Os12g0620600

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Revision as of 10:37, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os12g0620600| Description = Conserved hypothetical protein| Version = NM_001073829.1 GI:115489619 GeneID:4352816| Length = 4644 bp| Definition ...")
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Gene Name

Os12g0620600

Description

Conserved hypothetical protein

Version

NM_001073829.1 GI:115489619 GeneID:4352816

Length

4644 bp

Definition

Oryza sativa Japonica Group Os12g0620600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:26659801..26664444

Sequence Coding Region

26660143..26661210,26661343..26662038,26662154..26662300,26663827..26664177

Expression

GEO Profiles:Os12g0620600

Genome Context

<gbrowseImage1> name=NC_008405:26659801..26664444 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:26659801..26664444 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggtggcgaggatgtggccgtggccgcctccggcgaggaagttccgtgtcaggctggtggtgcggcgggcggaggggctcacggcgacggcgacggcgacggcgagctcgtcgccggtggcggaggcgaaggtggcggtggaggtgaggtggaaggggcccaaggcgtcgccgctggggtcgctgcggcgggtgatgcacagcaaccggacgcggctggagtcggcggcggaggcggcggtggcgtgggaggaggagttcgagagggtggagacgttcacggcgacgtcgcaccgcaagtccggcgccgccttccacccgtgggacctcgccttctccgtcttcgtcaatgattcaaataaagggccaaagggtgaattgattctgggtaccgcttcactgaacctagcagagtacacatctgcttctgaagaagtcgagataatcctcccattgtcggtgccaaacggttcatccgagtcttccccatcacttcatctcactttgagcctggtggaattaggacctcctcaccaatcacctgatgcttcacagcgttctgctgttaccgctccattgtcaccttccagtggtgactctgttccttccagcaaagatgaggtttcttctgtcattaaagcggggctgagaaatctaaaaattctcacagatctagtgtcgacacggaggtccaaaaagactaaccgagatgatgatggcagtgaggataagtgctatgttcacagtgatggtgctgaatacccttctgatactgactccctcgacgaagatctagatgatagagagcgggatgatggcttagggggttcaactgtcaggaaatccttcagctatggttccttgcagtctgtgaattatgccggtggcctactttatgcacatgcaaggattgatggagagcatgaggactggatatactacagtcaccggaaatctgaagcgggttattctgtagagcaagaggcctcatccactgctgaagaacctgtggtttcagtatcgcggaggagtctgcttccctggaagaagaagaggaaattgaatttacggttattgaaggtactgaagaataaaggggaacctttactgaagaaggggaatgacgaagagggaggtgatgacattgactacgatcggcgattattgaccacttctgacggaaatgctttagagggatcagatagctccatcaatagtatggtgtcaatatttggtgatgataattttgtagttgggaattgggagtcaaaggaagtacttagtcgtgatggccacctgaggttgtctacccaggtgttctttgcatcaattgaccagagaagcgaacgagctgcaggggagagtgcctgtacagcacttgtagctgtcattgcagattggtttgaagcaaaccaggatctgatgccaatccgctcgcagtttgatagccttatccgagaagggtctctggaatggaggaaactctgtgagaacgagacatacagagagcgatttcctgacaagcactttgatcttgaaactgtccttcatgccaagatccgcccactcacagtttcccccaacaggtcattcattgggttcttccagcctgaaagtactgaggatggaagtggattcgatttccttgatggagcaatgtcatttgacaacatatgggatgagattagccgagcagcagagtgctccactgaaaaacctactctatatattgtcagctggaatgaccatttcttcgtcctcaaggttgaggctggcgcatattacattatcgatacacttggtgagaggctgtatgaaggttgcagccaagcttacatcttgaagtttgacgacaacactacaattcacaaagtacctgctgaaaagaaagaagccaaccctgattccagcgggcggttgaaggattcgtcagatagctcatcaactgatcaggacagcggaactgacactgaagagtgcgagctcgtgtcgaagggtaaagaatcatgcaaagagtacatcaagagcttcttggctgccatcccgatccgcgagctgcaggccgacatcaagaagggtatcatagcatcgacgccactgcaccaccgtctccagatcgagttccattacaccgaatcatgccccgaggagatcccgctgcctgctccattacctgccattgaagctccctttgagttctcctggcctgagccgcctcctgccatggaggttaccctagcacccgcagtcgccgccatataa</cdnaseq>

