BGIOSGA014758

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Revision as of 04:03, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA014758| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA014758, complete gene.| tag = OSIGBA0...")
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Gene Name

BGIOSGA014758

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA014758, complete gene.

LocusTag

OSIGBA0157A06.2

Ensembl Transcript ID

BGIOSGA014758-TA

Ensembl Protein ID

BGIOSGA014758-PA

Length

3707

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:23969447..23973153

Sequence Coding Region

23973111..23973153,23972588..23972664,23970624..23972426,23970242..23970428,23969447..23970156

Genome Context

<gbrowseImage1> name=IndicaChromosome04:23969447..23973153 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:23969447..23973153 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGACCAGCAAAAATGTGCTAACTGATAGAACTCACAGAGATGGCTCTCGAGTTCATAAAAGCCGGCAAGATGTCAATAGAACTGTTGATCCCAAAATAGGTTGTGTAGAGGACAAATTACAGGTAGTAGCTAGTACTAGGAATTCTTCAAGCAACAAATCAACCATATCTCCAATGAACAGATTAGTAGCAATGGAGATGTCCAAAGGAGTGGAATCAAAGAGGAAGCCACCTAGTGTCGTTGCCAGACTAATGGGGCTTGATGATGATCTACCTGCTAAAGAACCAGCATTACAATCTTCTAGAAGAAATTTGCGGAGAAGTCATTCACTTGATAATTTGGCAGCAACAAACAGGCCCCAACAACAGCAAGAGCAGCATTACAGCAGGACAACACCAAACATACACATAGGCCCCAAAGAGACAGTTGAATTTAAGGATGTGTACGAAGTCTCTGAAGATCCATTAAAGAGACATCATATTCTGGGGCAAAATTTTCCTTGGGAAAGATCTTCTGGGAACAAGAGTGACACTAGGATCGAAGCTGTTCGACAGAAGTTCATGGAAGCAAAACGCCTTGCCACAAATGAGAATCTCATCCATTCAAAGCAGTTTCAAGAAGCTCTTGAGGTTCTAAGTTCAAACAGGGAGTTGTTTCTGAAGTTTCTTGAAGAACCAAGCCCTGCTTTCTTGAAGCAGCTCGATGGACTTGACACAACGCCTGCACCGCCTCCGACGAAGCGTATTACAGTGTTGAAGCCAATCAAATCTGTTGAGAACAATGGAATAAGAGAAACCAGAACACACCAAGTTATTAATGAAGAAAATGAACTTGTGATGGGAAAGACTCACCAGAGATCTTACTCAGCAGATGACAACTTCTCCAAGTCAACTAGGATAGTGGTCCTAAAGCCTAGCCCTGGGAAGCCTAATAGAACAGGAGCCAGGCTAACTGCCCGAGCAGCTCCATCTGAACAAACTCGGCGGATCGACTTCCATGGAGGTTTACAAGATGATGCATCCATCCTAGGATCTAGGGAATTACTGCATGGTTCGGTTCAGCACATGCCAGAGAGTCGTCATCGGCGGGACGAATCCCTGATATCATCCACATATTCAAATGGGTATGGTGGAGATGAAAGCTCTTTCAGTGGGTCAGAAGTTGACTACATTGATGAAGGAGGTAGCCCAAGTGACTCAGATGCAGTCAGTCCAATGTCGCGACATTCATGGGATTACATCAGAAGACACAACAGTCCTCACTCAGCCTCTATTTTTAGCAGGGCCCATTCACATTCACCTGAGTCATCTGTGATCAGGGAAGCCAAAAAACGGCTTTCAGAGAGATGGGCAATGGTATCATACAATGAGATCAATCAAGAACAAGTACCTTTGCGAAGGAGCTCAACCACCTTGGGTGAGATGCTCTCCCTTCAAGTAGCTAAGAAAGAAGAAGCTGTTGCTGGGATAATTTCTGTTTCAAGCAACCGGTCAAGTGGCACAGAAAATGAGTTGGCCATGAAAGATGCATGCAAATCTACTTTAAGAGAGTACGATGAAAATGGGAAGAGCTCTCCAAGGAATTTAGCAAAATCAAAATCTGTCCCAGTGTCTTCATCTATATTTGACAACGTAGCAGTGAATGCTCAATCTGCAAATTCTGAAGGGACTCCGAAGGTGTTTACAAAGTCAGGTAGAGCAAAATTATCTTTCACGGGGAAAATATCAAGTTTTTTCTTCCCAGGCAATAAAAGGCCAACAAAAGAGAAAACTTCCCTCTCATCTGATAGCTCAGGCGAGATATTTGGATGTATCGGGCACATGGTGCCGCAGTCTGATCACAATCTTGGTCCTGATGAACAAATGGCTTTTTGCAAGGATGAAGCTGATAATTCCACCAATCATGCTCCCTGTTCTACAAAAGATGCTGGTTCCATAGAAGTACCTGTATCTTCTGACTGTGTAAGTGGAGATGTTGATGAAGTAAAATCAAATGGTGATCTAAAATCTATCCACGATGAGACTAGTCCTACTTCAATTCTTGACACGGTTTTTGAAGATAGCAACAGTAATGAACCTGAATCTTCAAGAAGAACTTCCTGCACCGAGAGGGTTGCCTTACGATGCCCTGCTATCGATTCTGTTGCCCGCTCATTTTCATGGGAAGATACCAACTCAGGTTCTCCGTTGCTAGGTGGCCTAAAGCATTCCAATGTAGATGATGCCGATTATGATGATGATGAACTAAAATGTTACTCTCTTGTACAAGAGATAGTATCATCTGCTGGATTATGCCATCTGCAGTTAAGTATGGTCTTCACAGGGTGGTACCTGCCTGAATCCCCCCTTGATCCTGCATTGTGTGACAAGTTCTTGGATCGCAAGGAGGAGGATGCTAAATCGAGGGAGCGAAGGTCACACCAAAAGCTCATTTTCGATTGTGTAAATATGGCCTTGGTTGAGATTGGCCAGGATACGTTACTATGCAGCTATCCATGGAGTAGAGCATGCTTAAGAACATGGAGGGAGAAACTATCTGAAACCTTGGGTGAAGAAGTATGGAACATCGTGAGCGATTGGCTTTATGGAGATGGGAGCTTTGCGGCAAACAAGGACGACAATGCTGGAATAATCTTGGAAAGAATTATGCAGGAGGAGGTGGAAGGGAAGGGTTGGATTAAGCTATTGACAATGGAAACAGATGAGATCACTGAGCAGATTGCCAGTGAAGTGTTGGAGGACATTGTCACAGATTCTGTGGAGCATCTGTCAATTTGTTGTTCAGAGCATGGCATTTCAATGCCAGTAGCAAATCTGTAG</cdnaseq>

