BGIOSGA014719

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Revision as of 04:02, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA014719| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA014719, complete gene.| tag = OSJNBB0...")
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Gene Name

BGIOSGA014719

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA014719, complete gene.

LocusTag

OSJNBB0070J16.6

Ensembl Transcript ID

BGIOSGA014719-TA

Ensembl Protein ID

BGIOSGA014719-PA

Length

4085

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:24408376..24412460

Sequence Coding Region

24411843..24412460,24410305..24410571,24408376..24410217

Genome Context

<gbrowseImage1> name=IndicaChromosome04:24408376..24412460 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:24408376..24412460 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCCGACGCGATCTCATGCCTGCAGCCACTGTGCGACTGCTTGGATGGCACCGGCCTGCTCGATGCCGCAGGAAGGGAGGTCGCCTCTTTCCTTCGGCTCAAATCAAATTGGGGTGATCTTGACAAGGCCAGGGAGAGCCTGGGGGCTGTTGAGAGGATGGTTCGAGGGCGGGTAACCGCGGAGTTAAACAAGCTGAACGTCTGTGATCCTCAGGTGGAGCTGTGGCTGAGGCGTGTCGATGAGCTGAAGCTGGGTGCCATTGATGAGGACTATAGCAGTTTGATGAATTACTCTAGCATTTGCCAGTGCACCAGGCATGCTGCTCGGCGTTCATGGATTGGCAAGCGTATCGTCGAGGCGCTGGATGAGGTGAATAAACTGATCGAGGAAGGGAGGCGGTTTAAGAAGTTTGGATTCAAGCCCTCACCGGAGATTGTCGAGCGCTTGCCTCAAACCAAGACATTTGGATTGGAGACCATGCTGGTTCAGCTGCATGATCTGCTTGAGAAGGCTGACTCGAACATAATTGGTATTTGGGGTCAAGGGGGTATTGGTAAGACGACACTACTACATGCCTTCAACAATGATCTTGAGAAGAAGGTCCATAACTACCAGGTTGTCATATTTATTGAAGTATCCAATTCAGAGACACTTGACACATTGGAGATGCAGAAGACCATCTCCGAACGTCTTAATTTACCATGGAATGAAGCAGAGATAACTGTGAAACGGGCCAGATTCCTTGTTAAGGCCTTGTCCAGGAAAAGATTTGTACTGCTTCTTGATGATGTAAGGAAGAAATTCCGGCTAGAAGATGTTGGCATCCCAACTCCAGACACCAACAGCCAGAGCAAGCTGATCCTAACTTCACGTTTCCAAGAACTAAGCACCGAGGCTTGTGCAGCAGTTGAATCACCTAGTCCCAGCAATGTTGTTAGGGATCATGCCATAGCAATAGCTCAAAGTTGTGGAGGTCTACCACTTGCGCTCAATGTCATTGGGACTGCTGTGGCAGGCTATGAAGAACCAAGAGATTGGAATTCAGCTGCTGATGCAATCAAAGAGAATATGAAGTTTGAAGGTGTTGATGAAATGTTTGCTACGCTGAAATACAGCTTCGACAGGCTCACACCTACTCAGCAACAGTGCTTTCTGTATTGCACTCTTTTTCCAGAGTATGGATCAATTAGTAAAGAGCATCTTGTTGATTATTGGTTGGCTGAAGGTTTGCTACTTGATGATCGCGAGAAGGGTAATCAGATAATCCGAAGTCTTATTTCAGCATGCTTGTTGCAGACCACTAGTTCAATGTCATCAAAGGTGAAAATGCACCACATAATCAGACATTTGGGGCTTTGGTTGGTTAACAGGGAAGATAGAAGTTTTGTTGTTAAAGCAGGGATGGCCTTAGATAATGCTCCACCAGCAATAGAATGGAAAGAAGCTACAAGGATCTCCATCATGTCTAATAACATCACAGAGCTTTCTTTCTCACCAAAATGCGAAAACCTCACCACACTGTTAATCCAGAATAACCCAAAGTTGAACAAGCTAGGCTGGGGTTTTTTCAAATATATGCGATCCTTGAAAGTGCTAGATCTATCACACACTGCAATTACTTCCATTCCAGAATGTGATAAATTGGTTGCATTGCAGCATCTCGACCTGTCATACACACATATTATGAGATTACCTGAGCGCCTATGGTTATTGAAAGAGTTGAGGCATCTGGACCTCAGTGTGACTGTTGCACTTGAAGATACTTTGAATAACTGCTCAAAGTTACACAAGTTGAGAGTGCTGAATCTCTTCCGCAGCCATTACGGGATTCGTGATGTTGATGACCTGAATCTGGATTCACTGAGGGATCTATTGTTTCTTGGTATCACTATTTATTCACAAGATGTGCTTAAGAAATTGAACGAGACCCATCCTTTGGCAAAATCAACGCATCGCTTGAACCTGAAGTATTGTGGAGATATGCAATCAATCAAAATTTCTGACTTTAACCATATGAAGCACCTTGAGGAGCTGCATGTCGAATCATGCTATGACCTGAATACACTGGTTGCCGATACTGAGTTGACGACTTCTTGCCTACAAGCACTGACCCTCTCCGTCCTTCCCTCATTAGAAAATGTCCTTGTTGCACCAATGCCCCATAATTTTCGGTACGTTCGCAAATTGTCCATTTCACAATGCCCCAAGTTGTTGAACATCACATGGGTCCGAAGACTTGAACTGCTTGAGAGGCTTGTCATATCCAATTGTGATGAGATGCTGACTATTGTTGAAGAAGCTAACAGTACTGAAGAGCAGCAATATGGAACACAAACAATAAAAATGCAGGGTTATTATTCTGAAGAACAAGACGATCATGCAATGGCTGAGAGTTCACGCAATGAGTGGAATGATGATTACCAAAGCGTCAATGGAGAATCAACCAATGGCGCAACGAGGCAACCTGACTTCCCAAAGTTGAGATCAATTGTGCTGACTGATGTGAAGAAGCTGAGAAGCATTTGCACGCCAAGAGATTTTCCCTGCCTTGAGACTCTTCGAGTGGAAGACTGCCCAAATTTGAGACGCATCCCACTGTGCAGCACTCACAACTGTGGTAAACTGAAGCAAATTTGTGGTTCATCTGATTGGTGGAAGAAACTGCTGTGGGAGGACAAGGAGGCGGTGGCACATATGGAGAGCAAGTACTTCATTCCAATCTGA</cdnaseq>