Protein Sequence

<aaseq>MVARMWPWPPPARKFRVRLVVRRAEGLTATATATASSSPVAEAK VAVEVRWKGPKASPLGSLRRVMHSNRTRLESAAEAAVAWEEEFERVETFTATSHRKSG AAFHPWDLAFSVFVNDSNKGPKGELILGTASLNLAEYTSASEEVEIILPLSVPNGSSE SSPSLHLTLSLVELGPPHQSPDASQRSAVTAPLSPSSGDSVPSSKDEVSSVIKAGLRN LKILTDLVSTRRSKKTNRDDDGSEDKCYVHSDGAEYPSDTDSLDEDLDDRERDDGLGG STVRKSFSYGSLQSVNYAGGLLYAHARIDGEHEDWIYYSHRKSEAGYSVEQEASSTAE EPVVSVSRRSLLPWKKKRKLNLRLLKVLKNKGEPLLKKGNDEEGGDDIDYDRRLLTTS DGNALEGSDSSINSMVSIFGDDNFVVGNWESKEVLSRDGHLRLSTQVFFASIDQRSER AAGESACTALVAVIADWFEANQDLMPIRSQFDSLIREGSLEWRKLCENETYRERFPDK HFDLETVLHAKIRPLTVSPNRSFIGFFQPESTEDGSGFDFLDGAMSFDNIWDEISRAA ECSTEKPTLYIVSWNDHFFVLKVEAGAYYIIDTLGERLYEGCSQAYILKFDDNTTIHK VPAEKKEANPDSSGRLKDSSDSSSTDQDSGTDTEECELVSKGKESCKEYIKSFLAAIP IRELQADIKKGIIASTPLHHRLQIEFHYTESCPEEIPLPAPLPAIEAPFEFSWPEPPP AMEVTLAPAVAAI</aaseq>

