Os12g0621700

From RiceWiki
Revision as of 10:37, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os12g0621700| Description = Conserved hypothetical protein| Version = NM_001073836.1 GI:115489633 GeneID:4352823| Length = 5762 bp| Definition ...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os12g0621700

Description

Conserved hypothetical protein

Version

NM_001073836.1 GI:115489633 GeneID:4352823

Length

5762 bp

Definition

Oryza sativa Japonica Group Os12g0621700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:26756730..26762491

Sequence Coding Region

26757384..26757485,26758081..26758154,26758235..26758352,26758439..26758509,26758596..26758761
,26758838..26759037,26759561..26759772,26759849..26759944,26760296..26760414
,26760844..26760945,26761036..26761145,26761232..26761319,26761527..26761726
,26761808..26762012

Expression

GEO Profiles:Os12g0621700

Genome Context

<gbrowseImage1> name=NC_008405:26756730..26762491 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:26756730..26762491 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggctcaagccgctgttcaatcttctctgaatggtgacttgttgattgggagggccgcgggagttccgaggatgaagaggaagaccccctctgaactcagaggagagcaattgaagcggcgtgcttctgacaagcctgctaatgaccaatcactccattctgcggcatttgatagggcaagcaatgggtttcggaacccagagcaatcaaaaatatcgaaatacatcagtactcgtgttacagaggtgttcccagtaaaaaaatctagaaaccttggaaaggaaaacttcaagaataatgagaaggctcccaagtctgctgatgctgtgacaacttctgattttgcatcaccttcactcccatgtggttatggtgactctgctaagttggactctgctgttccatcacatactgaggcagctaaaccaagttttaggaaagttgagaaatgcagtgaaaatgctttgcggagtgtatctgagctccatattggtgatgagcagcagtctggcactaataaatttgatatggaaaaagtactcaaaggttttggagctcgtgatgcttttgtggcctctaagctcactgacccaaacatacaagttggtgttgtaccctcgaaatctttggatttgtgcccttctgagatcgctgttccaggaaaaagagctcctttggatctcaccctgaagactactttgcaatttgtttcatcatcttctgtaaagtggtgtcacaagataagtacaagttttggtaggagcagcattgtaggacccattgcccaaagttatcatcatgggtgtcaaaattcaggatgctcaaggcctgagagaaacaaggaattcttgttctcaaaggcactacaatcatgggtatatccacaatccttgttgcctgcttccatcatatctgcaatggtatcatcaactgtacgaggagaaagtgattttctcctcaaaaggcatcaggactgggaagattcatttcagaatctttactacatgctccggaagaatctgttgaatattttttatgtttatacgccacaatttgttgctctcttcatcggtggaaattgtttggacaagaagcagacctgtaatgcgtacctatcacaatcaacacgtgggatacgatcattgctgcgaagacatggtgtttgtttttctatgcctctttgcaacactgaagtggagcaggttacagaggatgacctgattgaactttcagaaatccaaaagcgcaatctaggccaggcgctccacattgacgctatgtctgaagtcgacaacaccacacaatcgcttctttcatttgtgggcaataagagtgttcatggtttatatgacttcttgttgaactacaagtcattcttaaattctctatctgccacagatatcccggtgttatattccccggtgccgtttcaaaatggctgcctccatattccagaggtgaaatgcaaggagatgaggaaggcagatataggcctggtttcaggtgggtttgatgcaggagagcctggatctactttcgcttctttaacgggcaatatctgctatagcatggaaataaaggatcccgtacttcctccatgggttgtttctggaatctgcgctgcaatgagctctgatgcaaatagcttcgatttaatgatggcaacagagccttcgtcgatgggcttaaacgctgccttgagctgcgtaagctcaaattcccagtccaaggcacattcctctgaaggctgtgaatcattgggcatccctgaggccacattggttccctccttgcgatctgcatcttctctgcggcgcctcagctacaaggatggcgagtacatcgcatacacaacggtgtga</cdnaseq>

Protein Sequence

<aaseq>MAQAAVQSSLNGDLLIGRAAGVPRMKRKTPSELRGEQLKRRASD KPANDQSLHSAAFDRASNGFRNPEQSKISKYISTRVTEVFPVKKSRNLGKENFKNNEK APKSADAVTTSDFASPSLPCGYGDSAKLDSAVPSHTEAAKPSFRKVEKCSENALRSVS ELHIGDEQQSGTNKFDMEKVLKGFGARDAFVASKLTDPNIQVGVVPSKSLDLCPSEIA VPGKRAPLDLTLKTTLQFVSSSSVKWCHKISTSFGRSSIVGPIAQSYHHGCQNSGCSR PERNKEFLFSKALQSWVYPQSLLPASIISAMVSSTVRGESDFLLKRHQDWEDSFQNLY YMLRKNLLNIFYVYTPQFVALFIGGNCLDKKQTCNAYLSQSTRGIRSLLRRHGVCFSM PLCNTEVEQVTEDDLIELSEIQKRNLGQALHIDAMSEVDNTTQSLLSFVGNKSVHGLY DFLLNYKSFLNSLSATDIPVLYSPVPFQNGCLHIPEVKCKEMRKADIGLVSGGFDAGE PGSTFASLTGNICYSMEIKDPVLPPWVVSGICAAMSSDANSFDLMMATEPSSMGLNAA LSCVSSNSQSKAHSSEGCESLGIPEATLVPSLRSASSLRRLSYKDGEYIAYTTV</aaseq>

