCCAAGCAAGGGCTGCTCCCCGGCCGTCCGCGCCTTCCTCAGGGCCTACGACGACATCGACATCTACAGCATCTACACCCCGACGTGCCTCTCCTCCTCCTCCTCCTCCTCCCCCGCGTCCGCATCGCCGCGCCGCTCGTCTCCCGGGCTCGTCGCCGCGCCCCGCCTCTTCTCCAAGCACGTAAAAGTTCTCCCTCCCCCCCTCGCCGAGCTAAAACGCCACGGTTTCCGCGAGAAAACGCGCGCGTGATGTGGTCCGTTTTTTTTCTCTTTTGGCTGGTGTAGGAGGCGTGGCGCAGGATGCAGCGCGTGCCGGCGGGGTACGACCCGTGCACGGAGGAGTACGTGAAGGGGTATTTCAACCGCGAGGACGTGCAGCGCGCGCTGCACGCGAACAGGACGGGCCTGAGCTACCCGTACTCCCCCTGCAGGTGCGCACGCTCGCTCTGGTTCTCTGTACAATCTCCCCCACCCATCCCGACATGACGACCTGTGCCGCTGTGCGGTTAATCCCGCGTGCATATGTTAAAGTCTAATAGTATTACTGTACGATCGATACTTCCAGCGACGGACGATCGGTCGATTGTTCATCGTTGTGTATTGATTGACGTATTATTATCCTGCAATTACTCGTCCATCTGCTAGCTGCCTTCCATATTATGGCAGGCAGACCCGTCGTCAGATCTCTGGCGTTGCGACATTGATTCCTCCATATTGTACGCACGCCCTGACCATGCGGTTTACTCCTACTGTAGACAGTAGCAGAATGGCCGTATGGGACAGTAGCAGAATGAGCTGCAGCTCCGGCACCCTGCTCATCAGCTCATGTCATGTAGGGATAAAAAAAAATGTGACTGTAACTCTCTTGTATGTTGTGCTGCAGTGAGGCCATAAGTAAATGGAACGACTCGCCGTCGACCGTGCTCCCCATCCTGAAGAAGCTCATGGGCGCCGGGCTGCGCATCTGGGTTTACAGGTGCACTGCTCGAATCCTCGAAGCACCCACTATAGACACACACTCTGCTGATATCTGTCTTGTTAACGAACGTGTTCGTTTGTGATGGTGGCGCAGCGGTGACACGGACGGGAGGGTGCCGGTGACGTCGACGCGGTACAGCCTGAACACGATGAAGCTGCGGCCGCGGCTGATGCGGAAGACCGCCGGCGATGGCGCCGGCGAAGAGTCGGAGTGGGGCGGGTGGCGCGCGTGGTACGACAGGCAGCAGGTGGGCGGGTGGGCGGTGGAGTACGAGGAAGGCCTGACGCTGGTGACGGTGCGCGGCGCCGGGCACCAGGTGCCGCTCTTCGCGCCCCGGCGGTCGCTCGCCATGCTCTACCACTTCCTCCGCGGCAGCTCGCTGCCCGCTTCGCGCTCCCGCTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA014682