Protein Sequence

<aaseq>MADAISCLQPLCDCLDGTGLLDAAGREVASFLRLKSNWGDLDKARESLGAVERMVRGRVTAELNKLNVCDPQVELWLRRVDELKLGAIDEDYSSLMNYSSICQCTRHAARRSWIGKRIVEALDEVNKLIEEGRRFKKFGFKPSPEIVERLPQTKTFGLETMLVQLHDLLEKADSNIIGIWGQGGIGKTTLLHAFNNDLEKKVHNYQVVIFIEVSNSETLDTLEMQKTISERLNLPWNEAEITVKRARFLVKALSRKRFVLLLDDVRKKFRLEDVGIPTPDTNSQSKLILTSRFQELSTEACAAVESPSPSNVVRDHAIAIAQSCGGLPLALNVIGTAVAGYEEPRDWNSAADAIKENMKFEGVDEMFATLKYSFDRLTPTQQQCFLYCTLFPEYGSISKEHLVDYWLAEGLLLDDREKGNQIIRSLISACLLQTTSSMSSKVKMHHIIRHLGLWLVNREDRSFVVKAGMALDNAPPAIEWKEATRISIMSNNITELSFSPKCENLTTLLIQNNPKLNKLGWGFFKYMRSLKVLDLSHTAITSIPECDKLVALQHLDLSYTHIMRLPERLWLLKELRHLDLSVTVALEDTLNNCSKLHKLRVLNLFRSHYGIRDVDDLNLDSLRDLLFLGITIYSQDVLKKLNETHPLAKSTHRLNLKYCGDMQSIKISDFNHMKHLEELHVESCYDLNTLVADTELTTSCLQALTLSVLPSLENVLVAPMPHNFRYVRKLSISQCPKLLNITWVRRLELLERLVISNCDEMLTIVEEANSTEEQQYGTQTIKMQGYYSEEQDDHAMAESSRNEWNDDYQSVNGESTNGATRQPDFPKLRSIVLTDVKKLRSICTPRDFPCLETLRVEDCPNLRRIPLCSTHNCGKLKQICGSSDWWKKLLWEDKEAVAHMESKYFIPI</aaseq>