Protein Sequence

<aaseq>MTSKNVLTDRTHRDGSRVHKSRQDVNRTVDPKIGCVEDKLQVVASTRNSSSNKSTISPMNRLVAMEMSKGVESKRKPPSVVARLMGLDDDLPAKEPALQSSRRNLRRSHSLDNLAATNRPQQQQEQHYSRTTPNIHIGPKETVEFKDVYEVSEDPLKRHHILGQNFPWERSSGNKSDTRIEAVRQKFMEAKRLATNENLIHSKQFQEALEVLSSNRELFLKFLEEPSPAFLKQLDGLDTTPAPPPTKRITVLKPIKSVENNGIRETRTHQVINEENELVMGKTHQRSYSADDNFSKSTRIVVLKPSPGKPNRTGARLTARAAPSEQTRRIDFHGGLQDDASILGSRELLHGSVQHMPESRHRRDESLISSTYSNGYGGDESSFSGSEVDYIDEGGSPSDSDAVSPMSRHSWDYIRRHNSPHSASIFSRAHSHSPESSVIREAKKRLSERWAMVSYNEINQEQVPLRRSSTTLGEMLSLQVAKKEEAVAGIISVSSNRSSGTENELAMKDACKSTLREYDENGKSSPRNLAKSKSVPVSSSIFDNVAVNAQSANSEGTPKVFTKSGRAKLSFTGKISSFFFPGNKRPTKEKTSLSSDSSGEIFGCIGHMVPQSDHNLGPDEQMAFCKDEADNSTNHAPCSTKDAGSIEVPVSSDCVSGDVDEVKSNGDLKSIHDETSPTSILDTVFEDSNSNEPESSRRTSCTERVALRCPAIDSVARSFSWEDTNSGSPLLGGLKHSNVDDADYDDDELKCYSLVQEIVSSAGLCHLQLSMVFTGWYLPESPLDPALCDKFLDRKEEDAKSRERRSHQKLIFDCVNMALVEIGQDTLLCSYPWSRACLRTWREKLSETLGEEVWNIVSDWLYGDGSFAANKDDNAGIILERIMQEEVEGKGWIKLLTMETDEITEQIASEVLEDIVTDSVEHLSICCSEHGISMPVANL</aaseq>