Gene Sequence

<dnaseqindica>655..756#1352..1425#1506..1623#1710..1780#1867..2032#2109..2308#2832..3043#3120..3215#3567..3685#4115..4216#4307..4416#4503..4590#4798..4997#5079..5283#gagggttcaaactcctcccccaaaatccaatccccaatccgcgccgcccccattcgtctccccttcttttcaaatcccctctcctctcctctctcctcgccgccaccgcctacctacctccgccgcaggaagcttccagaaggttccgggaggccgcggcggagaggcttcaggtgagctctcccctttgccttcctctccagtctccatccggtcgagatttgacccctcgctgccgagcccaccgacgctcgccgccgtcgagatcccagctgctcgctcgcctcctgggccgcccagccgctggatcggggtctttgctgttgatttttcttttcatgccaaatgcgggggccatggttagggtctagtgcccaatggcggcgcgccgcggtttgattcgagggcactgcactgctgcgagttgcgcagctcagatccaatcctctcacttgcttgggatttttatgaactagatccatacccaacctgctagtgcaactgctagtggatagtaacaaatttgctctaacttaaacggttttttttttttggtcacatggttcttcctttaggggtacaggttgagggagaggaaggtatggtttggtgagtcacaggaagggatgcggagctagaagattggaggctacaatggctcaagccgctgttcaatcttctctgaatggtgacttgttgattgggagggccgcgggagttccgaggatgaagaggaagaccccctctgaactcagagtaatttgcctttaacctttatatgtgtcaactatgccttctttattttcaccatgatgtgatattagatgagatatttggtgaaaatgtgtgtgcggtttcaagagatttccatttgataaaaaagtattctctaatactgttctgttccagataccaagaatgcacattaactatactttgtataagcaaacctgcaatatttaaggacaattcatatccttgcaactttccatggtgcagccctgatgcaatgagcatgatatgttatgccatatgaaaagactgacgaagaccattcccaacgcatctcaaaaaattactatatcattttactgcatcaagtgatatttgttttacttagctaatgctagagaagagtaataacatagtcacttcaaactgcatttaggataacttctgttatatatgcatgtttcctttccatggctgaattgttaatgacaattagttcaatggaggccagtgtaagcacacacattacttattgctgctctcttgagtgctgctttaggcataaaacagtacagctgcttatgaatgctgaaaatgttccgataattacttattgcagggagagcaattgaagcggcgtgcttctgacaagcctgctaatgaccaatcactccattctgcggcatttgataggtagctaatctgcaatctgttttagtgatgttccactttgcttgtatgaaaaacttaataattctattatcgcggtgtagggcaagcaatgggtttcggaacccagagcaatcaaaaatatcgaaatacatcagtactcgtgttacagaggtgttcccagtaaaaaaatctagaaaccttggaaaggaaaacttcaaggtcagacattgtgacatcattcacttttatggaccttaaattgttcagtgctaaatgccacatcttgaaactaggatgctttgcagaataatgagaaggctcccaagtctgctgatgctgtgacaacttctgattttgcatcaccttcactcccatggtaattatttgactggataattttatgtacttgatgttttgcatcgtgtttatgttcttatgtggattgtttttgcgaaaattcagtggttatggtgactctgctaagttggactctgctgttccatcacatactgaggcagctaaaccaagttttaggaaagttgagaaatgcagtgaaaatgctttgcggagtgtatctgagctccatattggtgatgagcagcagtctggcactaataaatttgatatggtaaggagcaccaatctatctagatcatcttagtatatgttgtttgtgtgctaatatttctaatgctttttgataggaaaaagtactcaaaggttttggagctcgtgatgcttttgtggcctctaagctcactgacccaaacatacaagttggtgttgtaccctcgaaatctttggatttgtgcccttctgagatcgctgttccaggaaaaagagctcctttggatctcaccctgaagactactttgcaatttgtttcatcatcttctgtaaagtggtgggtattttactctttcttgccctttcagcttgtcagttggatgacatatccatctcaaagtaacagttgtctgtttgcttgaattggtagcatatcttaaacctgtaactataacctccttgaaaacaggtttcattttaggtcttaaacatggcatgctaatatactcatagaacaaggaataacaacttagttttccgcgcacataaatctaacaccagtattatatttaacccaaaagaaagatgacaggcatttgcaaaattgaaattatatatatattttttaaaaagcatctggtttgaaatggcagagtatttggcaaatggttatgcaccattataatacctcaaataatattacatctatagtagtcccaatagatggcatctacgaattaggggaatggaaatcaaaacttctgcttttggagtgttatcatgaaatgtggctgttttcatttgaggttttctgcatagaagtgaaaaattctcctgtcaataactcttgtatgttacaggtgtcacaagataagtacaagttttggtaggagcagcattgtaggacccattgcccaaagttatcatcatgggtgtcaaaattcaggatgctcaaggcctgagagaaacaaggaattcttgttctcaaaggcactacaatcatgggtatatccacaatccttgttgcctgcttccatcatatctgcaatggtatcatcaactgtacgaggaggtaatatcaaaacctgaaacaatcctgtaatgttttgtggatgtaactaaaatgatatattcctctggtcatgtagaaagtgattttctcctcaaaaggcatcaggactgggaagattcatttcagaatctttactacatgctccggaagaatctgttgaatattttttatggtattttcatgctccttgaatccaactgattcatagtaagctacatagttggaaaaatgtaatattatggcatttgtttagtgtttcacatggtctgcttgcttttgtgctgttgtgcactaaaaaaattgctgctgcaaggtttttatagcaaaaagtttagttggacacgatagttatacaataagtaaaaacaccatctatctaaggaaaactatgaatttaaatttagtgccaacacatgtgccttttgctcaaggcctcatttgcagttttcaaatatgagatgttttattagactatctctgaattactcattaattacaatgaacatttgctttattgttctagtttatacgccacaatttgttgctctcttcatcggtggaaattgtttggacaagaagcagacctgtaatgcgtacctatcacaatcaacacgtgggatacgatcattgctgcgaagacatgtgagttctttctgtttctctatgcaattacaattcgcaatgcacacattctcctcttttttttttcataaataagacaaagcactacattaatctgttgttgctgatcaaccattctgtgaggcgtggtttgactatagcatcgatccattatgtttaggcctggtttgagtaaagcattcataagtgattgtcctttttctgaaagcaacttcggtagttcagtttgttgtttgaactgaattagttttctatagttgtttagtataattatgaaccgagacatgattttggtattatgatctctaaaggcatcaactgctggaggcaattcaatcttaagatcccatgccttttcagctttgtactagcttttaggaattgttggttgcttggtatcattaaccatagtactttgcattgttgcagggtgtttgtttttctatgcctctttgcaacactgaagtggagcaggttacagaggatgacctgattgaactttcagaaatccaaaagcgcaatctaggccaggtttcattttgccctcctatcatttcccttgtttgtgttaacggggttgcagctactgactggttgtcaataaaattgtccaacttgcaggcgctccacattgacgctatgtctgaagtcgacaacaccacacaatcgcttctttcatttgtgggcaataagagtgttcatggtttatatgacttcttgttgaactacaagtaggttgcttaaaacctttgctgatcatcctattacaatactcccaaaattttctagctgtataacatgttcttgttgttttcaggtcattcttaaattctctatctgccacagatatcccggtgttatattccccggtgccgtttcaaaatggctgcctccatattccagaggtaatttgactcgtttcatttctgtcaacttaaaatttctccctgctatcatatggcaagtttcagtattctcattttttgtaccagttcacttcaagtattttcattaaaacctttctgaaaactatgtgtctaactgtctaaaggttgccctgtacaatagtaaagctgatttagaggtctgatcttctgagcacgcttttgcaggtgaaatgcaaggagatgaggaaggcagatataggcctggtttcaggtgggtttgatgcaggagagcctggatctactttcgcttctttaacgggcaatatctgctatagcatggaaataaaggatcccgtacttcctccatgggttgtttctggaatctgcgctgcaatgagctctgatgcaaatagcttcgatttaatgtacgtgccatcatcttccccgatgcagtttctccacctcttgccatgtgttaaataaatcattctcatttcctctttcaggatggcaacagagccttcgtcgatgggcttaaacgctgccttgagctgcgtaagctcaaattcccagtccaaggcacattcctctgaaggctgtgaatcattgggcatccctgaggccacattggttccctccttgcgatctgcatcttctctgcggcgcctcagctacaaggatggcgagtacatcgcatacacaacggtgtgagctacaacgcaacacctcgaagccatagctgggaagcaagacaagtactcctattccagtcaagtgcagccacttttgatgttctacgactaccaatgggggttctatctggttgagctcctcccgtcaagaagcctcaatgcctcgtccatgagacaagcaaggcaggcaggcagagaagctgttagctgctgctggttttgtggttttttttgcaaggcaatgtgtccagtatctggaatcatctaactgtttttgggtgagcctgtagattatctacaggacaatgagctgctcttgaatggtgcagtaatttatgggattgtacagtgtatttgatgcccttgacagtgcatccttcgatgactgatgggggggggggggggggtagtgaggagggggaagtgactcttttatggcgttctctgctgtcatcctctctagtctgcaagataattgcgcttgatctttaacgttgc</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0621700, RefSeq:Os12g0621700