Gene Sequence

<dnaseqindica>1..618#1890..2156#2244..4085#ATGGCCGACGCGATCTCATGCCTGCAGCCACTGTGCGACTGCTTGGATGGCACCGGCCTGCTCGATGCCGCAGGAAGGGAGGTCGCCTCTTTCCTTCGGCTCAAATCAAATTGGGGTGATCTTGACAAGGCCAGGGAGAGCCTGGGGGCTGTTGAGAGGATGGTTCGAGGGCGGGTAACCGCGGAGTTAAACAAGCTGAACGTCTGTGATCCTCAGGTGGAGCTGTGGCTGAGGCGTGTCGATGAGCTGAAGCTGGGTGCCATTGATGAGGACTATAGCAGTTTGATGAATTACTCTAGCATTTGCCAGTGCACCAGGCATGCTGCTCGGCGTTCATGGATTGGCAAGCGTATCGTCGAGGCGCTGGATGAGGTGAATAAACTGATCGAGGAAGGGAGGCGGTTTAAGAAGTTTGGATTCAAGCCCTCACCGGAGATTGTCGAGCGCTTGCCTCAAACCAAGACATTTGGATTGGAGACCATGCTGGTTCAGCTGCATGATCTGCTTGAGAAGGCTGACTCGAACATAATTGGTATTTGGGGTCAAGGGGGTATTGGTAAGACGACACTACTACATGCCTTCAACAATGATCTTGAGAAGAAGGTCCATAACTACCAGGTAATGTGCTGTTTTCTCAAAAACTGCATTTTATTATGTATACGTTTATTTCTGGTTCTCTTTTGGGATGAATATAGATGATTGCTTCAATCATGATTTACATGTGGCACCATATTCAGAACTGTTGCATGGGAATATGGGACTGCTAGGGGGGTATGTATGATAATTTTCGTTTCAGTTATGCCAGGGGAATGTCATTGTTCTTGCACAAGAACACAATAGCGTGTCCCTTGCATGTATAGGATGGCTAAAATATTTTTCGCAAGTGCTAGTTCAAACTGAAAATTTTATAATCTCATAGGTAACATGATCAGGTACACACTAACCTTACATCTTAGAGATTTTTAAACACATCAGAGTTAATAAAGAGGAAGTAGCTAAATTTTGCATAATTGCACACTGAACATAGAAGAGTTAATCTAAAGAAGTATGGATTTAGCAAGCAAGTCAGGCCTTACTATCATACACCTGACAATAGTGTGTGGGAGACTGCCCGGAGTTGCTATTTTGATGAAATAGAGATACATATCTTATAATGTATCCAAATAGTTGGAAAGAAAGGTAGTAATGCATCCAAATGGTTGTCTCTTATCTAATTTTGTCCTGCAGCTGGGAAGGGTCAAACATTTTTTTAGATAATGTGCAACGCCCGGCCTCTGCATTCTAAGGTGAATGCACATTGCCATGTTGGCTCTCACAAATTTTAATTGGATGTACAAAACCCACCAAATATGCCAATACAATTGTATCTTTCTTTACTAAATTTTGTGAAGGGAAATCCATGGTGCAGGGCAGCACTTCCCTATGTAAGAAGATGCTATGTTGAACTCATACTATTAAGAGGTTTTCTCCAATCCTTTTCTAGTCGTTGTGGGGTATAGAGAGGTATACCTCTAGTGTTAGTCCAGATGTATATAACTCTTAGTTAGAACCAATATCTATACCTCTAAAAGAATGTAAGAACAAGTAACAAATATCTATAAAGATAAGTTTCCAATCCTCTTTCAACATGCAAGTTTAATTTTGGTACCTCCTTTTATGGAGAGGTATATCTCAAATATGGGGAGGTATATACCTCTCCAAGGATGGGAGAAAAATATCTATTATTAAAGTGGATACCGAGTTGCATTTTGCATAATTGCACACTGAGCATCGTACATACTTCTGTTCTACTTCTCTTCCATGTTGCATTTCAATAATATTTCTGAATTGCTTTTACCTTTGGAGTGAAAATCATGTTGCTTTTTTTTTTATTAAATTGGTTGTGCCAGGTTGTCATATTTATTGAAGTATCCAATTCAGAGACACTTGACACATTGGAGATGCAGAAGACCATCTCCGAACGTCTTAATTTACCATGGAATGAAGCAGAGATAACTGTGAAACGGGCCAGATTCCTTGTTAAGGCCTTGTCCAGGAAAAGATTTGTACTGCTTCTTGATGATGTAAGGAAGAAATTCCGGCTAGAAGATGTTGGCATCCCAACTCCAGACACCAACAGCCAGAGCAAGCTGATCCTAACTTCACGTTTCCAAGAAGTATGCTACCAGATGGGCGCATAGAGGAACTTGATTAAGATGGATCTTCTGGATAATGATGCTGCATGGAAACTGTTCTTGAGCAAGCTAAGCACCGAGGCTTGTGCAGCAGTTGAATCACCTAGTCCCAGCAATGTTGTTAGGGATCATGCCATAGCAATAGCTCAAAGTTGTGGAGGTCTACCACTTGCGCTCAATGTCATTGGGACTGCTGTGGCAGGCTATGAAGAACCAAGAGATTGGAATTCAGCTGCTGATGCAATCAAAGAGAATATGAAGTTTGAAGGTGTTGATGAAATGTTTGCTACGCTGAAATACAGCTTCGACAGGCTCACACCTACTCAGCAACAGTGCTTTCTGTATTGCACTCTTTTTCCAGAGTATGGATCAATTAGTAAAGAGCATCTTGTTGATTATTGGTTGGCTGAAGGTTTGCTACTTGATGATCGCGAGAAGGGTAATCAGATAATCCGAAGTCTTATTTCAGCATGCTTGTTGCAGACCACTAGTTCAATGTCATCAAAGGTGAAAATGCACCACATAATCAGACATTTGGGGCTTTGGTTGGTTAACAGGGAAGATAGAAGTTTTGTTGTTAAAGCAGGGATGGCCTTAGATAATGCTCCACCAGCAATAGAATGGAAAGAAGCTACAAGGATCTCCATCATGTCTAATAACATCACAGAGCTTTCTTTCTCACCAAAATGCGAAAACCTCACCACACTGTTAATCCAGAATAACCCAAAGTTGAACAAGCTAGGCTGGGGTTTTTTCAAATATATGCGATCCTTGAAAGTGCTAGATCTATCACACACTGCAATTACTTCCATTCCAGAATGTGATAAATTGGTTGCATTGCAGCATCTCGACCTGTCATACACACATATTATGAGATTACCTGAGCGCCTATGGTTATTGAAAGAGTTGAGGCATCTGGACCTCAGTGTGACTGTTGCACTTGAAGATACTTTGAATAACTGCTCAAAGTTACACAAGTTGAGAGTGCTGAATCTCTTCCGCAGCCATTACGGGATTCGTGATGTTGATGACCTGAATCTGGATTCACTGAGGGATCTATTGTTTCTTGGTATCACTATTTATTCACAAGATGTGCTTAAGAAATTGAACGAGACCCATCCTTTGGCAAAATCAACGCATCGCTTGAACCTGAAGTATTGTGGAGATATGCAATCAATCAAAATTTCTGACTTTAACCATATGAAGCACCTTGAGGAGCTGCATGTCGAATCATGCTATGACCTGAATACACTGGTTGCCGATACTGAGTTGACGACTTCTTGCCTACAAGCACTGACCCTCTCCGTCCTTCCCTCATTAGAAAATGTCCTTGTTGCACCAATGCCCCATAATTTTCGGTACGTTCGCAAATTGTCCATTTCACAATGCCCCAAGTTGTTGAACATCACATGGGTCCGAAGACTTGAACTGCTTGAGAGGCTTGTCATATCCAATTGTGATGAGATGCTGACTATTGTTGAAGAAGCTAACAGTACTGAAGAGCAGCAATATGGAACACAAACAATAAAAATGCAGGGTTATTATTCTGAAGAACAAGACGATCATGCAATGGCTGAGAGTTCACGCAATGAGTGGAATGATGATTACCAAAGCGTCAATGGAGAATCAACCAATGGCGCAACGAGGCAACCTGACTTCCCAAAGTTGAGATCAATTGTGCTGACTGATGTGAAGAAGCTGAGAAGCATTTGCACGCCAAGAGATTTTCCCTGCCTTGAGACTCTTCGAGTGGAAGACTGCCCAAATTTGAGACGCATCCCACTGTGCAGCACTCACAACTGTGGTAAACTGAAGCAAATTTGTGGTTCATCTGATTGGTGGAAGAAACTGCTGTGGGAGGACAAGGAGGCGGTGGCACATATGGAGAGCAAGTACTTCATTCCAATCTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA014719