Gene Sequence

<dnaseqindica>1..43#490..566#728..2530#2726..2912#2998..3707#ATGACCAGCAAAAATGTGCTAACTGATAGAACTCACAGAGATGGTACAAAAATTTCTTCCACTTTTTCTTTGAAGTGCTGCTTAAGCAAGTGATCTGCAACTCCTGATTTTGCTTTTTTTCGCCGGGTCGGCAACTCCTGATTTTGCTTTCATAATGCATATGAATTTATACTTTAGAGTTACTTGTGATAGACGGGCTAGATGGCATTGGCATTGTTTGAATAATGATTCATTTGCATAATGTTAGATGGTGGTCTCCCTTTAGACAATGTCATGTTTGATTGTTTGTAGATGATGACACATTTGTCTTTTCTTTCTGGATGTTTTCCTCTTCTTGGATTCGAAAATAATTCAAAAGAGCTCTTGCTATTTTTGTTGCAAGACACTGACCTTAAAAATCAAACTGACTGTGTTCTTTATTTGTTAGTTTGTATTGATAGACATAAGTGTTTTCTGCCTAATGTTAATTGTTCAGCTTGCATCTTTCAGGCTCTCGAGTTCATAAAAGCCGGCAAGATGTCAATAGAACTGTTGATCCCAAAATAGGTTGTGTAGAGGACAAATTAGTGAGTATCATGTCATTTGCCCTATTCTAGCATATGTAATTTCAATTTATCGTAGGTGTCAGATTGTCCTTCTAAATATATATCTGGACAGCACTTACACAATTTTGTAAATTTCAGAAAGTATGTCTTCATTTTTTTTTCTAATATAGTATTCATTGCAGCAGGTAGTAGCTAGTACTAGGAATTCTTCAAGCAACAAATCAACCATATCTCCAATGAACAGATTAGTAGCAATGGAGATGTCCAAAGGAGTGGAATCAAAGAGGAAGCCACCTAGTGTCGTTGCCAGACTAATGGGGCTTGATGATGATCTACCTGCTAAAGAACCAGCATTACAATCTTCTAGAAGAAATTTGCGGAGAAGTCATTCACTTGATAATTTGGCAGCAACAAACAGGCCCCAACAACAGCAAGAGCAGCATTACAGCAGGACAACACCAAACATACACATAGGCCCCAAAGAGACAGTTGAATTTAAGGATGTGTACGAAGTCTCTGAAGATCCATTAAAGAGACATCATATTCTGGGGCAAAATTTTCCTTGGGAAAGATCTTCTGGGAACAAGAGTGACACTAGGATCGAAGCTGTTCGACAGAAGTTCATGGAAGCAAAACGCCTTGCCACAAATGAGAATCTCATCCATTCAAAGCAGTTTCAAGAAGCTCTTGAGGTTCTAAGTTCAAACAGGGAGTTGTTTCTGAAGTTTCTTGAAGAACCAAGCCCTGCTTTCTTGAAGCAGCTCGATGGACTTGACACAACGCCTGCACCGCCTCCGACGAAGCGTATTACAGTGTTGAAGCCAATCAAATCTGTTGAGAACAATGGAATAAGAGAAACCAGAACACACCAAGTTATTAATGAAGAAAATGAACTTGTGATGGGAAAGACTCACCAGAGATCTTACTCAGCAGATGACAACTTCTCCAAGTCAACTAGGATAGTGGTCCTAAAGCCTAGCCCTGGGAAGCCTAATAGAACAGGAGCCAGGCTAACTGCCCGAGCAGCTCCATCTGAACAAACTCGGCGGATCGACTTCCATGGAGGTTTACAAGATGATGCATCCATCCTAGGATCTAGGGAATTACTGCATGGTTCGGTTCAGCACATGCCAGAGAGTCGTCATCGGCGGGACGAATCCCTGATATCATCCACATATTCAAATGGGTATGGTGGAGATGAAAGCTCTTTCAGTGGGTCAGAAGTTGACTACATTGATGAAGGAGGTAGCCCAAGTGACTCAGATGCAGTCAGTCCAATGTCGCGACATTCATGGGATTACATCAGAAGACACAACAGTCCTCACTCAGCCTCTATTTTTAGCAGGGCCCATTCACATTCACCTGAGTCATCTGTGATCAGGGAAGCCAAAAAACGGCTTTCAGAGAGATGGGCAATGGTATCATACAATGAGATCAATCAAGAACAAGTACCTTTGCGAAGGAGCTCAACCACCTTGGGTGAGATGCTCTCCCTTCAAGTAGCTAAGAAAGAAGAAGCTGTTGCTGGGATAATTTCTGTTTCAAGCAACCGGTCAAGTGGCACAGAAAATGAGTTGGCCATGAAAGATGCATGCAAATCTACTTTAAGAGAGTACGATGAAAATGGGAAGAGCTCTCCAAGGAATTTAGCAAAATCAAAATCTGTCCCAGTGTCTTCATCTATATTTGACAACGTAGCAGTGAATGCTCAATCTGCAAATTCTGAAGGGACTCCGAAGGTGTTTACAAAGTCAGGTAGAGCAAAATTATCTTTCACGGGGAAAATATCAAGTTTTTTCTTCCCAGGCAATAAAAGGCCAACAAAAGAGAAAACTTCCCTCTCATCTGATAGCTCAGGCGAGATATTTGGATGTATCGGGCACATGGTGCCGCAGTCTGATCACAATCTTGGTCCTGATGAACAAATGGCTTTTTGCAAGGATGAAGCTGATAATTCCACCAATCATGCTCCCTGTTCTACAAAAGTACGCACTTATCTCAAATTATATTCATGCCTTACTAGTTTTTTTTAATTATCAATGCATTGGTCTACCGGATTCTCCTTTTCCACCATGGCCTTGTGAAGCTCTTTGATTATCTCTTCCCGAGTTCCTACAAAAGAATACTGCTTTGTACTCCAGTTTTCTTACTCTCAGTAACTAATAAGAGACATGTAGCAGGATGCTGGTTCCATAGAAGTACCTGTATCTTCTGACTGTGTAAGTGGAGATGTTGATGAAGTAAAATCAAATGGTGATCTAAAATCTATCCACGATGAGACTAGTCCTACTTCAATTCTTGACACGGTTTTTGAAGATAGCAACAGTAATGAACCTGAATCTTCAAGAAGAACTTCCTGCACCGAGAGTAAGTTTTGTCACCTGTTCTGACCCTTGAGCTTACCATTGCTGTCTTCTATTATGTACTAACTACATGTTCTCTATGTCTTTAGGGGTTGCCTTACGATGCCCTGCTATCGATTCTGTTGCCCGCTCATTTTCATGGGAAGATACCAACTCAGGTTCTCCGTTGCTAGGTGGCCTAAAGCATTCCAATGTAGATGATGCCGATTATGATGATGATGAACTAAAATGTTACTCTCTTGTACAAGAGATAGTATCATCTGCTGGATTATGCCATCTGCAGTTAAGTATGGTCTTCACAGGGTGGTACCTGCCTGAATCCCCCCTTGATCCTGCATTGTGTGACAAGTTCTTGGATCGCAAGGAGGAGGATGCTAAATCGAGGGAGCGAAGGTCACACCAAAAGCTCATTTTCGATTGTGTAAATATGGCCTTGGTTGAGATTGGCCAGGATACGTTACTATGCAGCTATCCATGGAGTAGAGCATGCTTAAGAACATGGAGGGAGAAACTATCTGAAACCTTGGGTGAAGAAGTATGGAACATCGTGAGCGATTGGCTTTATGGAGATGGGAGCTTTGCGGCAAACAAGGACGACAATGCTGGAATAATCTTGGAAAGAATTATGCAGGAGGAGGTGGAAGGGAAGGGTTGGATTAAGCTATTGACAATGGAAACAGATGAGATCACTGAGCAGATTGCCAGTGAAGTGTTGGAGGACATTGTCACAGATTCTGTGGAGCATCTGTCAATTTGTTGTTCAGAGCATGGCATTTCAATGCCAGTAGCAAATCTGTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA014758