Gene Sequence

<dnaseqindica>3235..4302#2407..3102#2145..2291#268..618#acatgcatctctcctctcctctcctctcctcgtatattcctccatctcctcctcccgtcccaatctccaatctccaaccctcgcaatcccaaatcccaacccgaccccgacacagatcctctccgctaatcccaattccgccgccaaaatccacccttgcgctgtccccccctcgccaattcgatcttgattttgatttgagaaaatcgcgtgttcttttggagggaagagaagatttgggagttcttttgaagggggggggggttgatggtggcgaggatgtggccgtggccgcctccggcgaggaagttccgtgtcaggctggtggtgcggcgggcggaggggctcacggcgacggcgacggcgacggcgagctcgtcgccggtggcggaggcgaaggtggcggtggaggtgaggtggaaggggcccaaggcgtcgccgctggggtcgctgcggcgggtgatgcacagcaaccggacgcggctggagtcggcggcggaggcggcggtggcgtgggaggaggagttcgagagggtggagacgttcacggcgacgtcgcaccgcaagtccggcgccgccttccacccgtgggacctcgccttctccgtcttcgtcaatgtgagccaccgtctcttcttctcactcttctcctctttcttggttttgcctccttgacgcgtttcaattttttagatagaataaaatttgttcttgttttattgtttgattggttgtgtgaaataaaaataatgaaattttgccttgaatgggattttcatctagaatggactttttttttgtgtgtttcattgtttggttggttggttggttggttgtttgtgtgaaataaaaagagtgaaattttgcctagaatgggattttcatctagaatggagggtttttttttttgggggtttcattgtttgtttggttggttggttgtgtgaaataaagaggacgaaattttgccttcaatgagcgcttttggtttgattggatggaacaattgctgtttgtcatgttagttttcgtccaatgatcaatttaatctgttttgctttggttgtttgaatgattcttgctgataattttttatcttatcattcatgtcacattgacagcgaaagttttgacttttcttttgaaaaagtcaagtctcattggtttattggtaattcccttcaattcgcttggatctaacagaaccataaataatattaaattggttttattttttaccagtcctcactgtaaaaaacatgatgatttaaggagctttaaagaaacagtgttgcatgctattggtttatattggtggttggttttggctttgtacctttctttggcgatgatatgatggttgattggttgggttcttacattttttttttgttggcgatgattaagttatcagcaaattgttgtggccagagtgtggatttattggacgtgccttgatcattatacttttacatgacaacctcaaacaattaaacatttcaagctagatcgtttctgttttaagaaaatgagttatttgaatgtatggtaagtacctctcggatcaacaaacaattatgctacttatttaatagcttggctagcataatttaggttcaatgtatcagaaagcatataactgttttatccgtttagaagttttgacggcaaatcaggaaatgccaaaaaacatctacttattgttctggaaacaaaaggtgaaattagccaatcatgaattgtgaaggattattgtcttttcctgtgccaatttttattatgatgcaattaccgttttgtcgtgttcgattcgactgataggcgagattctcattttgtcgcgttgtttgctttggatatatcgtcattcgtgtttcaatattatttgatctctgctgacaagagaaagaaacagagctaagttgggaattattacagctaacgtaatttgagcaagaatcaaagctaaagttatgggttattacagctaacgttatttgaacaaagctaaagctgggggttatttcagcttttacatgctgttaaccaaacagtaatctatataaacaagcggaacaatacttcttttggcattctcccttgagtttagtctaacttccttggttttgcttttgtccttacaggattcaaataaagggccaaagggtgaattgattctgggtaccgcttcactgaacctagcagagtacacatctgcttctgaagaagtcgagataatcctcccattgtcggtgccaaacggttcatccgagtcttccccatcacttcatgtatgtcagttatacgatgctataaaccagttacattggaatgccaatactattttttgtttctgattctcctcaaatggtcatccattacctgactttaatatccttttttcagctcactttgagcctggtggaattaggacctcctcaccaatcacctgatgcttcacagcgttctgctgttaccgctccattgtcaccttccagtggtgactctgttccttccagcaaagatgaggtttcttctgtcattaaagcggggctgagaaatctaaaaattctcacagatctagtgtcgacacggaggtccaaaaagactaaccgagatgatgatggcagtgaggataagtgctatgttcacagtgatggtgctgaatacccttctgatactgactccctcgacgaagatctagatgatagagagcgggatgatggcttagggggttcaactgtcaggaaatccttcagctatggttccttgcagtctgtgaattatgccggtggcctactttatgcacatgcaaggattgatggagagcatgaggactggatatactacagtcaccggaaatctgaagcgggttattctgtagagcaagaggcctcatccactgctgaagaacctgtggtttcagtatcgcggaggagtctgcttccctggaagaagaagaggaaattgaatttacggttattgaaggtactgaagaataaaggggaacctttactgaagaaggggaatgacgaagagggaggtgatgacattgactacgatcggcgattattgaccacttctgacggaaatgctttagaggtacttatttccttgatatcttgtgaaagagtctttagtttcatttttttgttcatcatatgacatcaatattggacctgtattatcgttggaccattcattatttatagcatatcatcttctcatctgcagggatcagatagctccatcaatagtatggtgtcaatatttggtgatgataattttgtagttgggaattgggagtcaaaggaagtacttagtcgtgatggccacctgaggttgtctacccaggtgttctttgcatcaattgaccagagaagcgaacgagctgcaggggagagtgcctgtacagcacttgtagctgtcattgcagattggtttgaagcaaaccaggatctgatgccaatccgctcgcagtttgatagccttatccgagaagggtctctggaatggaggaaactctgtgagaacgagacatacagagagcgatttcctgacaagcactttgatcttgaaactgtccttcatgccaagatccgcccactcacagtttcccccaacaggtcattcattgggttcttccagcctgaaagtactgaggatggaagtggattcgatttccttgatggagcaatgtcatttgacaacatatgggatgagattagccgagcagcagagtgctccactgaaaaacctactctatatattgtcagctggaatgaccatttcttcgtcctcaaggttgaggctggcgcatattacattatcgatacacttggtgagaggctgtatgaaggttgcagccaagcttacatcttgaagtttgacgacaacactacaattcacaaagtacctgctgaaaagaaagaagccaaccctgattccagcgggcggttgaaggattcgtcagatagctcatcaactgatcaggacagcggaactgacactgaagagtgcgagctcgtgtcgaagggtaaagaatcatgcaaagagtacatcaagagcttcttggctgccatcccgatccgcgagctgcaggccgacatcaagaagggtatcatagcatcgacgccactgcaccaccgtctccagatcgagttccattacaccgaatcatgccccgaggagatcccgctgcctgctccattacctgccattgaagctccctttgagttctcctggcctgagccgcctcctgccatggaggttaccctagcacccgcagtcgccgccatataactcaccatggaagtgcctgccctaatgtttaacatatagagagcctctttttcagggcgaattgtgaagtgaaccagatcaaagatttggcttcgtttctagtttgcactgtttttttgctgtctaattatgatgaactgactagtataggtgaccccccctccccccctttggtgtatgttttctacttttcttcaccttcccttccaggttttagagctttcattttgtaaagaaagaaagggtgtttgctcctagttatcttcacctgtgaagtggcttgtgctcaacttgtaatccttgaaccatatcattatgttaattaagcccttgttatcttct</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0620600, RefSeq:Os12g0620600